RNA–Protein interactions for RNA: ENST00000497873.1

PAXBP1-209, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 2

Gene PAXBP1, Length 2,277 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-209ENST00000497873 DNAJC5Q9H3Z4 198 aa13□□□□□ -0.33
PAXBP1-209ENST00000497873 CACNB1Q02641 598 aaPredicted RBP12.97□□□□□ -0.33
PAXBP1-209ENST00000497873 NBR1Q14596 966 aa12.97□□□□□ -0.33
PAXBP1-209ENST00000497873 NKX1-1Q15270 411 aaPredicted RBP12.97□□□□□ -0.33
PAXBP1-209ENST00000497873 RIOK3O14730 519 aaKnown RBP12.97□□□□□ -0.33
PAXBP1-209ENST00000497873 SPDYE1Q8NFV5 336 aaPredicted RBP12.92□□□□□ -0.34
PAXBP1-209ENST00000497873 GTPBP6O43824 516 aaPredicted RBP12.91□□□□□ -0.34
PAXBP1-209ENST00000497873 CLEC11AQ9Y240 323 aa12.91□□□□□ -0.34
PAXBP1-209ENST00000497873 STK25O00506 426 aa12.9□□□□□ -0.34
PAXBP1-209ENST00000497873 FAM212AQ96EL1 285 aa12.89□□□□□ -0.35
PAXBP1-209ENST00000497873 CREBZFQ9NS37 354 aa12.88□□□□□ -0.35
PAXBP1-209ENST00000497873 PRR29P0C7W0 189 aa12.86□□□□□ -0.35
PAXBP1-209ENST00000497873 VGFO15240 615 aaPredicted RBP12.86□□□□□ -0.35
PAXBP1-209ENST00000497873 MNX1P50219 401 aaPredicted RBP12.85□□□□□ -0.35
PAXBP1-209ENST00000497873 AKT1S1Q96B36 256 aa12.83□□□□□ -0.35
PAXBP1-209ENST00000497873 RASEFQ8IZ41 740 aa12.82□□□□□ -0.36
PAXBP1-209ENST00000497873 CHRM1P11229 460 aaPredicted RBP12.79□□□□□ -0.36
PAXBP1-209ENST00000497873 STK24Q9Y6E0 443 aa12.79□□□□□ -0.36
PAXBP1-209ENST00000497873 RBM42Q9BTD8 480 aaKnown RBP12.79□□□□□ -0.36
PAXBP1-209ENST00000497873 BCL11BQ9C0K0 894 aaPredicted RBP12.78□□□□□ -0.36
PAXBP1-209ENST00000497873 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.78□□□□□ -0.36
PAXBP1-209ENST00000497873 ZFP91Q96JP5 570 aaPredicted RBP12.78□□□□□ -0.36
PAXBP1-209ENST00000497873 PYGBP11216 843 aa12.76□□□□□ -0.37
PAXBP1-209ENST00000497873 REM2Q8IYK8 340 aaPredicted RBP12.76□□□□□ -0.37
PAXBP1-209ENST00000497873 SGIP1Q9BQI5 828 aa12.73□□□□□ -0.37
PAXBP1-209ENST00000497873 RYDENQ9NUL5 291 aaKnown RBP12.68□□□□□ -0.38
PAXBP1-209ENST00000497873 PITPNM1O00562 1244 aa12.6□□□□□ -0.39
PAXBP1-209ENST00000497873 TSPYL2Q9H2G4 693 aaPredicted RBP12.57□□□□□ -0.4
PAXBP1-209ENST00000497873 CADPS2Q86UW7 1296 aa12.54□□□□□ -0.4
PAXBP1-209ENST00000497873 P3H3Q8IVL6 736 aa12.54□□□□□ -0.4
PAXBP1-209ENST00000497873 CHADLQ6NUI6 762 aa12.53□□□□□ -0.4
PAXBP1-209ENST00000497873 ZNF467Q7Z7K2 595 aaPredicted RBP12.51□□□□□ -0.41
PAXBP1-209ENST00000497873 WDR70Q9NW82 654 aa12.51□□□□□ -0.41
PAXBP1-209ENST00000497873 PCDHB8Q9UN66 801 aa12.49□□□□□ -0.41
PAXBP1-209ENST00000497873 PCDHB13Q9Y5F0 798 aa12.49□□□□□ -0.41
PAXBP1-209ENST00000497873 KCNV2Q8TDN2 545 aa12.48□□□□□ -0.41
PAXBP1-209ENST00000497873 PDAP1Q13442 181 aaKnown RBP12.48□□□□□ -0.41
PAXBP1-209ENST00000497873 TULP1O00294 542 aaPredicted RBP12.46□□□□□ -0.42
PAXBP1-209ENST00000497873 TIMELESSQ9UNS1 1208 aa12.46□□□□□ -0.42
PAXBP1-209ENST00000497873 GTF3C3Q9Y5Q9 886 aa12.46□□□□□ -0.42
PAXBP1-209ENST00000497873 FARP1Q9Y4F1 1045 aaPredicted RBP12.43□□□□□ -0.42
PAXBP1-209ENST00000497873 MFRPQ9BY79 579 aa12.42□□□□□ -0.42
PAXBP1-209ENST00000497873 PSEN1P49768 467 aa12.41□□□□□ -0.42
PAXBP1-209ENST00000497873 LMOD2Q6P5Q4 547 aa12.4□□□□□ -0.42
PAXBP1-209ENST00000497873 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.4□□□□□ -0.42
PAXBP1-209ENST00000497873 CCDC61Q9Y6R9 512 aa12.37□□□□□ -0.43
PAXBP1-209ENST00000497873 TMEM132AQ24JP5 1023 aa12.36□□□□□ -0.43
PAXBP1-209ENST00000497873 ZNF579Q8NAF0 562 aaKnown RBP12.35□□□□□ -0.43
PAXBP1-209ENST00000497873 PPP1R37O75864 691 aa12.34□□□□□ -0.43
PAXBP1-209ENST00000497873 PRKAR2AP13861 404 aaKnown RBP12.3□□□□□ -0.44
PAXBP1-209ENST00000497873 EFCAB3Q8N7B9 438 aa12.3□□□□□ -0.44
PAXBP1-209ENST00000497873 IFNL1Q8IU54 200 aa12.29□□□□□ -0.44
PAXBP1-209ENST00000497873 ARHGEF1Q92888 912 aaKnown RBP12.27□□□□□ -0.44
PAXBP1-209ENST00000497873 CABP2Q9NPB3 220 aa12.27□□□□□ -0.44
PAXBP1-209ENST00000497873 FBXO22Q8NEZ5 403 aa12.27□□□□□ -0.45
PAXBP1-209ENST00000497873 E2F4Q16254 413 aa12.26□□□□□ -0.45
PAXBP1-209ENST00000497873 PHF8Q9UPP1 1060 aa12.26□□□□□ -0.45
PAXBP1-209ENST00000497873 NLRP6P59044 892 aa12.26□□□□□ -0.45
PAXBP1-209ENST00000497873 MAP3K13O43283 966 aa12.24□□□□□ -0.45
PAXBP1-209ENST00000497873 PAK3O75914 559 aaPredicted RBP12.23□□□□□ -0.45
PAXBP1-209ENST00000497873 SOX12O15370 315 aa12.22□□□□□ -0.45
PAXBP1-209ENST00000497873 SEMA3EO15041 775 aa12.22□□□□□ -0.45
PAXBP1-209ENST00000497873 ZC3H15Q8WU90 426 aaKnown RBP12.21□□□□□ -0.46
PAXBP1-209ENST00000497873 KIF12Q96FN5 646 aa12.2□□□□□ -0.46
PAXBP1-209ENST00000497873 BRPF1P55201 1214 aaPredicted RBP12.18□□□□□ -0.46
PAXBP1-209ENST00000497873 ERICH6Q7L0X2 663 aa12.18□□□□□ -0.46
PAXBP1-209ENST00000497873 FXR2P51116 673 aaKnown RBP eCLIP12.17□□□□□ -0.46
PAXBP1-209ENST00000497873 TESPA1A2RU30 521 aaPredicted RBP12.17□□□□□ -0.46
PAXBP1-209ENST00000497873 NCKAP5LQ9HCH0 1330 aa12.16□□□□□ -0.46
PAXBP1-209ENST00000497873 LARP6Q9BRS8 491 aaKnown RBP12.15□□□□□ -0.46
PAXBP1-209ENST00000497873 SLC24A3Q9HC58 644 aa12.13□□□□□ -0.47
PAXBP1-209ENST00000497873 C14orf37Q86TY3 774 aa12.11□□□□□ -0.47
PAXBP1-209ENST00000497873 PDE4AP27815 886 aa12.11□□□□□ -0.47
PAXBP1-209ENST00000497873 NEUROD2Q15784 382 aa12.11□□□□□ -0.47
PAXBP1-209ENST00000497873 MS4A4AQ96JQ5 239 aa12.1□□□□□ -0.47
PAXBP1-209ENST00000497873 ZRANB1Q9UGI0 708 aa12.06□□□□□ -0.48
PAXBP1-209ENST00000497873 MFSD10Q14728 455 aa12.06□□□□□ -0.48
PAXBP1-209ENST00000497873 DDX27Q96GQ7 796 aaKnown RBP12.05□□□□□ -0.48
PAXBP1-209ENST00000497873 CRISPLD2Q9H0B8 497 aa12.05□□□□□ -0.48
PAXBP1-209ENST00000497873 SMYD5Q6GMV2 418 aa12.04□□□□□ -0.48
PAXBP1-209ENST00000497873 PHF12Q96QT6 1004 aa12.04□□□□□ -0.48
PAXBP1-209ENST00000497873 PIP4P2Q8N4L2 257 aa12.03□□□□□ -0.48
PAXBP1-209ENST00000497873 ZMYND10O75800 440 aa12.03□□□□□ -0.48
PAXBP1-209ENST00000497873 GOLGA2Q08379 1002 aa12.03□□□□□ -0.48
PAXBP1-209ENST00000497873 TMEM106CQ9BVX2 250 aa12□□□□□ -0.49
PAXBP1-209ENST00000497873 CD44P16070 742 aaKnown RBP11.99□□□□□ -0.49
PAXBP1-209ENST00000497873 CHRDL2Q6WN34 429 aa11.99□□□□□ -0.49
PAXBP1-209ENST00000497873 ARIH1Q9Y4X5 557 aaPredicted RBP11.99□□□□□ -0.49
PAXBP1-209ENST00000497873 CAMK2BQ13554 666 aa11.97□□□□□ -0.49
PAXBP1-209ENST00000497873 ARXQ96QS3 562 aa11.97□□□□□ -0.49
PAXBP1-209ENST00000497873 TRPC6Q9Y210 931 aa11.96□□□□□ -0.49
PAXBP1-209ENST00000497873 MKRN3Q13064 507 aaKnown RBP11.95□□□□□ -0.5
PAXBP1-209ENST00000497873 BARGINQ6ZT62 677 aa11.94□□□□□ -0.5
PAXBP1-209ENST00000497873 RBM26Q5T8P6 1007 aaKnown RBP11.93□□□□□ -0.5
PAXBP1-209ENST00000497873 MLLT3P42568 568 aaPredicted RBP11.93□□□□□ -0.5
PAXBP1-209ENST00000497873 MS4A3Q96HJ5 214 aa11.9□□□□□ -0.5
PAXBP1-209ENST00000497873 PPP1R15BQ5SWA1 713 aa11.89□□□□□ -0.51
PAXBP1-209ENST00000497873 GPIHBP1Q8IV16 184 aa11.88□□□□□ -0.51
PAXBP1-209ENST00000497873 KRI1Q8N9T8 703 aaKnown RBP11.86□□□□□ -0.51
PAXBP1-209ENST00000497873 AK7Q96M32 723 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms