RNA–Protein interactions for RNA: ENST00000505399.2

FBXO38-209, Transcript of F-box protein 38, humanhuman

TSL 5

Gene FBXO38, Length 843 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO38-209ENST00000505399 HMGXB3Q12766 1538 aa9.52□□□□□ -0.88
FBXO38-209ENST00000505399 C19orf67A6NJJ6 358 aa9.49□□□□□ -0.89
FBXO38-209ENST00000505399 PRR29P0C7W0 189 aa9.46□□□□□ -0.9
FBXO38-209ENST00000505399 CC2D2AQ9P2K1 1620 aa9.45□□□□□ -0.9
FBXO38-209ENST00000505399 CHADLQ6NUI6 762 aa9.42□□□□□ -0.9
FBXO38-209ENST00000505399 FAM9AQ8IZU1 332 aaPredicted RBP9.41□□□□□ -0.9
FBXO38-209ENST00000505399 EHMT2Q96KQ7 1210 aa9.4□□□□□ -0.9
FBXO38-209ENST00000505399 GABBR2O75899 941 aa9.38□□□□□ -0.91
FBXO38-209ENST00000505399 WRNQ14191 1432 aaPredicted RBP eCLIP9.38□□□□□ -0.91
FBXO38-209ENST00000505399 EEA1Q15075 1411 aa9.36□□□□□ -0.91
FBXO38-209ENST00000505399 CADPSQ9ULU8 1353 aa9.36□□□□□ -0.91
FBXO38-209ENST00000505399 CFTRP13569 1480 aa9.32□□□□□ -0.92
FBXO38-209ENST00000505399 ABCC8Q09428 1581 aa9.32□□□□□ -0.92
FBXO38-209ENST00000505399 FARP1Q9Y4F1 1045 aaPredicted RBP9.31□□□□□ -0.92
FBXO38-209ENST00000505399 LOC105371045A0A1W2PR82 267 aa9.3□□□□□ -0.92
FBXO38-209ENST00000505399 PRDM2Q13029 1718 aa9.29□□□□□ -0.92
FBXO38-209ENST00000505399 CD44P16070 742 aaKnown RBP9.28□□□□□ -0.92
FBXO38-209ENST00000505399 UBTFP17480 764 aaKnown RBP9.28□□□□□ -0.92
FBXO38-209ENST00000505399 PDS5BQ9NTI5 1447 aa9.28□□□□□ -0.92
FBXO38-209ENST00000505399 CLCN6P51797 869 aa9.27□□□□□ -0.93
FBXO38-209ENST00000505399 LAMC3Q9Y6N6 1575 aa9.26□□□□□ -0.93
FBXO38-209ENST00000505399 STAG3Q9UJ98 1225 aa9.25□□□□□ -0.93
FBXO38-209ENST00000505399 LHX8Q68G74 356 aa9.24□□□□□ -0.93
FBXO38-209ENST00000505399 TOP2BQ02880 1626 aa9.23□□□□□ -0.93
FBXO38-209ENST00000505399 FANCD2Q9BXW9 1451 aa9.22□□□□□ -0.93
FBXO38-209ENST00000505399 KIF27Q86VH2 1401 aa9.21□□□□□ -0.94
FBXO38-209ENST00000505399 CEP164Q9UPV0 1460 aa9.21□□□□□ -0.94
FBXO38-209ENST00000505399 BIVM-ERCC5R4GMW8 1640 aa9.2□□□□□ -0.94
FBXO38-209ENST00000505399 SYNJ1O43426 1573 aa9.19□□□□□ -0.94
FBXO38-209ENST00000505399 SOGA1O94964 1423 aa9.17□□□□□ -0.94
FBXO38-209ENST00000505399 GOLGA3Q08378 1498 aa9.16□□□□□ -0.94
FBXO38-209ENST00000505399 SPDYE4A6NLX3 237 aa9.15□□□□□ -0.94
FBXO38-209ENST00000505399 CREBZFQ9NS37 354 aa9.15□□□□□ -0.94
FBXO38-209ENST00000505399 TNIKQ9UKE5 1360 aa9.14□□□□□ -0.95
FBXO38-209ENST00000505399 POTEIP0CG38 1075 aa9.14□□□□□ -0.95
FBXO38-209ENST00000505399 ZNF579Q8NAF0 562 aaKnown RBP9.14□□□□□ -0.95
FBXO38-209ENST00000505399 CUX1P39880 1505 aa9.14□□□□□ -0.95
FBXO38-209ENST00000505399 DNMBPQ6XZF7 1577 aa9.13□□□□□ -0.95
FBXO38-209ENST00000505399 DCBLD2Q96PD2 775 aa9.13□□□□□ -0.95
FBXO38-209ENST00000505399 ZRANB1Q9UGI0 708 aa9.13□□□□□ -0.95
FBXO38-209ENST00000505399 ERCC6Q03468 1493 aa9.13□□□□□ -0.95
FBXO38-209ENST00000505399 NESP48681 1621 aa9.13□□□□□ -0.95
FBXO38-209ENST00000505399 CUX2O14529 1486 aa9.11□□□□□ -0.95
FBXO38-209ENST00000505399 FGD5Q6ZNL6 1462 aa9.1□□□□□ -0.95
FBXO38-209ENST00000505399 TOPBP1Q92547 1522 aa9.1□□□□□ -0.95
FBXO38-209ENST00000505399 KIF21BO75037 1637 aa9.09□□□□□ -0.95
FBXO38-209ENST00000505399 TRIM26Q12899 539 aaPredicted RBP9.08□□□□□ -0.96
FBXO38-209ENST00000505399 RUSC2Q8N2Y8 1516 aa9.08□□□□□ -0.96
FBXO38-209ENST00000505399 PAK3O75914 559 aaPredicted RBP9.07□□□□□ -0.96
FBXO38-209ENST00000505399 RANGAP1P46060 587 aaPredicted RBP9.06□□□□□ -0.96
FBXO38-209ENST00000505399 MRC2Q9UBG0 1479 aa9.06□□□□□ -0.96
FBXO38-209ENST00000505399 CARMIL1Q5VZK9 1371 aa9.05□□□□□ -0.96
FBXO38-209ENST00000505399 NPM1P06748 294 aaKnown RBP eCLIP9.05□□□□□ -0.96
FBXO38-209ENST00000505399 ERICH3Q5RHP9 1530 aa9.05□□□□□ -0.96
FBXO38-209ENST00000505399 CEP162Q5TB80 1403 aa9.05□□□□□ -0.96
FBXO38-209ENST00000505399 KIF21AQ7Z4S6 1674 aa9.04□□□□□ -0.96
FBXO38-209ENST00000505399 RAPGEF2Q9Y4G8 1499 aa9.03□□□□□ -0.96
FBXO38-209ENST00000505399 ABCA10Q8WWZ4 1543 aa9.03□□□□□ -0.96
FBXO38-209ENST00000505399 POLA1P09884 1462 aaPredicted RBP9.02□□□□□ -0.96
FBXO38-209ENST00000505399 PCGF6Q9BYE7 350 aa9.02□□□□□ -0.97
FBXO38-209ENST00000505399 CLIP1P30622 1438 aa9.02□□□□□ -0.97
FBXO38-209ENST00000505399 IGF1RP08069 1367 aa9.01□□□□□ -0.97
FBXO38-209ENST00000505399 URB2Q14146 1524 aaKnown RBP9.01□□□□□ -0.97
FBXO38-209ENST00000505399 GALR2O43603 387 aaPredicted RBP9□□□□□ -0.97
FBXO38-209ENST00000505399 PRXQ9BXM0 1461 aa9□□□□□ -0.97
FBXO38-209ENST00000505399 RAD54L2Q9Y4B4 1467 aa9□□□□□ -0.97
FBXO38-209ENST00000505399 GAPVD1Q14C86 1478 aa8.99□□□□□ -0.97
FBXO38-209ENST00000505399 IFT140Q96RY7 1462 aa8.99□□□□□ -0.97
FBXO38-209ENST00000505399 CUL7Q14999 1698 aa8.99□□□□□ -0.97
FBXO38-209ENST00000505399 TDRD9Q8NDG6 1382 aaKnown RBP8.98□□□□□ -0.97
FBXO38-209ENST00000505399 MNX1P50219 401 aaPredicted RBP8.96□□□□□ -0.98
FBXO38-209ENST00000505399 PHF12Q96QT6 1004 aa8.96□□□□□ -0.98
FBXO38-209ENST00000505399 WDR97A6NE52 1622 aa8.94□□□□□ -0.98
FBXO38-209ENST00000505399 ATP1B4Q9UN42 357 aaPredicted RBP8.94□□□□□ -0.98
FBXO38-209ENST00000505399 WDR62O43379 1518 aa8.94□□□□□ -0.98
FBXO38-209ENST00000505399 CHMP7Q8WUX9 453 aaPredicted RBP8.93□□□□□ -0.98
FBXO38-209ENST00000505399 GRIN2BQ13224 1484 aa8.93□□□□□ -0.98
FBXO38-209ENST00000505399 VPS8Q8N3P4 1428 aa8.92□□□□□ -0.98
FBXO38-209ENST00000505399 FHAD1B1AJZ9 1412 aa8.91□□□□□ -0.98
FBXO38-209ENST00000505399 ZEB1P37275 1124 aaPredicted RBP8.9□□□□□ -0.98
FBXO38-209ENST00000505399 PPARGC1BQ86YN6 1023 aaKnown RBP8.9□□□□□ -0.98
FBXO38-209ENST00000505399 PROM2Q8N271 834 aa8.89□□□□□ -0.99
FBXO38-209ENST00000505399 TARBP1Q13395 1621 aaKnown RBP8.88□□□□□ -0.99
FBXO38-209ENST00000505399 ABCA5Q8WWZ7 1642 aa8.88□□□□□ -0.99
FBXO38-209ENST00000505399 TTBK1Q5TCY1 1321 aaPredicted RBP8.88□□□□□ -0.99
FBXO38-209ENST00000505399 AQRO60306 1485 aaKnown RBP eCLIP8.88□□□□□ -0.994e-6■■■■■ 31
FBXO38-209ENST00000505399 PBRM1Q86U86 1689 aa8.87□□□□□ -0.99
FBXO38-209ENST00000505399 P3H3Q8IVL6 736 aa8.86□□□□□ -0.99
FBXO38-209ENST00000505399 EFCAB5A4FU69 1503 aa8.85□□□□□ -0.99
FBXO38-209ENST00000505399 CTTNBP2Q8WZ74 1663 aa8.85□□□□□ -0.99
FBXO38-209ENST00000505399 OTUD5Q96G74 571 aa8.85□□□□□ -0.99
FBXO38-209ENST00000505399 FMN1Q68DA7 1419 aa8.85□□□□□ -0.99
FBXO38-209ENST00000505399 MAGI1Q96QZ7 1491 aaPredicted RBP8.84□□□□□ -0.99
FBXO38-209ENST00000505399 THOC2Q8NI27 1593 aaKnown RBP8.84□□□□□ -0.99
FBXO38-209ENST00000505399 POTEB2H3BUK9 544 aa8.83□□□□□ -1
FBXO38-209ENST00000505399 PLEKHG5O94827 1062 aa8.83□□□□□ -1
FBXO38-209ENST00000505399 ASTLQ6HA08 431 aaPredicted RBP8.83□□□□□ -1
FBXO38-209ENST00000505399 PELP1Q8IZL8 1130 aaKnown RBP8.83□□□□□ -1
FBXO38-209ENST00000505399 MS4A3Q96HJ5 214 aa8.83□□□□□ -1
FBXO38-209ENST00000505399 C7P10643 843 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms