RNA–Protein interactions for RNA: ENST00000496360.5

MACF1-223, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 2,080 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-223ENST00000496360 SYNJ2O15056 1496 aa22.14■■□□□ 1.14
MACF1-223ENST00000496360 RIMBP3CA6NJZ7 1639 aa22.1■■□□□ 1.13
MACF1-223ENST00000496360 RIMBP3BA6NNM3 1639 aa22.1■■□□□ 1.13
MACF1-223ENST00000496360 RIMBP3Q9UFD9 1639 aa22.1■■□□□ 1.13
MACF1-223ENST00000496360 ARHGEF11O15085 1522 aa22.07■■□□□ 1.12
MACF1-223ENST00000496360 YTHDC1Q96MU7 727 aaKnown RBP22.07■■□□□ 1.12
MACF1-223ENST00000496360 MIER1Q8N108 512 aa22.05■■□□□ 1.12
MACF1-223ENST00000496360 ANP32EQ9BTT0 268 aa22.05■■□□□ 1.12
MACF1-223ENST00000496360 CLASP1Q7Z460 1538 aa22.03■■□□□ 1.12
MACF1-223ENST00000496360 ERICH3Q5RHP9 1530 aa22.02■■□□□ 1.12
MACF1-223ENST00000496360 ADAMTS12P58397 1594 aa22.02■■□□□ 1.12
MACF1-223ENST00000496360 FHAD1B1AJZ9 1412 aa21.99■■□□□ 1.11
MACF1-223ENST00000496360 GRIN2AQ12879 1464 aa21.98■■□□□ 1.11
MACF1-223ENST00000496360 TNIKQ9UKE5 1360 aa21.96■■□□□ 1.11
MACF1-223ENST00000496360 CEP162Q5TB80 1403 aa21.96■■□□□ 1.11
MACF1-223ENST00000496360 EHMT2Q96KQ7 1210 aa21.96■■□□□ 1.11
MACF1-223ENST00000496360 BCL11AQ9H165 835 aa21.92■■□□□ 1.1
MACF1-223ENST00000496360 KIF27Q86VH2 1401 aa21.91■■□□□ 1.1
MACF1-223ENST00000496360 SUPT16HQ9Y5B9 1047 aaKnown RBP21.9■■□□□ 1.1
MACF1-223ENST00000496360 NUP160Q12769 1436 aa21.9■■□□□ 1.1
MACF1-223ENST00000496360 EEA1Q15075 1411 aa21.9■■□□□ 1.1
MACF1-223ENST00000496360 ARAP1Q96P48 1450 aa21.89■■□□□ 1.1
MACF1-223ENST00000496360 CYB5RLQ6IPT4 315 aa21.89■■□□□ 1.09
MACF1-223ENST00000496360 CEP170Q5SW79 1584 aa21.87■■□□□ 1.09
MACF1-223ENST00000496360 IGF1RP08069 1367 aa21.84■■□□□ 1.09
MACF1-223ENST00000496360 TSHZ2Q9NRE2 1034 aa21.83■■□□□ 1.08
MACF1-223ENST00000496360 CUL7Q14999 1698 aa21.79■■□□□ 1.08
MACF1-223ENST00000496360 SHROOM2Q13796 1616 aa21.74■■□□□ 1.07
MACF1-223ENST00000496360 CARMIL1Q5VZK9 1371 aa21.71■■□□□ 1.07
MACF1-223ENST00000496360 ERCC6L2Q5T890 1561 aa21.71■■□□□ 1.07
MACF1-223ENST00000496360 RUSC2Q8N2Y8 1516 aa21.69■■□□□ 1.06
MACF1-223ENST00000496360 JPH4Q96JJ6 628 aa21.67■■□□□ 1.06
MACF1-223ENST00000496360 GOLGA3Q08378 1498 aa21.66■■□□□ 1.06
MACF1-223ENST00000496360 PRG4Q92954 1404 aaPredicted RBP21.64■■□□□ 1.05
MACF1-223ENST00000496360 KIAA0586Q9BVV6 1533 aa21.64■■□□□ 1.05
MACF1-223ENST00000496360 CSRNP3Q8WYN3 585 aa21.58■■□□□ 1.05
MACF1-223ENST00000496360 RAPGEF2Q9Y4G8 1499 aa21.56■■□□□ 1.04
MACF1-223ENST00000496360 TRHP20396 242 aaPredicted RBP21.5■■□□□ 1.03
MACF1-223ENST00000496360 HNRNPUL2Q1KMD3 747 aaKnown RBP21.49■■□□□ 1.03
MACF1-223ENST00000496360 IQGAP2Q13576 1575 aa21.48■■□□□ 1.03
MACF1-223ENST00000496360 UBTFP17480 764 aaKnown RBP21.48■■□□□ 1.03
MACF1-223ENST00000496360 VPS8Q8N3P4 1428 aa21.46■■□□□ 1.03
MACF1-223ENST00000496360 KIF21BO75037 1637 aa21.46■■□□□ 1.03
MACF1-223ENST00000496360 PRXQ9BXM0 1461 aa21.44■■□□□ 1.02
MACF1-223ENST00000496360 CARMIL2Q6F5E8 1435 aa21.41■■□□□ 1.02
MACF1-223ENST00000496360 DHX57Q6P158 1386 aaKnown RBP21.4■■□□□ 1.02
MACF1-223ENST00000496360 UGGT2Q9NYU1 1516 aa21.37■■□□□ 1.01
MACF1-223ENST00000496360 CLIP1P30622 1438 aa21.37■■□□□ 1.01
MACF1-223ENST00000496360 PTPRGP23470 1445 aa21.36■■□□□ 1.01
MACF1-223ENST00000496360 MYT1LQ9UL68 1186 aa21.36■■□□□ 1.01
MACF1-223ENST00000496360 APLP2Q06481 763 aa21.35■■□□□ 1.01
MACF1-223ENST00000496360 DISP1Q96F81 1524 aa21.35■■□□□ 1.01
MACF1-223ENST00000496360 CTTNBP2Q8WZ74 1663 aa21.35■■□□□ 1.01
MACF1-223ENST00000496360 ADCY10Q96PN6 1610 aa21.33■■□□□ 1.01
MACF1-223ENST00000496360 RBM19Q9Y4C8 960 aaKnown RBP21.31■■□□□ 1
MACF1-223ENST00000496360 NPM1P06748 294 aaKnown RBP eCLIP21.3■■□□□ 1
MACF1-223ENST00000496360 KIAA0556O60303 1618 aa21.28■■□□□ 1
MACF1-223ENST00000496360 NEFLP07196 543 aa21.27■□□□□ 0.99
MACF1-223ENST00000496360 MAPKBP1O60336 1514 aa21.24■□□□□ 0.99
MACF1-223ENST00000496360 FKBP8Q14318 412 aa21.22■□□□□ 0.99
MACF1-223ENST00000496360 UACAQ9BZF9 1416 aa21.22■□□□□ 0.99
MACF1-223ENST00000496360 FANCIQ9NVI1 1328 aa21.21■□□□□ 0.99
MACF1-223ENST00000496360 UHRF1BP1LA0JNW5 1464 aa21.21■□□□□ 0.99
MACF1-223ENST00000496360 ABCC2Q92887 1545 aa21.19■□□□□ 0.98
MACF1-223ENST00000496360 KIF13AQ9H1H9 1805 aa21.18■□□□□ 0.98
MACF1-223ENST00000496360 ABCC10Q5T3U5 1492 aa21.17■□□□□ 0.98
MACF1-223ENST00000496360 RRBP1Q9P2E9 1410 aaKnown RBP21.14■□□□□ 0.97
MACF1-223ENST00000496360 FAM69CQ0P6D2 419 aa21.13■□□□□ 0.97
MACF1-223ENST00000496360 DIP2BQ9P265 1576 aa21.13■□□□□ 0.97
MACF1-223ENST00000496360 CCER2I3L3R5 266 aa21.1■□□□□ 0.97
MACF1-223ENST00000496360 KDM5BQ9UGL1 1544 aa21.1■□□□□ 0.97
MACF1-223ENST00000496360 BCANQ96GW7 911 aa21.09■□□□□ 0.97
MACF1-223ENST00000496360 PLB1Q6P1J6 1458 aa21.09■□□□□ 0.97
MACF1-223ENST00000496360 ASXL2Q76L83 1435 aa21.08■□□□□ 0.96
MACF1-223ENST00000496360 ERICH6Q7L0X2 663 aa21.08■□□□□ 0.96
MACF1-223ENST00000496360 SAMD9Q5K651 1589 aa21.08■□□□□ 0.96
MACF1-223ENST00000496360 P3H3Q8IVL6 736 aa21.07■□□□□ 0.96
MACF1-223ENST00000496360 ABCA8O94911 1581 aa21.07■□□□□ 0.96
MACF1-223ENST00000496360 ZCCHC11Q5TAX3 1644 aaKnown RBP21.05■□□□□ 0.96
MACF1-223ENST00000496360 MSH5O43196 834 aa21.01■□□□□ 0.95
MACF1-223ENST00000496360 PRKCSHP14314 528 aaPredicted RBP21.01■□□□□ 0.95
MACF1-223ENST00000496360 RANGAP1P46060 587 aaPredicted RBP21.01■□□□□ 0.95
MACF1-223ENST00000496360 ERICH6BQ5W0A0 696 aa20.99■□□□□ 0.95
MACF1-223ENST00000496360 TIMELESSQ9UNS1 1208 aa20.99■□□□□ 0.95
MACF1-223ENST00000496360 GLI2P10070 1586 aa20.98■□□□□ 0.95
MACF1-223ENST00000496360 KCNH8Q96L42 1107 aa20.97■□□□□ 0.95
MACF1-223ENST00000496360 EFCAB5A4FU69 1503 aa20.95■□□□□ 0.95
MACF1-223ENST00000496360 EPRSP07814 1512 aaKnown RBP20.95■□□□□ 0.95
MACF1-223ENST00000496360 CDK11AQ9UQ88 783 aaPredicted RBP20.95■□□□□ 0.94
MACF1-223ENST00000496360 FHOD3Q2V2M9 1422 aa20.95■□□□□ 0.94
MACF1-223ENST00000496360 WDR7Q9Y4E6 1490 aa20.94■□□□□ 0.94
MACF1-223ENST00000496360 TSPOAP1O95153 1857 aa20.94■□□□□ 0.94
MACF1-223ENST00000496360 CCNB3Q8WWL7 1395 aa20.92■□□□□ 0.94
MACF1-223ENST00000496360 PPP1R15AO75807 674 aaPredicted RBP20.91■□□□□ 0.94
MACF1-223ENST00000496360 RAPGEF6Q8TEU7 1601 aa20.91■□□□□ 0.94
MACF1-223ENST00000496360 ATP10BO94823 1461 aa20.9■□□□□ 0.94
MACF1-223ENST00000496360 ARID3CA6NKF2 412 aa20.89■□□□□ 0.93
MACF1-223ENST00000496360 MAP3K4Q9Y6R4 1608 aa20.86■□□□□ 0.93
MACF1-223ENST00000496360 ANP32CO43423 234 aa20.86■□□□□ 0.93
MACF1-223ENST00000496360 PPRC1Q5VV67 1664 aaKnown RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms