RNA–Protein interactions for RNA: ENST00000490456.6

SKAP2-207, Transcript of src kinase associated phosphoprotein 2, humanhuman

TSL 4

Gene SKAP2, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-207ENST00000490456 SOGA1O94964 1423 aa15.89■□□□□ 0.13
SKAP2-207ENST00000490456 TDRD9Q8NDG6 1382 aaKnown RBP15.88■□□□□ 0.13
SKAP2-207ENST00000490456 DSG3P32926 999 aa15.88■□□□□ 0.13
SKAP2-207ENST00000490456 SPINK5Q9NQ38 1064 aaPredicted RBP15.88■□□□□ 0.13
SKAP2-207ENST00000490456 CHMP7Q8WUX9 453 aaPredicted RBP15.87■□□□□ 0.13
SKAP2-207ENST00000490456 SYNJ2O15056 1496 aa15.84■□□□□ 0.13
SKAP2-207ENST00000490456 GAPVD1Q14C86 1478 aa15.84■□□□□ 0.13
SKAP2-207ENST00000490456 GRIN2BQ13224 1484 aa15.84■□□□□ 0.13
SKAP2-207ENST00000490456 SUPT5HO00267 1087 aaKnown RBP15.83■□□□□ 0.12
SKAP2-207ENST00000490456 FGD5Q6ZNL6 1462 aa15.82■□□□□ 0.12
SKAP2-207ENST00000490456 APLP2Q06481 763 aa15.81■□□□□ 0.12
SKAP2-207ENST00000490456 PBRM1Q86U86 1689 aa15.8■□□□□ 0.12
SKAP2-207ENST00000490456 POTEHQ6S545 545 aa15.79■□□□□ 0.12
SKAP2-207ENST00000490456 CUX1P39880 1505 aa15.73■□□□□ 0.11
SKAP2-207ENST00000490456 KIF13AQ9H1H9 1805 aa15.69■□□□□ 0.1
SKAP2-207ENST00000490456 ABCA5Q8WWZ7 1642 aa15.68■□□□□ 0.1
SKAP2-207ENST00000490456 ERCC6L2Q5T890 1561 aa15.66■□□□□ 0.1
SKAP2-207ENST00000490456 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.65■□□□□ 0.1
SKAP2-207ENST00000490456 HNRNPUL2Q1KMD3 747 aaKnown RBP15.65■□□□□ 0.1
SKAP2-207ENST00000490456 ZNF219Q9P2Y4 722 aaPredicted RBP15.65■□□□□ 0.1
SKAP2-207ENST00000490456 KCNA4P22459 653 aa15.64■□□□□ 0.09
SKAP2-207ENST00000490456 CEP170Q5SW79 1584 aa15.64■□□□□ 0.09
SKAP2-207ENST00000490456 ABCA10Q8WWZ4 1543 aa15.63■□□□□ 0.09
SKAP2-207ENST00000490456 GRIN2AQ12879 1464 aa15.63■□□□□ 0.09
SKAP2-207ENST00000490456 SHROOM2Q13796 1616 aa15.62■□□□□ 0.09
SKAP2-207ENST00000490456 ADAMTS12P58397 1594 aa15.59■□□□□ 0.09
SKAP2-207ENST00000490456 NUP160Q12769 1436 aa15.59■□□□□ 0.09
SKAP2-207ENST00000490456 SLC4A2P04920 1241 aa15.58■□□□□ 0.08
SKAP2-207ENST00000490456 ABCB7O75027 752 aa15.53■□□□□ 0.08
SKAP2-207ENST00000490456 SAMD1Q6SPF0 538 aaPredicted RBP15.5■□□□□ 0.07
SKAP2-207ENST00000490456 ABCC10Q5T3U5 1492 aa15.5■□□□□ 0.07
SKAP2-207ENST00000490456 FHAD1B1AJZ9 1412 aa15.5■□□□□ 0.07
SKAP2-207ENST00000490456 MAPKBP1O60336 1514 aa15.48■□□□□ 0.07
SKAP2-207ENST00000490456 KDM6BO15054 1643 aa15.47■□□□□ 0.07
SKAP2-207ENST00000490456 DIP2BQ9P265 1576 aa15.47■□□□□ 0.07
SKAP2-207ENST00000490456 WRNQ14191 1432 aaPredicted RBP eCLIP15.46■□□□□ 0.07
SKAP2-207ENST00000490456 PRG4Q92954 1404 aaPredicted RBP15.45■□□□□ 0.06
SKAP2-207ENST00000490456 ERICH3Q5RHP9 1530 aa15.45■□□□□ 0.06
SKAP2-207ENST00000490456 FAM69CQ0P6D2 419 aa15.45■□□□□ 0.06
SKAP2-207ENST00000490456 ILDR1Q86SU0 546 aaPredicted RBP15.45■□□□□ 0.06
SKAP2-207ENST00000490456 KDM4FA0A1W2PPD8 638 aa15.42■□□□□ 0.06
SKAP2-207ENST00000490456 NPM1P06748 294 aaKnown RBP eCLIP15.42■□□□□ 0.06
SKAP2-207ENST00000490456 BIVM-ERCC5R4GMW8 1640 aa15.42■□□□□ 0.06
SKAP2-207ENST00000490456 TSPOAP1O95153 1857 aa15.4■□□□□ 0.06
SKAP2-207ENST00000490456 TOP2BQ02880 1626 aa15.39■□□□□ 0.05
SKAP2-207ENST00000490456 ADCY10Q96PN6 1610 aa15.39■□□□□ 0.05
SKAP2-207ENST00000490456 RUSC2Q8N2Y8 1516 aa15.38■□□□□ 0.05
SKAP2-207ENST00000490456 JPH4Q96JJ6 628 aa15.38■□□□□ 0.05
SKAP2-207ENST00000490456 RBM42Q9BTD8 480 aaKnown RBP15.34■□□□□ 0.05
SKAP2-207ENST00000490456 ADGRL1O94910 1474 aa15.25■□□□□ 0.03
SKAP2-207ENST00000490456 KIAA0586Q9BVV6 1533 aa15.22■□□□□ 0.03
SKAP2-207ENST00000490456 PPRC1Q5VV67 1664 aaKnown RBP15.22■□□□□ 0.03
SKAP2-207ENST00000490456 HECW2Q9P2P5 1572 aa15.21■□□□□ 0.03
SKAP2-207ENST00000490456 GLI2P10070 1586 aa15.2■□□□□ 0.02
SKAP2-207ENST00000490456 CUL7Q14999 1698 aa15.17■□□□□ 0.02
SKAP2-207ENST00000490456 PLB1Q6P1J6 1458 aa15.17■□□□□ 0.02
SKAP2-207ENST00000490456 MYCNP04198 464 aaPredicted RBP15.17■□□□□ 0.02
SKAP2-207ENST00000490456 ABCC2Q92887 1545 aa15.17■□□□□ 0.02
SKAP2-207ENST00000490456 PTPRGP23470 1445 aa15.15■□□□□ 0.02
SKAP2-207ENST00000490456 ASXL2Q76L83 1435 aa15.14■□□□□ 0.01
SKAP2-207ENST00000490456 MAP3K4Q9Y6R4 1608 aa15.12■□□□□ 0.01
SKAP2-207ENST00000490456 POLA2Q14181 598 aa15.11■□□□□ 0.01
SKAP2-207ENST00000490456 CARMIL2Q6F5E8 1435 aa15.1■□□□□ 0.01
SKAP2-207ENST00000490456 TEX14Q8IWB6 1497 aa15.1■□□□□ 0.01
SKAP2-207ENST00000490456 TNIKQ9UKE5 1360 aa15.1■□□□□ 0.01
SKAP2-207ENST00000490456 UHRF1BP1LA0JNW5 1464 aa15.09■□□□□ 0.01
SKAP2-207ENST00000490456 COL17A1Q9UMD9 1497 aaPredicted RBP15.08■□□□□ 0
SKAP2-207ENST00000490456 EPRSP07814 1512 aaKnown RBP15.06■□□□□ 0
SKAP2-207ENST00000490456 IGF1RP08069 1367 aa15.05■□□□□ -0
SKAP2-207ENST00000490456 IQGAP2Q13576 1575 aa15.04■□□□□ -0
SKAP2-207ENST00000490456 KIF27Q86VH2 1401 aa15.04■□□□□ -0
SKAP2-207ENST00000490456 CHRDL2Q6WN34 429 aa15.04■□□□□ -0
SKAP2-207ENST00000490456 UACAQ9BZF9 1416 aa15.03■□□□□ -0
SKAP2-207ENST00000490456 TTBK1Q5TCY1 1321 aaPredicted RBP15.03■□□□□ -0
SKAP2-207ENST00000490456 KDM5BQ9UGL1 1544 aa15.02■□□□□ -0
SKAP2-207ENST00000490456 ZCCHC11Q5TAX3 1644 aaKnown RBP15.02□□□□□ -0.01
SKAP2-207ENST00000490456 FBXO41Q8TF61 875 aa15.01□□□□□ -0.01
SKAP2-207ENST00000490456 DISP1Q96F81 1524 aa14.96□□□□□ -0.02
SKAP2-207ENST00000490456 CARMIL1Q5VZK9 1371 aa14.96□□□□□ -0.02
SKAP2-207ENST00000490456 CFAP43Q8NDM7 1665 aa14.95□□□□□ -0.02
SKAP2-207ENST00000490456 WDR7Q9Y4E6 1490 aa14.94□□□□□ -0.02
SKAP2-207ENST00000490456 KIF21BO75037 1637 aa14.93□□□□□ -0.02
SKAP2-207ENST00000490456 MAGI3Q5TCQ9 1506 aa14.92□□□□□ -0.02
SKAP2-207ENST00000490456 ZBTB12Q9Y330 459 aaPredicted RBP14.91□□□□□ -0.02
SKAP2-207ENST00000490456 KIAA0556O60303 1618 aa14.91□□□□□ -0.02
SKAP2-207ENST00000490456 UGGT2Q9NYU1 1516 aa14.91□□□□□ -0.02
SKAP2-207ENST00000490456 CD109Q6YHK3 1445 aa14.88□□□□□ -0.03
SKAP2-207ENST00000490456 AKT1S1Q96B36 256 aa14.84□□□□□ -0.03
SKAP2-207ENST00000490456 ADAMTSL3P82987 1691 aa14.84□□□□□ -0.03
SKAP2-207ENST00000490456 PTPRMP28827 1452 aa14.82□□□□□ -0.04
SKAP2-207ENST00000490456 ARAP3Q8WWN8 1544 aa14.82□□□□□ -0.04
SKAP2-207ENST00000490456 SLC4A1APQ9BWU0 796 aaKnown RBP14.8□□□□□ -0.04
SKAP2-207ENST00000490456 FOXD4L1Q9NU39 408 aa14.8□□□□□ -0.04
SKAP2-207ENST00000490456 RAPGEF2Q9Y4G8 1499 aa14.8□□□□□ -0.04
SKAP2-207ENST00000490456 CTTNBP2Q8WZ74 1663 aa14.8□□□□□ -0.04
SKAP2-207ENST00000490456 PCF11O94913 1555 aaKnown RBP14.79□□□□□ -0.04
SKAP2-207ENST00000490456 ABCA8O94911 1581 aa14.78□□□□□ -0.04
SKAP2-207ENST00000490456 KCNH8Q96L42 1107 aa14.77□□□□□ -0.05
SKAP2-207ENST00000490456 BCORL1Q5H9F3 1711 aa14.77□□□□□ -0.05
SKAP2-207ENST00000490456 GOLGA3Q08378 1498 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms