RNA–Protein interactions for RNA: ENST00000504335.1

SMTN-221, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 2,608 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-221ENST00000504335 EEA1Q15075 1411 aa18.49■□□□□ 0.55
SMTN-221ENST00000504335 A0A0U1RQG5 324 aaPredicted RBP18.48■□□□□ 0.55
SMTN-221ENST00000504335 HSP90AA2PQ14568 343 aaPredicted RBP18.47■□□□□ 0.55
SMTN-221ENST00000504335 IRX6P78412 446 aaPredicted RBP18.47■□□□□ 0.55
SMTN-221ENST00000504335 PDIA4P13667 645 aaKnown RBP18.46■□□□□ 0.55
SMTN-221ENST00000504335 TNIKQ9UKE5 1360 aa18.43■□□□□ 0.54
SMTN-221ENST00000504335 ANP32CO43423 234 aa18.41■□□□□ 0.54
SMTN-221ENST00000504335 NACADO15069 1562 aa18.41■□□□□ 0.54
SMTN-221ENST00000504335 RB1CC1Q8TDY2 1594 aa18.39■□□□□ 0.54
SMTN-221ENST00000504335 DDX10Q13206 875 aaKnown RBP18.39■□□□□ 0.53
SMTN-221ENST00000504335 B4GALNT3Q6L9W6 998 aa18.37■□□□□ 0.53
SMTN-221ENST00000504335 PPP1R15AO75807 674 aaPredicted RBP18.36■□□□□ 0.53
SMTN-221ENST00000504335 HSP90AA1P07900 732 aaKnown RBP18.34■□□□□ 0.53
SMTN-221ENST00000504335 LAS1LQ9Y4W2 734 aaKnown RBP18.33■□□□□ 0.53
SMTN-221ENST00000504335 RSF1Q96T23 1441 aaPredicted RBP18.33■□□□□ 0.52
SMTN-221ENST00000504335 HNRNPUQ00839 825 aaKnown RBP eCLIP18.28■□□□□ 0.52
SMTN-221ENST00000504335 FRAT1Q92837 279 aaPredicted RBP18.27■□□□□ 0.52
SMTN-221ENST00000504335 BCL11BQ9C0K0 894 aaPredicted RBP18.26■□□□□ 0.51
SMTN-221ENST00000504335 CALD1Q05682 793 aaKnown RBP18.21■□□□□ 0.51
SMTN-221ENST00000504335 TAF7LQ5H9L4 462 aa18.2■□□□□ 0.5
SMTN-221ENST00000504335 CENPJQ9HC77 1338 aaPredicted RBP18.2■□□□□ 0.5
SMTN-221ENST00000504335 NAP1L5Q96NT1 182 aaPredicted RBP18.19■□□□□ 0.5
SMTN-221ENST00000504335 NFKBIBQ15653 356 aa18.17■□□□□ 0.5
SMTN-221ENST00000504335 NCAPD3P42695 1498 aa18.16■□□□□ 0.5
SMTN-221ENST00000504335 PNNQ9H307 717 aaKnown RBP18.14■□□□□ 0.49
SMTN-221ENST00000504335 RRAGDQ9NQL2 400 aaPredicted RBP18.14■□□□□ 0.49
SMTN-221ENST00000504335 DCAF11Q8TEB1 546 aa18.14■□□□□ 0.49
SMTN-221ENST00000504335 DDRGK1Q96HY6 314 aa18.14■□□□□ 0.49
SMTN-221ENST00000504335 PRDM4Q9UKN5 801 aa18.14■□□□□ 0.49
SMTN-221ENST00000504335 NPM2Q86SE8 214 aaKnown RBP18.1■□□□□ 0.49
SMTN-221ENST00000504335 RANGAP1P46060 587 aaPredicted RBP18.09■□□□□ 0.49
SMTN-221ENST00000504335 PDCL3Q9H2J4 239 aa18.09■□□□□ 0.49
SMTN-221ENST00000504335 CUX2O14529 1486 aa18.07■□□□□ 0.48
SMTN-221ENST00000504335 CLCN1P35523 988 aa18.06■□□□□ 0.48
SMTN-221ENST00000504335 TCERG1O14776 1098 aaKnown RBP18.05■□□□□ 0.48
SMTN-221ENST00000504335 UBTFP17480 764 aaKnown RBP18.05■□□□□ 0.48
SMTN-221ENST00000504335 VPS8Q8N3P4 1428 aa18.02■□□□□ 0.47
SMTN-221ENST00000504335 GOLGA3Q08378 1498 aa18.02■□□□□ 0.47
SMTN-221ENST00000504335 L1TD1Q5T7N2 865 aaKnown RBP18.02■□□□□ 0.47
SMTN-221ENST00000504335 WDR97A6NE52 1622 aa18■□□□□ 0.47
SMTN-221ENST00000504335 SCRIBQ14160 1630 aa18■□□□□ 0.47
SMTN-221ENST00000504335 ZBED9Q6R2W3 1325 aa17.99■□□□□ 0.47
SMTN-221ENST00000504335 MS4A1P11836 297 aa17.99■□□□□ 0.47
SMTN-221ENST00000504335 PDE4AP27815 886 aa17.99■□□□□ 0.47
SMTN-221ENST00000504335 RGS3P49796 1198 aa17.99■□□□□ 0.47
SMTN-221ENST00000504335 ZNF326Q5BKZ1 582 aaKnown RBP17.99■□□□□ 0.47
SMTN-221ENST00000504335 BACH2Q9BYV9 841 aa17.98■□□□□ 0.47
SMTN-221ENST00000504335 TPM2P07951 284 aa17.96■□□□□ 0.47
SMTN-221ENST00000504335 CLIP1P30622 1438 aa17.96■□□□□ 0.47
SMTN-221ENST00000504335 PEG3Q9GZU2 1588 aa17.96■□□□□ 0.47
SMTN-221ENST00000504335 CEP164Q9UPV0 1460 aa17.96■□□□□ 0.47
SMTN-221ENST00000504335 NAP1L2Q9ULW6 460 aaPredicted RBP17.95■□□□□ 0.46
SMTN-221ENST00000504335 BBXQ8WY36 941 aaPredicted RBP17.94■□□□□ 0.46
SMTN-221ENST00000504335 SMARCA2P51531 1590 aa17.94■□□□□ 0.46
SMTN-221ENST00000504335 RNF123Q5XPI4 1314 aa17.93■□□□□ 0.46
SMTN-221ENST00000504335 SIN3AQ96ST3 1273 aa17.93■□□□□ 0.46
SMTN-221ENST00000504335 MAPKBP1O60336 1514 aa17.92■□□□□ 0.46
SMTN-221ENST00000504335 NCLP19338 710 aaKnown RBP17.92■□□□□ 0.46
SMTN-221ENST00000504335 KLHL34Q8N239 644 aa17.89■□□□□ 0.46
SMTN-221ENST00000504335 ABCC8Q09428 1581 aa17.89■□□□□ 0.45
SMTN-221ENST00000504335 EIF4G1Q04637 1599 aaKnown RBP17.87■□□□□ 0.45
SMTN-221ENST00000504335 SMG6Q86US8 1419 aaKnown RBP17.87■□□□□ 0.45
SMTN-221ENST00000504335 CANXP27824 592 aaKnown RBP17.87■□□□□ 0.45
SMTN-221ENST00000504335 RSPH4AQ5TD94 716 aa17.87■□□□□ 0.45
SMTN-221ENST00000504335 IPO4Q8TEX9 1081 aaKnown RBP17.86■□□□□ 0.45
SMTN-221ENST00000504335 FRAT2O75474 233 aaPredicted RBP17.85■□□□□ 0.45
SMTN-221ENST00000504335 GTF2E1P29083 439 aaPredicted RBP17.85■□□□□ 0.45
SMTN-221ENST00000504335 RRBP1Q9P2E9 1410 aaKnown RBP17.85■□□□□ 0.45
SMTN-221ENST00000504335 CCDC88BA6NC98 1476 aa17.84■□□□□ 0.45
SMTN-221ENST00000504335 SOGA1O94964 1423 aa17.84■□□□□ 0.45
SMTN-221ENST00000504335 MAP7D2Q96T17 732 aa17.84■□□□□ 0.45
SMTN-221ENST00000504335 CNGB1Q14028 1251 aaPredicted RBP17.83■□□□□ 0.44
SMTN-221ENST00000504335 SMAP1Q8IYB5 467 aaPredicted RBP17.83■□□□□ 0.44
SMTN-221ENST00000504335 ARXQ96QS3 562 aa17.83■□□□□ 0.44
SMTN-221ENST00000504335 NCBP3Q53F19 620 aaKnown RBP17.82■□□□□ 0.44
SMTN-221ENST00000504335 AEBP2Q6ZN18 517 aaPredicted RBP17.8■□□□□ 0.44
SMTN-221ENST00000504335 STAC3Q96MF2 364 aa17.8■□□□□ 0.44
SMTN-221ENST00000504335 HIRIP3Q9BW71 556 aaPredicted RBP17.8■□□□□ 0.44
SMTN-221ENST00000504335 CHMP4BQ9H444 224 aaKnown RBP17.79■□□□□ 0.44
SMTN-221ENST00000504335 AKNAQ7Z591 1439 aa17.78■□□□□ 0.44
SMTN-221ENST00000504335 NUDCQ9Y266 331 aa17.77■□□□□ 0.44
SMTN-221ENST00000504335 PAXIP1Q6ZW49 1069 aaPredicted RBP17.75■□□□□ 0.43
SMTN-221ENST00000504335 RAB3GAP2Q9H2M9 1393 aa17.75■□□□□ 0.43
SMTN-221ENST00000504335 UTP14CQ5TAP6 766 aaKnown RBP17.72■□□□□ 0.43
SMTN-221ENST00000504335 POGKQ9P215 609 aa17.72■□□□□ 0.43
SMTN-221ENST00000504335 FAM9BQ8IZU0 186 aa17.71■□□□□ 0.43
SMTN-221ENST00000504335 UNC13AQ9UPW8 1703 aa17.7■□□□□ 0.42
SMTN-221ENST00000504335 ESPNB1AK53 854 aa17.69■□□□□ 0.42
SMTN-221ENST00000504335 SLC4A3P48751 1232 aa17.69■□□□□ 0.42
SMTN-221ENST00000504335 BAZ1BQ9UIG0 1483 aaKnown RBP17.69■□□□□ 0.42
SMTN-221ENST00000504335 GOLGA6L3A6NEY3 463 aa17.69■□□□□ 0.42
SMTN-221ENST00000504335 XRCC6P12956 609 aaKnown RBP eCLIP17.69■□□□□ 0.42
SMTN-221ENST00000504335 KIF21BO75037 1637 aa17.68■□□□□ 0.42
SMTN-221ENST00000504335 CCNB3Q8WWL7 1395 aa17.68■□□□□ 0.42
SMTN-221ENST00000504335 TERF1P54274 439 aa17.67■□□□□ 0.42
SMTN-221ENST00000504335 MTERF4Q7Z6M4 381 aaKnown RBP17.67■□□□□ 0.42
SMTN-221ENST00000504335 MRS2Q9HD23 443 aa17.67■□□□□ 0.42
SMTN-221ENST00000504335 FSD2A1L4K1 749 aa17.66■□□□□ 0.42
SMTN-221ENST00000504335 ARID4BQ4LE39 1312 aaPredicted RBP17.64■□□□□ 0.41
SMTN-221ENST00000504335 CCDC184Q52MB2 194 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms