RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 SMARCA4P51532 1647 aa8.99□□□□□ -0.97
CCDC6-202ENST00000491922 ANP32CO43423 234 aa8.98□□□□□ -0.97
CCDC6-202ENST00000491922 TRIM52Q96A61 297 aa8.98□□□□□ -0.97
CCDC6-202ENST00000491922 ANO8Q9HCE9 1232 aaPredicted RBP8.98□□□□□ -0.97
CCDC6-202ENST00000491922 MAPKBP1O60336 1514 aa8.98□□□□□ -0.97
CCDC6-202ENST00000491922 RAPGEF2Q9Y4G8 1499 aa8.96□□□□□ -0.98
CCDC6-202ENST00000491922 WDR97A6NE52 1622 aa8.96□□□□□ -0.98
CCDC6-202ENST00000491922 SYNJ1O43426 1573 aa8.95□□□□□ -0.98
CCDC6-202ENST00000491922 NOP58Q9Y2X3 529 aaKnown RBP8.94□□□□□ -0.98
CCDC6-202ENST00000491922 CCNB3Q8WWL7 1395 aa8.94□□□□□ -0.98
CCDC6-202ENST00000491922 TIMELESSQ9UNS1 1208 aa8.94□□□□□ -0.98
CCDC6-202ENST00000491922 EIF5BO60841 1220 aaKnown RBP8.93□□□□□ -0.98
CCDC6-202ENST00000491922 PPP4R2Q9NY27 417 aa8.93□□□□□ -0.98
CCDC6-202ENST00000491922 ARAP1Q96P48 1450 aa8.93□□□□□ -0.98
CCDC6-202ENST00000491922 RAB3GAP2Q9H2M9 1393 aa8.92□□□□□ -0.98
CCDC6-202ENST00000491922 ERICH3Q5RHP9 1530 aa8.91□□□□□ -0.98
CCDC6-202ENST00000491922 SALL2Q9Y467 1007 aaPredicted RBP8.9□□□□□ -0.98
CCDC6-202ENST00000491922 KANK4Q5T7N3 995 aaPredicted RBP8.9□□□□□ -0.98
CCDC6-202ENST00000491922 RTL5Q5HYW3 569 aaPredicted RBP8.89□□□□□ -0.99
CCDC6-202ENST00000491922 NBR1Q14596 966 aa8.88□□□□□ -0.99
CCDC6-202ENST00000491922 SETD5Q9C0A6 1442 aa8.88□□□□□ -0.99
CCDC6-202ENST00000491922 IRX6P78412 446 aaPredicted RBP8.87□□□□□ -0.99
CCDC6-202ENST00000491922 UBE2Q2Q8WVN8 375 aa8.87□□□□□ -0.99
CCDC6-202ENST00000491922 HNRNPUQ00839 825 aaKnown RBP eCLIP8.87□□□□□ -0.99
CCDC6-202ENST00000491922 RANGAP1P46060 587 aaPredicted RBP8.85□□□□□ -0.99
CCDC6-202ENST00000491922 PAK3O75914 559 aaPredicted RBP8.84□□□□□ -0.99
CCDC6-202ENST00000491922 PRXQ9BXM0 1461 aa8.83□□□□□ -1
CCDC6-202ENST00000491922 ANP32AP39687 249 aaKnown RBP8.83□□□□□ -1
CCDC6-202ENST00000491922 IPO9Q96P70 1041 aaKnown RBP8.83□□□□□ -1
CCDC6-202ENST00000491922 SIN3AQ96ST3 1273 aa8.83□□□□□ -1
CCDC6-202ENST00000491922 MAP3K1Q13233 1512 aa8.82□□□□□ -1
CCDC6-202ENST00000491922 TOP2BQ02880 1626 aa8.81□□□□□ -1
CCDC6-202ENST00000491922 ERCC6Q03468 1493 aa8.81□□□□□ -1
CCDC6-202ENST00000491922 IL27Q8NEV9 243 aa8.81□□□□□ -1
CCDC6-202ENST00000491922 ZBTB47Q9UFB7 747 aaPredicted RBP8.81□□□□□ -1
CCDC6-202ENST00000491922 B4GALNT3Q6L9W6 998 aa8.8□□□□□ -1
CCDC6-202ENST00000491922 CCDC136Q96JN2 1154 aa8.8□□□□□ -1
CCDC6-202ENST00000491922 WASHC2AQ641Q2 1341 aa8.8□□□□□ -1
CCDC6-202ENST00000491922 HIRIP3Q9BW71 556 aaPredicted RBP8.8□□□□□ -1
CCDC6-202ENST00000491922 PEG3Q9GZU2 1588 aa8.79□□□□□ -1
CCDC6-202ENST00000491922 BIVM-ERCC5R4GMW8 1640 aa8.79□□□□□ -1
CCDC6-202ENST00000491922 TIAM1Q13009 1591 aa8.79□□□□□ -1
CCDC6-202ENST00000491922 PIAS4Q8N2W9 510 aaPredicted RBP8.79□□□□□ -1
CCDC6-202ENST00000491922 USP35Q9P2H5 1018 aa8.78□□□□□ -1
CCDC6-202ENST00000491922 C11orf95C9JLR9 678 aaPredicted RBP8.78□□□□□ -1
CCDC6-202ENST00000491922 FHAD1B1AJZ9 1412 aa8.77□□□□□ -1.01
CCDC6-202ENST00000491922 ARHGAP35Q9NRY4 1499 aa8.77□□□□□ -1.01
CCDC6-202ENST00000491922 TONSLQ96HA7 1378 aa8.76□□□□□ -1.01
CCDC6-202ENST00000491922 ZBED9Q6R2W3 1325 aa8.76□□□□□ -1.01
CCDC6-202ENST00000491922 RTN4Q9NQC3 1192 aaKnown RBP8.75□□□□□ -1.01
CCDC6-202ENST00000491922 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.75□□□□□ -1.01
CCDC6-202ENST00000491922 NCAPD3P42695 1498 aa8.75□□□□□ -1.01
CCDC6-202ENST00000491922 WASHC2CQ9Y4E1 1318 aa8.74□□□□□ -1.01
CCDC6-202ENST00000491922 LRRC9Q6ZRR7 1453 aa8.73□□□□□ -1.01
CCDC6-202ENST00000491922 NCOA2Q15596 1464 aa8.73□□□□□ -1.01
CCDC6-202ENST00000491922 ADRA2BP18089 450 aa8.72□□□□□ -1.01
CCDC6-202ENST00000491922 CFAP43Q8NDM7 1665 aa8.72□□□□□ -1.01
CCDC6-202ENST00000491922 PPP6R1Q9UPN7 881 aa8.72□□□□□ -1.01
CCDC6-202ENST00000491922 CNTLNQ9NXG0 1405 aa8.71□□□□□ -1.01
CCDC6-202ENST00000491922 PHLDB1Q86UU1 1377 aa8.71□□□□□ -1.02
CCDC6-202ENST00000491922 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.71□□□□□ -1.02
CCDC6-202ENST00000491922 PPM1GO15355 546 aaPredicted RBP8.7□□□□□ -1.02
CCDC6-202ENST00000491922 PLEKHG5O94827 1062 aa8.7□□□□□ -1.02
CCDC6-202ENST00000491922 SMG6Q86US8 1419 aaKnown RBP8.7□□□□□ -1.02
CCDC6-202ENST00000491922 NEFMP07197 916 aa8.7□□□□□ -1.02
CCDC6-202ENST00000491922 FAM50AQ14320 339 aaKnown RBP8.69□□□□□ -1.02
CCDC6-202ENST00000491922 RNF123Q5XPI4 1314 aa8.69□□□□□ -1.02
CCDC6-202ENST00000491922 KIF27Q86VH2 1401 aa8.69□□□□□ -1.02
CCDC6-202ENST00000491922 KDM5BQ9UGL1 1544 aa8.68□□□□□ -1.02
CCDC6-202ENST00000491922 UACAQ9BZF9 1416 aa8.67□□□□□ -1.02
CCDC6-202ENST00000491922 CCDC18Q5T9S5 1454 aa8.67□□□□□ -1.02
CCDC6-202ENST00000491922 FAM9BQ8IZU0 186 aa8.67□□□□□ -1.02
CCDC6-202ENST00000491922 MRS2Q9HD23 443 aa8.67□□□□□ -1.02
CCDC6-202ENST00000491922 CCDC184Q52MB2 194 aa8.66□□□□□ -1.02
CCDC6-202ENST00000491922 PRKRIP1Q9H875 184 aaPredicted RBP8.66□□□□□ -1.02
CCDC6-202ENST00000491922 PKNOX2Q96KN3 472 aa8.65□□□□□ -1.02
CCDC6-202ENST00000491922 NUDCQ9Y266 331 aa8.65□□□□□ -1.02
CCDC6-202ENST00000491922 AKNAQ7Z591 1439 aa8.65□□□□□ -1.02
CCDC6-202ENST00000491922 THOC2Q8NI27 1593 aaKnown RBP8.65□□□□□ -1.03
CCDC6-202ENST00000491922 HSPA5P11021 654 aaKnown RBP8.65□□□□□ -1.03
CCDC6-202ENST00000491922 RSPH6AQ9H0K4 717 aa8.65□□□□□ -1.03
CCDC6-202ENST00000491922 TCERG1O14776 1098 aaKnown RBP8.64□□□□□ -1.03
CCDC6-202ENST00000491922 LAS1LQ9Y4W2 734 aaKnown RBP8.64□□□□□ -1.03
CCDC6-202ENST00000491922 POLR1AO95602 1720 aaPredicted RBP8.64□□□□□ -1.03
CCDC6-202ENST00000491922 GSE1Q14687 1217 aa8.64□□□□□ -1.03
CCDC6-202ENST00000491922 ABCA5Q8WWZ7 1642 aa8.64□□□□□ -1.03
CCDC6-202ENST00000491922 PTPN23Q9H3S7 1636 aa8.63□□□□□ -1.03
CCDC6-202ENST00000491922 PODXL2Q9NZ53 605 aa8.63□□□□□ -1.03
CCDC6-202ENST00000491922 BRPF3Q9ULD4 1205 aa8.63□□□□□ -1.03
CCDC6-202ENST00000491922 HFM1A2PYH4 1435 aa8.63□□□□□ -1.03
CCDC6-202ENST00000491922 NCOA1Q15788 1441 aa8.63□□□□□ -1.03
CCDC6-202ENST00000491922 EIF4G2P78344 907 aaKnown RBP eCLIP8.63□□□□□ -1.03
CCDC6-202ENST00000491922 MS4A1P11836 297 aa8.62□□□□□ -1.03
CCDC6-202ENST00000491922 NPM2Q86SE8 214 aaKnown RBP8.62□□□□□ -1.03
CCDC6-202ENST00000491922 CCDC7Q96M83 1385 aa8.62□□□□□ -1.03
CCDC6-202ENST00000491922 PCF11O94913 1555 aaKnown RBP8.61□□□□□ -1.03
CCDC6-202ENST00000491922 DDRGK1Q96HY6 314 aa8.61□□□□□ -1.03
CCDC6-202ENST00000491922 ATAD2BQ9ULI0 1458 aa8.61□□□□□ -1.03
CCDC6-202ENST00000491922 CUX1P39880 1505 aa8.6□□□□□ -1.03
CCDC6-202ENST00000491922 PDE4AP27815 886 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms