RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 MAPKBP1O60336 1514 aa23.23■■□□□ 1.31
DDX41-205ENST00000505081 RAD54L2Q9Y4B4 1467 aa23.2■■□□□ 1.3
DDX41-205ENST00000505081 FANCD2Q9BXW9 1451 aa23.19■■□□□ 1.3
DDX41-205ENST00000505081 MAP3K1Q13233 1512 aa23.19■■□□□ 1.3
DDX41-205ENST00000505081 SETD5Q9C0A6 1442 aa23.18■■□□□ 1.3
DDX41-205ENST00000505081 CC2D2AQ9P2K1 1620 aa23.18■■□□□ 1.3
DDX41-205ENST00000505081 SIN3AQ96ST3 1273 aa23.18■■□□□ 1.3
DDX41-205ENST00000505081 PCF11O94913 1555 aaKnown RBP23.17■■□□□ 1.3
DDX41-205ENST00000505081 FHOD3Q2V2M9 1422 aa23.17■■□□□ 1.3
DDX41-205ENST00000505081 KCNH8Q96L42 1107 aa23.14■■□□□ 1.29
DDX41-205ENST00000505081 FHAD1B1AJZ9 1412 aa23.13■■□□□ 1.29
DDX41-205ENST00000505081 NESP48681 1621 aa23.1■■□□□ 1.29
DDX41-205ENST00000505081 CFAP43Q8NDM7 1665 aa23.08■■□□□ 1.28
DDX41-205ENST00000505081 POLA1P09884 1462 aaPredicted RBP23.07■■□□□ 1.28
DDX41-205ENST00000505081 WDR97A6NE52 1622 aa23.06■■□□□ 1.28
DDX41-205ENST00000505081 TOPBP1Q92547 1522 aa23.05■■□□□ 1.28
DDX41-205ENST00000505081 DNMBPQ6XZF7 1577 aa23.04■■□□□ 1.28
DDX41-205ENST00000505081 SUPT16HQ9Y5B9 1047 aaKnown RBP23.03■■□□□ 1.28
DDX41-205ENST00000505081 ABCA10Q8WWZ4 1543 aa23.03■■□□□ 1.28
DDX41-205ENST00000505081 HIRIP3Q9BW71 556 aaPredicted RBP23.02■■□□□ 1.27
DDX41-205ENST00000505081 DDX10Q13206 875 aaKnown RBP23■■□□□ 1.27
DDX41-205ENST00000505081 FYCO1Q9BQS8 1478 aa22.97■■□□□ 1.27
DDX41-205ENST00000505081 CASKIN1Q8WXD9 1431 aa22.97■■□□□ 1.27
DDX41-205ENST00000505081 EFCAB5A4FU69 1503 aa22.93■■□□□ 1.26
DDX41-205ENST00000505081 TDRD9Q8NDG6 1382 aaKnown RBP22.91■■□□□ 1.26
DDX41-205ENST00000505081 CTTNBP2Q8WZ74 1663 aa22.9■■□□□ 1.26
DDX41-205ENST00000505081 CUL7Q14999 1698 aa22.89■■□□□ 1.25
DDX41-205ENST00000505081 AQRO60306 1485 aaKnown RBP eCLIP22.88■■□□□ 1.257e-8■■■■■ 75.9
DDX41-205ENST00000505081 FGD6Q6ZV73 1430 aa22.87■■□□□ 1.25
DDX41-205ENST00000505081 URB2Q14146 1524 aaKnown RBP22.87■■□□□ 1.25
DDX41-205ENST00000505081 PPP1R15AO75807 674 aaPredicted RBP22.87■■□□□ 1.25
DDX41-205ENST00000505081 SNAPC4Q5SXM2 1469 aa22.86■■□□□ 1.25
DDX41-205ENST00000505081 MTUS2Q5JR59 1369 aa22.85■■□□□ 1.25
DDX41-205ENST00000505081 PTPRKQ15262 1439 aa22.85■■□□□ 1.25
DDX41-205ENST00000505081 FMN1Q68DA7 1419 aa22.85■■□□□ 1.25
DDX41-205ENST00000505081 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.82■■□□□ 1.24
DDX41-205ENST00000505081 DNAJC5BQ9UF47 199 aa22.81■■□□□ 1.24
DDX41-205ENST00000505081 LRRIQ1Q96JM4 1722 aa22.79■■□□□ 1.24
DDX41-205ENST00000505081 TIMELESSQ9UNS1 1208 aa22.79■■□□□ 1.24
DDX41-205ENST00000505081 CCDC18Q5T9S5 1454 aa22.79■■□□□ 1.24
DDX41-205ENST00000505081 BCANQ96GW7 911 aa22.75■■□□□ 1.23
DDX41-205ENST00000505081 GAPVD1Q14C86 1478 aa22.75■■□□□ 1.23
DDX41-205ENST00000505081 TONSLQ96HA7 1378 aa22.75■■□□□ 1.23
DDX41-205ENST00000505081 NCOA2Q15596 1464 aa22.74■■□□□ 1.23
DDX41-205ENST00000505081 SAMD9Q5K651 1589 aa22.73■■□□□ 1.23
DDX41-205ENST00000505081 ABCA5Q8WWZ7 1642 aa22.73■■□□□ 1.23
DDX41-205ENST00000505081 HFM1A2PYH4 1435 aa22.72■■□□□ 1.23
DDX41-205ENST00000505081 PTPN23Q9H3S7 1636 aa22.71■■□□□ 1.23
DDX41-205ENST00000505081 GRIN2BQ13224 1484 aa22.71■■□□□ 1.23
DDX41-205ENST00000505081 LAMC3Q9Y6N6 1575 aa22.7■■□□□ 1.22
DDX41-205ENST00000505081 NAIPQ13075 1403 aa22.69■■□□□ 1.22
DDX41-205ENST00000505081 MYOM3Q5VTT5 1437 aa22.69■■□□□ 1.22
DDX41-205ENST00000505081 UACAQ9BZF9 1416 aa22.69■■□□□ 1.22
DDX41-205ENST00000505081 TRIM52Q96A61 297 aa22.69■■□□□ 1.22
DDX41-205ENST00000505081 CHIC2Q9UKJ5 165 aa22.68■■□□□ 1.22
DDX41-205ENST00000505081 TSHZ2Q9NRE2 1034 aa22.68■■□□□ 1.22
DDX41-205ENST00000505081 RRP7BPQ9NSQ0 103 aa22.67■■□□□ 1.22
DDX41-205ENST00000505081 ANP32CO43423 234 aa22.67■■□□□ 1.22
DDX41-205ENST00000505081 FKBP8Q14318 412 aa22.66■■□□□ 1.22
DDX41-205ENST00000505081 ARID3CA6NKF2 412 aa22.65■■□□□ 1.22
DDX41-205ENST00000505081 MAGI3Q5TCQ9 1506 aa22.65■■□□□ 1.22
DDX41-205ENST00000505081 SUPT6HQ7KZ85 1726 aaKnown RBP22.62■■□□□ 1.21
DDX41-205ENST00000505081 PDS5BQ9NTI5 1447 aa22.6■■□□□ 1.21
DDX41-205ENST00000505081 EHBP1L1Q8N3D4 1523 aa22.6■■□□□ 1.21
DDX41-205ENST00000505081 CCER2I3L3R5 266 aa22.59■■□□□ 1.21
DDX41-205ENST00000505081 KIF21AQ7Z4S6 1674 aa22.59■■□□□ 1.21
DDX41-205ENST00000505081 UGGT2Q9NYU1 1516 aa22.58■■□□□ 1.2
DDX41-205ENST00000505081 MYT1Q01538 1121 aa22.57■■□□□ 1.2
DDX41-205ENST00000505081 KDM5BQ9UGL1 1544 aa22.56■■□□□ 1.2
DDX41-205ENST00000505081 THOC2Q8NI27 1593 aaKnown RBP22.54■■□□□ 1.2
DDX41-205ENST00000505081 TARBP1Q13395 1621 aaKnown RBP22.53■■□□□ 1.2
DDX41-205ENST00000505081 ARHGEF11O15085 1522 aa22.53■■□□□ 1.2
DDX41-205ENST00000505081 KDM6BO15054 1643 aa22.51■■□□□ 1.19
DDX41-205ENST00000505081 DENND4BO75064 1496 aaPredicted RBP22.51■■□□□ 1.19
DDX41-205ENST00000505081 CDK13Q14004 1512 aaKnown RBP22.5■■□□□ 1.19
DDX41-205ENST00000505081 FOXD1Q16676 465 aa22.5■■□□□ 1.19
DDX41-205ENST00000505081 HSPA5P11021 654 aaKnown RBP22.47■■□□□ 1.19
DDX41-205ENST00000505081 EPRSP07814 1512 aaKnown RBP22.47■■□□□ 1.19
DDX41-205ENST00000505081 TCOF1Q13428 1488 aaKnown RBP22.45■■□□□ 1.18
DDX41-205ENST00000505081 NEFLP07196 543 aa22.44■■□□□ 1.18
DDX41-205ENST00000505081 HECW1Q76N89 1606 aa22.44■■□□□ 1.18
DDX41-205ENST00000505081 PBRM1Q86U86 1689 aa22.44■■□□□ 1.18
DDX41-205ENST00000505081 WASHC2AQ641Q2 1341 aa22.44■■□□□ 1.18
DDX41-205ENST00000505081 IQGAP2Q13576 1575 aa22.44■■□□□ 1.18
DDX41-205ENST00000505081 MPHOSPH9Q99550 1183 aa22.42■■□□□ 1.18
DDX41-205ENST00000505081 GCC2Q8IWJ2 1684 aa22.41■■□□□ 1.18
DDX41-205ENST00000505081 L3MBTL2Q969R5 705 aa22.39■■□□□ 1.17
DDX41-205ENST00000505081 HNRNPUQ00839 825 aaKnown RBP eCLIP22.38■■□□□ 1.17
DDX41-205ENST00000505081 ADAMTS12P58397 1594 aa22.38■■□□□ 1.17
DDX41-205ENST00000505081 WDR62O43379 1518 aa22.37■■□□□ 1.17
DDX41-205ENST00000505081 ZNF644Q9H582 1327 aaPredicted RBP22.37■■□□□ 1.17
DDX41-205ENST00000505081 C11orf95C9JLR9 678 aaPredicted RBP22.34■■□□□ 1.17
DDX41-205ENST00000505081 EIF4G2P78344 907 aaKnown RBP eCLIP22.34■■□□□ 1.17
DDX41-205ENST00000505081 MIA2Q96PC5 1412 aa22.33■■□□□ 1.17
DDX41-205ENST00000505081 CCDC184Q52MB2 194 aa22.33■■□□□ 1.17
DDX41-205ENST00000505081 ZNF608Q9ULD9 1512 aaPredicted RBP22.32■■□□□ 1.16
DDX41-205ENST00000505081 IRX6P78412 446 aaPredicted RBP22.31■■□□□ 1.16
DDX41-205ENST00000505081 AKNAQ7Z591 1439 aa22.31■■□□□ 1.16
DDX41-205ENST00000505081 NBPF8Q3BBV2 869 aa22.29■■□□□ 1.16
DDX41-205ENST00000505081 DAPK1P53355 1430 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms