RNA–Protein interactions for RNA: ENST00000503362.1

SPCS3-201, Transcript of signal peptidase complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPCS3, Length 4,571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-201ENST00000503362 DAXXQ9UER7 740 aaPredicted RBP18.21■□□□□ 0.51
SPCS3-201ENST00000503362 RAB3GAP2Q9H2M9 1393 aa18.2■□□□□ 0.5
SPCS3-201ENST00000503362 FHAD1B1AJZ9 1412 aa18.19■□□□□ 0.5
SPCS3-201ENST00000503362 DHX57Q6P158 1386 aaKnown RBP18.19■□□□□ 0.5
SPCS3-201ENST00000503362 EIF4G2P78344 907 aaKnown RBP eCLIP18.18■□□□□ 0.5
SPCS3-201ENST00000503362 MRS2Q9HD23 443 aa18.18■□□□□ 0.5
SPCS3-201ENST00000503362 SETD5Q9C0A6 1442 aa18.18■□□□□ 0.5
SPCS3-201ENST00000503362 RTL5Q5HYW3 569 aaPredicted RBP18.15■□□□□ 0.5
SPCS3-201ENST00000503362 SLC4A1APQ9BWU0 796 aaKnown RBP18.11■□□□□ 0.49
SPCS3-201ENST00000503362 TIMELESSQ9UNS1 1208 aa18.09■□□□□ 0.49
SPCS3-201ENST00000503362 SALL2Q9Y467 1007 aaPredicted RBP18.05■□□□□ 0.48
SPCS3-201ENST00000503362 KIF21BO75037 1637 aa18.05■□□□□ 0.48
SPCS3-201ENST00000503362 KDM2AQ9Y2K7 1162 aa18.04■□□□□ 0.48
SPCS3-201ENST00000503362 KCNH8Q96L42 1107 aa18.04■□□□□ 0.48
SPCS3-201ENST00000503362 SYNJ1O43426 1573 aa18.04■□□□□ 0.48
SPCS3-201ENST00000503362 TMC1Q8TDI8 760 aa18.04■□□□□ 0.48
SPCS3-201ENST00000503362 ARHGAP35Q9NRY4 1499 aa18.04■□□□□ 0.48
SPCS3-201ENST00000503362 PPP1R15AO75807 674 aaPredicted RBP18.01■□□□□ 0.47
SPCS3-201ENST00000503362 SENP3-EIF4A1A0A087X0R7 540 aa18■□□□□ 0.47
SPCS3-201ENST00000503362 ANP32AP39687 249 aaKnown RBP17.99■□□□□ 0.47
SPCS3-201ENST00000503362 CADPSQ9ULU8 1353 aa17.99■□□□□ 0.47
SPCS3-201ENST00000503362 FHOD3Q2V2M9 1422 aa17.99■□□□□ 0.47
SPCS3-201ENST00000503362 CCDC136Q96JN2 1154 aa17.98■□□□□ 0.47
SPCS3-201ENST00000503362 CCER2I3L3R5 266 aa17.98■□□□□ 0.47
SPCS3-201ENST00000503362 TSPY4P0CV99 314 aa17.98■□□□□ 0.47
SPCS3-201ENST00000503362 TSPY10P0CW01 314 aa17.98■□□□□ 0.47
SPCS3-201ENST00000503362 CHMP7Q8WUX9 453 aaPredicted RBP17.97■□□□□ 0.47
SPCS3-201ENST00000503362 NPM2Q86SE8 214 aaKnown RBP17.96■□□□□ 0.47
SPCS3-201ENST00000503362 ANP32EQ9BTT0 268 aa17.95■□□□□ 0.46
SPCS3-201ENST00000503362 TDRD9Q8NDG6 1382 aaKnown RBP17.95■□□□□ 0.46
SPCS3-201ENST00000503362 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.95■□□□□ 0.462e-9■■■■■ 27.9
SPCS3-201ENST00000503362 CFDP1Q9UEE9 299 aaPredicted RBP17.93■□□□□ 0.46
SPCS3-201ENST00000503362 IGF1RP08069 1367 aa17.92■□□□□ 0.46
SPCS3-201ENST00000503362 HSPA5P11021 654 aaKnown RBP17.91■□□□□ 0.46
SPCS3-201ENST00000503362 FOXD1Q16676 465 aa17.91■□□□□ 0.46
SPCS3-201ENST00000503362 EIF4G1Q04637 1599 aaKnown RBP17.91■□□□□ 0.46
SPCS3-201ENST00000503362 ARAP1Q96P48 1450 aa17.9■□□□□ 0.46
SPCS3-201ENST00000503362 FMN1Q68DA7 1419 aa17.9■□□□□ 0.46
SPCS3-201ENST00000503362 TSHZ2Q9NRE2 1034 aa17.9■□□□□ 0.46
SPCS3-201ENST00000503362 PLEKHD1A6NEE1 506 aa17.86■□□□□ 0.45
SPCS3-201ENST00000503362 RGL3Q3MIN7 710 aa17.83■□□□□ 0.44
SPCS3-201ENST00000503362 RBM19Q9Y4C8 960 aaKnown RBP17.82■□□□□ 0.44
SPCS3-201ENST00000503362 NBR1Q14596 966 aa17.82■□□□□ 0.44
SPCS3-201ENST00000503362 PRXQ9BXM0 1461 aa17.82■□□□□ 0.44
SPCS3-201ENST00000503362 PHLDB1Q86UU1 1377 aa17.82■□□□□ 0.44
SPCS3-201ENST00000503362 PPP4R2Q9NY27 417 aa17.82■□□□□ 0.44
SPCS3-201ENST00000503362 MPHOSPH9Q99550 1183 aa17.81■□□□□ 0.44
SPCS3-201ENST00000503362 CARD11Q9BXL7 1154 aa17.81■□□□□ 0.44
SPCS3-201ENST00000503362 B4GALNT3Q6L9W6 998 aa17.81■□□□□ 0.44
SPCS3-201ENST00000503362 NCAPD3P42695 1498 aa17.8■□□□□ 0.44
SPCS3-201ENST00000503362 ERICH3Q5RHP9 1530 aa17.8■□□□□ 0.44
SPCS3-201ENST00000503362 FGD5Q6ZNL6 1462 aa17.8■□□□□ 0.44
SPCS3-201ENST00000503362 CANXP27824 592 aaKnown RBP17.79■□□□□ 0.44
SPCS3-201ENST00000503362 RRBP1Q9P2E9 1410 aaKnown RBP17.79■□□□□ 0.44
SPCS3-201ENST00000503362 L3MBTL2Q969R5 705 aa17.77■□□□□ 0.44
SPCS3-201ENST00000503362 TOP2BQ02880 1626 aa17.77■□□□□ 0.44
SPCS3-201ENST00000503362 FANCD2Q9BXW9 1451 aa17.76■□□□□ 0.43
SPCS3-201ENST00000503362 ZBTB47Q9UFB7 747 aaPredicted RBP17.76■□□□□ 0.43
SPCS3-201ENST00000503362 LRRC9Q6ZRR7 1453 aa17.74■□□□□ 0.43
SPCS3-201ENST00000503362 RAD54L2Q9Y4B4 1467 aa17.71■□□□□ 0.43
SPCS3-201ENST00000503362 CUX1P39880 1505 aa17.71■□□□□ 0.42
SPCS3-201ENST00000503362 BICRAQ9NZM4 1560 aa17.71■□□□□ 0.42
SPCS3-201ENST00000503362 CHGAP10645 457 aaKnown RBP17.71■□□□□ 0.42
SPCS3-201ENST00000503362 CFTRP13569 1480 aa17.7■□□□□ 0.42
SPCS3-201ENST00000503362 PDS5BQ9NTI5 1447 aa17.7■□□□□ 0.42
SPCS3-201ENST00000503362 CCDC18Q5T9S5 1454 aa17.7■□□□□ 0.42
SPCS3-201ENST00000503362 PKD2Q13563 968 aa17.69■□□□□ 0.42
SPCS3-201ENST00000503362 WDR43Q15061 677 aaKnown RBP eCLIP17.69■□□□□ 0.42
SPCS3-201ENST00000503362 DCAF11Q8TEB1 546 aa17.68■□□□□ 0.42
SPCS3-201ENST00000503362 FGD6Q6ZV73 1430 aa17.65■□□□□ 0.42
SPCS3-201ENST00000503362 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.59■□□□□ 0.41
SPCS3-201ENST00000503362 CC2D1BQ5T0F9 858 aaKnown RBP17.59■□□□□ 0.41
SPCS3-201ENST00000503362 BCL11AQ9H165 835 aa17.57■□□□□ 0.4
SPCS3-201ENST00000503362 PRKRIP1Q9H875 184 aaPredicted RBP17.57■□□□□ 0.4
SPCS3-201ENST00000503362 CASKIN1Q8WXD9 1431 aa17.57■□□□□ 0.4
SPCS3-201ENST00000503362 UACAQ9BZF9 1416 aa17.57■□□□□ 0.4
SPCS3-201ENST00000503362 ERICH6BQ5W0A0 696 aa17.57■□□□□ 0.4
SPCS3-201ENST00000503362 PEG3Q9GZU2 1588 aa17.55■□□□□ 0.4
SPCS3-201ENST00000503362 NUP155O75694 1391 aa17.55■□□□□ 0.4
SPCS3-201ENST00000503362 MYOM3Q5VTT5 1437 aa17.55■□□□□ 0.4
SPCS3-201ENST00000503362 TIAM1Q13009 1591 aa17.55■□□□□ 0.4
SPCS3-201ENST00000503362 KNSTRNQ9Y448 316 aa17.55■□□□□ 0.4
SPCS3-201ENST00000503362 UNC13AQ9UPW8 1703 aa17.55■□□□□ 0.4
SPCS3-201ENST00000503362 HMGXB3Q12766 1538 aa17.54■□□□□ 0.4
SPCS3-201ENST00000503362 ERCC6Q03468 1493 aa17.54■□□□□ 0.4
SPCS3-201ENST00000503362 GAPVD1Q14C86 1478 aa17.53■□□□□ 0.4
SPCS3-201ENST00000503362 NOP58Q9Y2X3 529 aaKnown RBP17.53■□□□□ 0.4
SPCS3-201ENST00000503362 ANKRD30AQ9BXX3 1397 aa17.51■□□□□ 0.39
SPCS3-201ENST00000503362 WDR97A6NE52 1622 aa17.5■□□□□ 0.39
SPCS3-201ENST00000503362 NCOA2Q15596 1464 aa17.5■□□□□ 0.39
SPCS3-201ENST00000503362 FYCO1Q9BQS8 1478 aa17.49■□□□□ 0.39
SPCS3-201ENST00000503362 ZNF644Q9H582 1327 aaPredicted RBP17.48■□□□□ 0.39
SPCS3-201ENST00000503362 NEFMP07197 916 aa17.48■□□□□ 0.39
SPCS3-201ENST00000503362 WASHC2AQ641Q2 1341 aa17.48■□□□□ 0.39
SPCS3-201ENST00000503362 NUDCQ9Y266 331 aa17.47■□□□□ 0.39
SPCS3-201ENST00000503362 CARMIL2Q6F5E8 1435 aa17.45■□□□□ 0.38
SPCS3-201ENST00000503362 HNRNPMP52272 730 aaKnown RBP eCLIP17.45■□□□□ 0.38
SPCS3-201ENST00000503362 TMF1P82094 1093 aa17.45■□□□□ 0.38
SPCS3-201ENST00000503362 CDCA8Q53HL2 280 aa17.45■□□□□ 0.38
SPCS3-201ENST00000503362 SENP3Q9H4L4 574 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms