RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 CHMP7Q8WUX9 453 aaPredicted RBP8.04□□□□□ -1.12
MATR3-202ENST00000502422 TARBP1Q13395 1621 aaKnown RBP8.03□□□□□ -1.12
MATR3-202ENST00000502422 TDRD9Q8NDG6 1382 aaKnown RBP8.01□□□□□ -1.13
MATR3-202ENST00000502422 POLA1P09884 1462 aaPredicted RBP8□□□□□ -1.13
MATR3-202ENST00000502422 CLASP1Q7Z460 1538 aa8□□□□□ -1.13
MATR3-202ENST00000502422 SOGA1O94964 1423 aa7.99□□□□□ -1.13
MATR3-202ENST00000502422 SYNJ1O43426 1573 aa7.99□□□□□ -1.13
MATR3-202ENST00000502422 RAD54L2Q9Y4B4 1467 aa7.99□□□□□ -1.13
MATR3-202ENST00000502422 SNAPC4Q5SXM2 1469 aa7.98□□□□□ -1.13
MATR3-202ENST00000502422 FBXO41Q8TF61 875 aa7.95□□□□□ -1.14
MATR3-202ENST00000502422 MAGI1Q96QZ7 1491 aaPredicted RBP7.95□□□□□ -1.14
MATR3-202ENST00000502422 GAPVD1Q14C86 1478 aa7.94□□□□□ -1.14
MATR3-202ENST00000502422 GRIN2BQ13224 1484 aa7.94□□□□□ -1.14
MATR3-202ENST00000502422 SYNJ2O15056 1496 aa7.93□□□□□ -1.14
MATR3-202ENST00000502422 FGD5Q6ZNL6 1462 aa7.93□□□□□ -1.14
MATR3-202ENST00000502422 MYCNP04198 464 aaPredicted RBP7.88□□□□□ -1.15
MATR3-202ENST00000502422 PBRM1Q86U86 1689 aa7.88□□□□□ -1.15
MATR3-202ENST00000502422 CUX1P39880 1505 aa7.86□□□□□ -1.15
MATR3-202ENST00000502422 SOCS7O14512 581 aa7.85□□□□□ -1.15
MATR3-202ENST00000502422 SLC24A1O60721 1099 aa7.85□□□□□ -1.15
MATR3-202ENST00000502422 NPM1P06748 294 aaKnown RBP eCLIP7.83□□□□□ -1.16
MATR3-202ENST00000502422 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.83□□□□□ -1.163e-7■■■□□ 18.1
MATR3-202ENST00000502422 GRIN2AQ12879 1464 aa7.82□□□□□ -1.16
MATR3-202ENST00000502422 LMTK3Q96Q04 1460 aa7.82□□□□□ -1.16
MATR3-202ENST00000502422 KIF13AQ9H1H9 1805 aa7.82□□□□□ -1.16
MATR3-202ENST00000502422 MAPKBP1O60336 1514 aa7.82□□□□□ -1.16
MATR3-202ENST00000502422 CEP170Q5SW79 1584 aa7.82□□□□□ -1.16
MATR3-202ENST00000502422 FAM69CQ0P6D2 419 aa7.81□□□□□ -1.16
MATR3-202ENST00000502422 ABCA10Q8WWZ4 1543 aa7.81□□□□□ -1.16
MATR3-202ENST00000502422 KDM6BO15054 1643 aa7.8□□□□□ -1.16
MATR3-202ENST00000502422 ABCA5Q8WWZ7 1642 aa7.8□□□□□ -1.16
MATR3-202ENST00000502422 HECW2Q9P2P5 1572 aa7.8□□□□□ -1.16
MATR3-202ENST00000502422 TOP2BQ02880 1626 aa7.8□□□□□ -1.16
MATR3-202ENST00000502422 SP7Q8TDD2 431 aaPredicted RBP7.8□□□□□ -1.16
MATR3-202ENST00000502422 ABCC10Q5T3U5 1492 aa7.79□□□□□ -1.16
MATR3-202ENST00000502422 NUP160Q12769 1436 aa7.79□□□□□ -1.16
MATR3-202ENST00000502422 ATXN8OSP0DMR3 200 aa7.78□□□□□ -1.16
MATR3-202ENST00000502422 KDM4FA0A1W2PPD8 638 aa7.78□□□□□ -1.16
MATR3-202ENST00000502422 JPH4Q96JJ6 628 aa7.77□□□□□ -1.17
MATR3-202ENST00000502422 PRG4Q92954 1404 aaPredicted RBP7.77□□□□□ -1.17
MATR3-202ENST00000502422 U3KPZ7 1027 aaPredicted RBP7.77□□□□□ -1.17
MATR3-202ENST00000502422 FHAD1B1AJZ9 1412 aa7.77□□□□□ -1.17
MATR3-202ENST00000502422 WRNQ14191 1432 aaPredicted RBP eCLIP7.77□□□□□ -1.17
MATR3-202ENST00000502422 ADAMTS12P58397 1594 aa7.77□□□□□ -1.17
MATR3-202ENST00000502422 SHROOM2Q13796 1616 aa7.77□□□□□ -1.17
MATR3-202ENST00000502422 DSG3P32926 999 aa7.75□□□□□ -1.17
MATR3-202ENST00000502422 ATF5Q9Y2D1 282 aaPredicted RBP7.74□□□□□ -1.17
MATR3-202ENST00000502422 TSPOAP1O95153 1857 aa7.73□□□□□ -1.17
MATR3-202ENST00000502422 DIP2BQ9P265 1576 aa7.72□□□□□ -1.17
MATR3-202ENST00000502422 ADGRL1O94910 1474 aa7.72□□□□□ -1.17
MATR3-202ENST00000502422 ERICH3Q5RHP9 1530 aa7.72□□□□□ -1.17
MATR3-202ENST00000502422 GLI2P10070 1586 aa7.7□□□□□ -1.18
MATR3-202ENST00000502422 TTBK1Q5TCY1 1321 aaPredicted RBP7.68□□□□□ -1.18
MATR3-202ENST00000502422 SUPT5HO00267 1087 aaKnown RBP7.68□□□□□ -1.18
MATR3-202ENST00000502422 ADCY10Q96PN6 1610 aa7.68□□□□□ -1.18
MATR3-202ENST00000502422 BIVM-ERCC5R4GMW8 1640 aa7.67□□□□□ -1.18
MATR3-202ENST00000502422 SAMD1Q6SPF0 538 aaPredicted RBP7.66□□□□□ -1.18
MATR3-202ENST00000502422 RUSC2Q8N2Y8 1516 aa7.66□□□□□ -1.18
MATR3-202ENST00000502422 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.66□□□□□ -1.18
MATR3-202ENST00000502422 HNRNPUL2Q1KMD3 747 aaKnown RBP7.66□□□□□ -1.18
MATR3-202ENST00000502422 KIAA0586Q9BVV6 1533 aa7.64□□□□□ -1.19
MATR3-202ENST00000502422 TEX14Q8IWB6 1497 aa7.63□□□□□ -1.19
MATR3-202ENST00000502422 PTPRGP23470 1445 aa7.63□□□□□ -1.19
MATR3-202ENST00000502422 RBM42Q9BTD8 480 aaKnown RBP7.63□□□□□ -1.19
MATR3-202ENST00000502422 SPATA31D1Q6ZQQ2 1576 aa7.62□□□□□ -1.19
MATR3-202ENST00000502422 IQSEC2Q5JU85 1478 aa7.61□□□□□ -1.19
MATR3-202ENST00000502422 PLB1Q6P1J6 1458 aa7.61□□□□□ -1.19
MATR3-202ENST00000502422 CAPN15O75808 1086 aa7.61□□□□□ -1.19
MATR3-202ENST00000502422 CARMIL2Q6F5E8 1435 aa7.6□□□□□ -1.19
MATR3-202ENST00000502422 CHRDL2Q6WN34 429 aa7.6□□□□□ -1.19
MATR3-202ENST00000502422 ASXL2Q76L83 1435 aa7.6□□□□□ -1.19
MATR3-202ENST00000502422 ABCC2Q92887 1545 aa7.59□□□□□ -1.19
MATR3-202ENST00000502422 TNIKQ9UKE5 1360 aa7.59□□□□□ -1.19
MATR3-202ENST00000502422 CUL7Q14999 1698 aa7.57□□□□□ -1.2
MATR3-202ENST00000502422 PPRC1Q5VV67 1664 aaKnown RBP7.57□□□□□ -1.2
MATR3-202ENST00000502422 IGF1RP08069 1367 aa7.57□□□□□ -1.2
MATR3-202ENST00000502422 KIF27Q86VH2 1401 aa7.57□□□□□ -1.2
MATR3-202ENST00000502422 DISP3Q9P2K9 1392 aa7.56□□□□□ -1.2
MATR3-202ENST00000502422 COL17A1Q9UMD9 1497 aaPredicted RBP7.56□□□□□ -1.2
MATR3-202ENST00000502422 UACAQ9BZF9 1416 aa7.55□□□□□ -1.2
MATR3-202ENST00000502422 CARMIL1Q5VZK9 1371 aa7.54□□□□□ -1.2
MATR3-202ENST00000502422 EPRSP07814 1512 aaKnown RBP7.54□□□□□ -1.2
MATR3-202ENST00000502422 UHRF1BP1LA0JNW5 1464 aa7.53□□□□□ -1.2
MATR3-202ENST00000502422 MAP3K4Q9Y6R4 1608 aa7.53□□□□□ -1.2
MATR3-202ENST00000502422 ZNF219Q9P2Y4 722 aaPredicted RBP7.53□□□□□ -1.2
MATR3-202ENST00000502422 IQGAP2Q13576 1575 aa7.52□□□□□ -1.21
MATR3-202ENST00000502422 PCF11O94913 1555 aaKnown RBP7.52□□□□□ -1.21
MATR3-202ENST00000502422 FKBP8Q14318 412 aa7.52□□□□□ -1.21
MATR3-202ENST00000502422 KDM5BQ9UGL1 1544 aa7.51□□□□□ -1.21
MATR3-202ENST00000502422 KCNH8Q96L42 1107 aa7.51□□□□□ -1.21
MATR3-202ENST00000502422 PHLDB1Q86UU1 1377 aa7.51□□□□□ -1.21
MATR3-202ENST00000502422 APLP2Q06481 763 aa7.5□□□□□ -1.21
MATR3-202ENST00000502422 SPINK5Q9NQ38 1064 aaPredicted RBP7.5□□□□□ -1.21
MATR3-202ENST00000502422 ZCCHC11Q5TAX3 1644 aaKnown RBP7.5□□□□□ -1.21
MATR3-202ENST00000502422 CD109Q6YHK3 1445 aa7.49□□□□□ -1.21
MATR3-202ENST00000502422 CERKQ8TCT0 537 aa7.49□□□□□ -1.21
MATR3-202ENST00000502422 WDR7Q9Y4E6 1490 aa7.48□□□□□ -1.21
MATR3-202ENST00000502422 DISP1Q96F81 1524 aa7.48□□□□□ -1.21
MATR3-202ENST00000502422 ADAMTSL3P82987 1691 aa7.48□□□□□ -1.21
MATR3-202ENST00000502422 ILDR2Q71H61 639 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms