RNA–Protein interactions for RNA: ENST00000494504.5

KATNA1-208, Transcript of katanin catalytic subunit A1, humanhuman

TSL 5

Gene KATNA1, Length 765 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-208ENST00000494504 RIMBP3BA6NNM3 1639 aa14.4□□□□□ -0.1
KATNA1-208ENST00000494504 RIMBP3Q9UFD9 1639 aa14.4□□□□□ -0.1
KATNA1-208ENST00000494504 CLEC11AQ9Y240 323 aa14.39□□□□□ -0.11
KATNA1-208ENST00000494504 CYB5RLQ6IPT4 315 aa14.38□□□□□ -0.11
KATNA1-208ENST00000494504 SSUH2Q9Y2M2 353 aa14.38□□□□□ -0.11
KATNA1-208ENST00000494504 WDR62O43379 1518 aa14.37□□□□□ -0.11
KATNA1-208ENST00000494504 CADPSQ9ULU8 1353 aa14.34□□□□□ -0.11
KATNA1-208ENST00000494504 PRKAR2AP13861 404 aaKnown RBP14.31□□□□□ -0.12
KATNA1-208ENST00000494504 ARHGEF11O15085 1522 aa14.3□□□□□ -0.12
KATNA1-208ENST00000494504 CEP164Q9UPV0 1460 aa14.24□□□□□ -0.13
KATNA1-208ENST00000494504 CSRNP3Q8WYN3 585 aa14.21□□□□□ -0.13
KATNA1-208ENST00000494504 PEG3Q9GZU2 1588 aa14.21□□□□□ -0.14
KATNA1-208ENST00000494504 EVX2Q03828 476 aa14.2□□□□□ -0.14
KATNA1-208ENST00000494504 FANCD2Q9BXW9 1451 aa14.18□□□□□ -0.14
KATNA1-208ENST00000494504 MROH2BQ7Z745 1585 aa14.16□□□□□ -0.14
KATNA1-208ENST00000494504 PRR29P0C7W0 189 aa14.13□□□□□ -0.15
KATNA1-208ENST00000494504 ARAP1Q96P48 1450 aa14.12□□□□□ -0.15
KATNA1-208ENST00000494504 URB2Q14146 1524 aaKnown RBP14.1□□□□□ -0.15
KATNA1-208ENST00000494504 C19orf67A6NJJ6 358 aa14.1□□□□□ -0.15
KATNA1-208ENST00000494504 CHADLQ6NUI6 762 aa14.09□□□□□ -0.15
KATNA1-208ENST00000494504 ZNF608Q9ULD9 1512 aaPredicted RBP14.09□□□□□ -0.15
KATNA1-208ENST00000494504 EHMT2Q96KQ7 1210 aa14.07□□□□□ -0.16
KATNA1-208ENST00000494504 ILDR1Q86SU0 546 aaPredicted RBP14.05□□□□□ -0.16
KATNA1-208ENST00000494504 CFTRP13569 1480 aa13.99□□□□□ -0.17
KATNA1-208ENST00000494504 IFT140Q96RY7 1462 aa13.97□□□□□ -0.17
KATNA1-208ENST00000494504 WIZO95785 1651 aa13.94□□□□□ -0.18
KATNA1-208ENST00000494504 RSF1Q96T23 1441 aaPredicted RBP13.93□□□□□ -0.18
KATNA1-208ENST00000494504 GABBR2O75899 941 aa13.92□□□□□ -0.18
KATNA1-208ENST00000494504 CHD1O14646 1710 aa13.91□□□□□ -0.18
KATNA1-208ENST00000494504 AQRO60306 1485 aaKnown RBP eCLIP13.9□□□□□ -0.18
KATNA1-208ENST00000494504 FARP1Q9Y4F1 1045 aaPredicted RBP13.89□□□□□ -0.19
KATNA1-208ENST00000494504 EIF4G3O43432 1585 aaKnown RBP13.88□□□□□ -0.19
KATNA1-208ENST00000494504 CD44P16070 742 aaKnown RBP13.85□□□□□ -0.19
KATNA1-208ENST00000494504 TOPBP1Q92547 1522 aa13.82□□□□□ -0.2
KATNA1-208ENST00000494504 STAG3Q9UJ98 1225 aa13.82□□□□□ -0.2
KATNA1-208ENST00000494504 SPDYE4A6NLX3 237 aa13.78□□□□□ -0.2
KATNA1-208ENST00000494504 CHMP7Q8WUX9 453 aaPredicted RBP13.77□□□□□ -0.21
KATNA1-208ENST00000494504 TDRD9Q8NDG6 1382 aaKnown RBP13.73□□□□□ -0.21
KATNA1-208ENST00000494504 CLASP1Q7Z460 1538 aa13.73□□□□□ -0.21
KATNA1-208ENST00000494504 CLCN6P51797 869 aa13.72□□□□□ -0.21
KATNA1-208ENST00000494504 GAPVD1Q14C86 1478 aa13.72□□□□□ -0.21
KATNA1-208ENST00000494504 KDM4FA0A1W2PPD8 638 aa13.7□□□□□ -0.22
KATNA1-208ENST00000494504 CREBZFQ9NS37 354 aa13.7□□□□□ -0.22
KATNA1-208ENST00000494504 TARBP1Q13395 1621 aaKnown RBP13.7□□□□□ -0.22
KATNA1-208ENST00000494504 SNAPC4Q5SXM2 1469 aa13.68□□□□□ -0.22
KATNA1-208ENST00000494504 RAD54L2Q9Y4B4 1467 aa13.67□□□□□ -0.22
KATNA1-208ENST00000494504 ABCC8Q09428 1581 aa13.67□□□□□ -0.22
KATNA1-208ENST00000494504 LHX8Q68G74 356 aa13.67□□□□□ -0.22
KATNA1-208ENST00000494504 TOP2AP11388 1531 aaKnown RBP13.66□□□□□ -0.22
KATNA1-208ENST00000494504 SYNJ1O43426 1573 aa13.66□□□□□ -0.22
KATNA1-208ENST00000494504 DNMBPQ6XZF7 1577 aa13.66□□□□□ -0.22
KATNA1-208ENST00000494504 ZRANB1Q9UGI0 708 aa13.64□□□□□ -0.23
KATNA1-208ENST00000494504 PRDM2Q13029 1718 aa13.64□□□□□ -0.23
KATNA1-208ENST00000494504 POLA1P09884 1462 aaPredicted RBP13.63□□□□□ -0.23
KATNA1-208ENST00000494504 ZNF579Q8NAF0 562 aaKnown RBP13.62□□□□□ -0.23
KATNA1-208ENST00000494504 SOGA1O94964 1423 aa13.61□□□□□ -0.23
KATNA1-208ENST00000494504 CCDC88BA6NC98 1476 aa13.6□□□□□ -0.23
KATNA1-208ENST00000494504 POTEIP0CG38 1075 aa13.58□□□□□ -0.24
KATNA1-208ENST00000494504 DCBLD2Q96PD2 775 aa13.58□□□□□ -0.24
KATNA1-208ENST00000494504 ERCC6L2Q5T890 1561 aa13.55□□□□□ -0.24
KATNA1-208ENST00000494504 PAK3O75914 559 aaPredicted RBP13.55□□□□□ -0.24
KATNA1-208ENST00000494504 FAM69CQ0P6D2 419 aa13.55□□□□□ -0.24
KATNA1-208ENST00000494504 SYNJ2O15056 1496 aa13.55□□□□□ -0.24
KATNA1-208ENST00000494504 MAGI1Q96QZ7 1491 aaPredicted RBP13.55□□□□□ -0.24
KATNA1-208ENST00000494504 NPM1P06748 294 aaKnown RBP eCLIP13.52□□□□□ -0.25
KATNA1-208ENST00000494504 GRIN2BQ13224 1484 aa13.52□□□□□ -0.25
KATNA1-208ENST00000494504 KIF13AQ9H1H9 1805 aa13.5□□□□□ -0.25
KATNA1-208ENST00000494504 FGD5Q6ZNL6 1462 aa13.47□□□□□ -0.25
KATNA1-208ENST00000494504 GALR2O43603 387 aaPredicted RBP13.44□□□□□ -0.26
KATNA1-208ENST00000494504 MNX1P50219 401 aaPredicted RBP13.43□□□□□ -0.26
KATNA1-208ENST00000494504 CEP170Q5SW79 1584 aa13.41□□□□□ -0.26
KATNA1-208ENST00000494504 PHF12Q96QT6 1004 aa13.41□□□□□ -0.26
KATNA1-208ENST00000494504 KDM6BO15054 1643 aa13.41□□□□□ -0.26
KATNA1-208ENST00000494504 WDR97A6NE52 1622 aa13.4□□□□□ -0.26
KATNA1-208ENST00000494504 FBXO41Q8TF61 875 aa13.39□□□□□ -0.27
KATNA1-208ENST00000494504 ABCC10Q5T3U5 1492 aa13.39□□□□□ -0.27
KATNA1-208ENST00000494504 HECW2Q9P2P5 1572 aa13.38□□□□□ -0.27
KATNA1-208ENST00000494504 PROM2Q8N271 834 aa13.38□□□□□ -0.27
KATNA1-208ENST00000494504 ADGRL1O94910 1474 aa13.36□□□□□ -0.27
KATNA1-208ENST00000494504 PBRM1Q86U86 1689 aa13.34□□□□□ -0.27
KATNA1-208ENST00000494504 GRIN2AQ12879 1464 aa13.34□□□□□ -0.27
KATNA1-208ENST00000494504 CUX1P39880 1505 aa13.33□□□□□ -0.28
KATNA1-208ENST00000494504 PRG4Q92954 1404 aaPredicted RBP13.32□□□□□ -0.28
KATNA1-208ENST00000494504 TSPOAP1O95153 1857 aa13.31□□□□□ -0.28
KATNA1-208ENST00000494504 DIP2BQ9P265 1576 aa13.31□□□□□ -0.28
KATNA1-208ENST00000494504 NUP160Q12769 1436 aa13.3□□□□□ -0.28
KATNA1-208ENST00000494504 LMTK3Q96Q04 1460 aa13.28□□□□□ -0.28
KATNA1-208ENST00000494504 JPH4Q96JJ6 628 aa13.27□□□□□ -0.29
KATNA1-208ENST00000494504 SHROOM2Q13796 1616 aa13.26□□□□□ -0.29
KATNA1-208ENST00000494504 MAPKBP1O60336 1514 aa13.25□□□□□ -0.29
KATNA1-208ENST00000494504 PLEKHG5O94827 1062 aa13.25□□□□□ -0.29
KATNA1-208ENST00000494504 TSPYL2Q9H2G4 693 aaPredicted RBP13.24□□□□□ -0.29
KATNA1-208ENST00000494504 ABCA5Q8WWZ7 1642 aa13.22□□□□□ -0.29
KATNA1-208ENST00000494504 MS4A3Q96HJ5 214 aa13.22□□□□□ -0.29
KATNA1-208ENST00000494504 ABCA10Q8WWZ4 1543 aa13.22□□□□□ -0.29
KATNA1-208ENST00000494504 ADAMTS12P58397 1594 aa13.2□□□□□ -0.3
KATNA1-208ENST00000494504 ILDR2Q71H61 639 aa13.2□□□□□ -0.3
KATNA1-208ENST00000494504 TTBK1Q5TCY1 1321 aaPredicted RBP13.19□□□□□ -0.3
KATNA1-208ENST00000494504 MIER1Q8N108 512 aa13.19□□□□□ -0.3
KATNA1-208ENST00000494504 ADCY10Q96PN6 1610 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms