RNA–Protein interactions for RNA: ENST00000494504.5

KATNA1-208, Transcript of katanin catalytic subunit A1, humanhuman

TSL 5

Gene KATNA1, Length 765 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-208ENST00000494504 AEBP2Q6ZN18 517 aaPredicted RBP26.94■■□□□ 1.9
KATNA1-208ENST00000494504 CHIC1Q5VXU3 224 aa25.5■■□□□ 1.67
KATNA1-208ENST00000494504 SENP3Q9H4L4 574 aaPredicted RBP23.1■■□□□ 1.29
KATNA1-208ENST00000494504 PHF23Q9BUL5 403 aaPredicted RBP22.73■■□□□ 1.23
KATNA1-208ENST00000494504 FOXD1Q16676 465 aa21.48■■□□□ 1.03
KATNA1-208ENST00000494504 PLPPR3Q6T4P5 718 aa20.36■□□□□ 0.85
KATNA1-208ENST00000494504 MSH5O43196 834 aa20.23■□□□□ 0.83
KATNA1-208ENST00000494504 PIAS4Q8N2W9 510 aaPredicted RBP20.1■□□□□ 0.81
KATNA1-208ENST00000494504 PPP6R1Q9UPN7 881 aa19.95■□□□□ 0.78
KATNA1-208ENST00000494504 ADRA2BP18089 450 aa19.92■□□□□ 0.78
KATNA1-208ENST00000494504 POTEDQ86YR6 584 aa19.92■□□□□ 0.78
KATNA1-208ENST00000494504 NISCHQ9Y2I1 1504 aa18.32■□□□□ 0.52
KATNA1-208ENST00000494504 SCAF1Q9H7N4 1312 aaKnown RBP18.31■□□□□ 0.52
KATNA1-208ENST00000494504 MAPK8IP2Q13387 824 aaPredicted RBP18.31■□□□□ 0.52
KATNA1-208ENST00000494504 DMRT2Q9Y5R5 561 aa18.27■□□□□ 0.52
KATNA1-208ENST00000494504 PPP4R3CPQ6ZMV5 832 aa17.8■□□□□ 0.44
KATNA1-208ENST00000494504 DCAF8L1A6NGE4 600 aa17.58■□□□□ 0.4
KATNA1-208ENST00000494504 ABCC9O60706 1549 aa17.56■□□□□ 0.4
KATNA1-208ENST00000494504 HOXD11P31277 338 aaPredicted RBP17.53■□□□□ 0.4
KATNA1-208ENST00000494504 CNKSR2Q8WXI2 1034 aa17.51■□□□□ 0.39
KATNA1-208ENST00000494504 CACNB1Q02641 598 aaPredicted RBP17.44■□□□□ 0.38
KATNA1-208ENST00000494504 RNF216Q9NWF9 866 aaPredicted RBP17.38■□□□□ 0.37
KATNA1-208ENST00000494504 RNF39Q9H2S5 420 aa17.21■□□□□ 0.35
KATNA1-208ENST00000494504 DNAJC5BQ9UF47 199 aa17.16■□□□□ 0.34
KATNA1-208ENST00000494504 NCBP3Q53F19 620 aaKnown RBP17.14■□□□□ 0.33
KATNA1-208ENST00000494504 C1QBPQ07021 282 aaKnown RBP16.98■□□□□ 0.31
KATNA1-208ENST00000494504 NPM3O75607 178 aaKnown RBP16.81■□□□□ 0.28
KATNA1-208ENST00000494504 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.76■□□□□ 0.27
KATNA1-208ENST00000494504 CCDC180Q9P1Z9 1646 aa16.61■□□□□ 0.25
KATNA1-208ENST00000494504 KCNA4P22459 653 aa16.37■□□□□ 0.21
KATNA1-208ENST00000494504 PABPN1Q86U42 306 aaKnown RBP eCLIP16.33■□□□□ 0.2
KATNA1-208ENST00000494504 U3KPZ7 1027 aaPredicted RBP16.33■□□□□ 0.2
KATNA1-208ENST00000494504 RB1CC1Q8TDY2 1594 aa16.25■□□□□ 0.19
KATNA1-208ENST00000494504 DNAJC5Q9H3Z4 198 aa16.2■□□□□ 0.18
KATNA1-208ENST00000494504 CAPN15O75808 1086 aa16.18■□□□□ 0.18
KATNA1-208ENST00000494504 SPINK5Q9NQ38 1064 aaPredicted RBP16.14■□□□□ 0.17
KATNA1-208ENST00000494504 SLC4A2P04920 1241 aa16.07■□□□□ 0.16
KATNA1-208ENST00000494504 DCAF8L2P0C7V8 631 aa16.06■□□□□ 0.16
KATNA1-208ENST00000494504 DSG3P32926 999 aa16.06■□□□□ 0.16
KATNA1-208ENST00000494504 APLP2Q06481 763 aa15.98■□□□□ 0.15
KATNA1-208ENST00000494504 NACADO15069 1562 aa15.94■□□□□ 0.14
KATNA1-208ENST00000494504 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.91■□□□□ 0.14
KATNA1-208ENST00000494504 HNRNPUL2Q1KMD3 747 aaKnown RBP15.91■□□□□ 0.14
KATNA1-208ENST00000494504 TRHP20396 242 aaPredicted RBP15.87■□□□□ 0.13
KATNA1-208ENST00000494504 ZNF219Q9P2Y4 722 aaPredicted RBP15.86■□□□□ 0.13
KATNA1-208ENST00000494504 CECR2Q9BXF3 1484 aa15.84■□□□□ 0.13
KATNA1-208ENST00000494504 UNC13AQ9UPW8 1703 aa15.83■□□□□ 0.13
KATNA1-208ENST00000494504 BICRAQ9NZM4 1560 aa15.82■□□□□ 0.12
KATNA1-208ENST00000494504 SAMD1Q6SPF0 538 aaPredicted RBP15.8■□□□□ 0.12
KATNA1-208ENST00000494504 ABCB7O75027 752 aa15.76■□□□□ 0.11
KATNA1-208ENST00000494504 CC2D2AQ9P2K1 1620 aa15.72■□□□□ 0.11
KATNA1-208ENST00000494504 POTEHQ6S545 545 aa15.61■□□□□ 0.09
KATNA1-208ENST00000494504 MYCNP04198 464 aaPredicted RBP15.6■□□□□ 0.09
KATNA1-208ENST00000494504 EIF4G1Q04637 1599 aaKnown RBP15.5■□□□□ 0.07
KATNA1-208ENST00000494504 SLC4A1APQ9BWU0 796 aaKnown RBP15.47■□□□□ 0.07
KATNA1-208ENST00000494504 MYO15BQ96JP2 1530 aa15.41■□□□□ 0.06
KATNA1-208ENST00000494504 POLA2Q14181 598 aa15.4■□□□□ 0.06
KATNA1-208ENST00000494504 RBM42Q9BTD8 480 aaKnown RBP15.4■□□□□ 0.06
KATNA1-208ENST00000494504 SHROOM4Q9ULL8 1493 aa15.4■□□□□ 0.06
KATNA1-208ENST00000494504 TRIM41Q8WV44 630 aa15.35■□□□□ 0.05
KATNA1-208ENST00000494504 FOXD4L1Q9NU39 408 aa15.35■□□□□ 0.05
KATNA1-208ENST00000494504 CUX2O14529 1486 aa15.28■□□□□ 0.04
KATNA1-208ENST00000494504 SCRIBQ14160 1630 aa15.28■□□□□ 0.04
KATNA1-208ENST00000494504 ERCC6Q03468 1493 aa15.2■□□□□ 0.02
KATNA1-208ENST00000494504 ATF5Q9Y2D1 282 aaPredicted RBP15.18■□□□□ 0.02
KATNA1-208ENST00000494504 ZBTB12Q9Y330 459 aaPredicted RBP15.14■□□□□ 0.01
KATNA1-208ENST00000494504 CHRDL2Q6WN34 429 aa15.08■□□□□ 0
KATNA1-208ENST00000494504 ZBTB22O15209 634 aa15.01□□□□□ -0.01
KATNA1-208ENST00000494504 ZCCHC6Q5VYS8 1495 aaKnown RBP15.01□□□□□ -0.01
KATNA1-208ENST00000494504 AKT1S1Q96B36 256 aa14.99□□□□□ -0.01
KATNA1-208ENST00000494504 DCAF1Q9Y4B6 1507 aa14.98□□□□□ -0.01
KATNA1-208ENST00000494504 ATXN8OSP0DMR3 200 aa14.91□□□□□ -0.02
KATNA1-208ENST00000494504 OSCARQ8IYS5 282 aa14.91□□□□□ -0.02
KATNA1-208ENST00000494504 NESP48681 1621 aa14.88□□□□□ -0.03
KATNA1-208ENST00000494504 REM2Q8IYK8 340 aaPredicted RBP14.82□□□□□ -0.04
KATNA1-208ENST00000494504 NCAPD3P42695 1498 aa14.77□□□□□ -0.04
KATNA1-208ENST00000494504 THOC2Q8NI27 1593 aaKnown RBP14.73□□□□□ -0.05
KATNA1-208ENST00000494504 SMARCA2P51531 1590 aa14.7□□□□□ -0.06
KATNA1-208ENST00000494504 FBLN2P98095 1184 aa14.7□□□□□ -0.06
KATNA1-208ENST00000494504 PITPNM1O00562 1244 aa14.67□□□□□ -0.06
KATNA1-208ENST00000494504 PIP4P2Q8N4L2 257 aa14.67□□□□□ -0.06
KATNA1-208ENST00000494504 ATAD2BQ9ULI0 1458 aa14.66□□□□□ -0.06
KATNA1-208ENST00000494504 SPDYE2BA6NHP3 402 aa14.62□□□□□ -0.07
KATNA1-208ENST00000494504 SPDYE6P0CI01 402 aa14.62□□□□□ -0.07
KATNA1-208ENST00000494504 SPDYE2Q495Y8 402 aa14.62□□□□□ -0.07
KATNA1-208ENST00000494504 SP7Q8TDD2 431 aaPredicted RBP14.57□□□□□ -0.08
KATNA1-208ENST00000494504 FXR2P51116 673 aaKnown RBP eCLIP14.55□□□□□ -0.08
KATNA1-208ENST00000494504 KIF21AQ7Z4S6 1674 aa14.55□□□□□ -0.08
KATNA1-208ENST00000494504 HMGXB3Q12766 1538 aa14.54□□□□□ -0.08
KATNA1-208ENST00000494504 PDS5BQ9NTI5 1447 aa14.53□□□□□ -0.08
KATNA1-208ENST00000494504 BAZ1AQ9NRL2 1556 aaPredicted RBP14.51□□□□□ -0.09
KATNA1-208ENST00000494504 LAMC3Q9Y6N6 1575 aa14.51□□□□□ -0.09
KATNA1-208ENST00000494504 BAZ1BQ9UIG0 1483 aaKnown RBP14.5□□□□□ -0.09
KATNA1-208ENST00000494504 HAX1O00165 279 aa14.48□□□□□ -0.09
KATNA1-208ENST00000494504 MKRN4PQ13434 485 aaPredicted RBP14.48□□□□□ -0.09
KATNA1-208ENST00000494504 MRC2Q9UBG0 1479 aa14.44□□□□□ -0.1
KATNA1-208ENST00000494504 ZNF692Q9BU19 519 aaPredicted RBP14.43□□□□□ -0.1
KATNA1-208ENST00000494504 SMARCA4P51532 1647 aa14.42□□□□□ -0.1
KATNA1-208ENST00000494504 SPDYE1Q8NFV5 336 aaPredicted RBP14.41□□□□□ -0.1
KATNA1-208ENST00000494504 RIMBP3CA6NJZ7 1639 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms