RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 RIMBP3BA6NNM3 1639 aa9.51□□□□□ -0.89
PTPRK-213ENST00000490332 RIMBP3Q9UFD9 1639 aa9.51□□□□□ -0.89
PTPRK-213ENST00000490332 DCAF1Q9Y4B6 1507 aa9.51□□□□□ -0.89
PTPRK-213ENST00000490332 NESP48681 1621 aa9.49□□□□□ -0.89
PTPRK-213ENST00000490332 NCAPD3P42695 1498 aa9.49□□□□□ -0.89
PTPRK-213ENST00000490332 CLCN6P51797 869 aa9.49□□□□□ -0.89
PTPRK-213ENST00000490332 SMARCA2P51531 1590 aa9.47□□□□□ -0.89
PTPRK-213ENST00000490332 PLSCR2Q9NRY7 297 aa9.45□□□□□ -0.9
PTPRK-213ENST00000490332 ZNF579Q8NAF0 562 aaKnown RBP9.44□□□□□ -0.9
PTPRK-213ENST00000490332 DCBLD2Q96PD2 775 aa9.44□□□□□ -0.9
PTPRK-213ENST00000490332 LAMC3Q9Y6N6 1575 aa9.43□□□□□ -0.9
PTPRK-213ENST00000490332 KIF21AQ7Z4S6 1674 aa9.41□□□□□ -0.9
PTPRK-213ENST00000490332 ARHGEF11O15085 1522 aa9.41□□□□□ -0.9
PTPRK-213ENST00000490332 PDS5BQ9NTI5 1447 aa9.4□□□□□ -0.9
PTPRK-213ENST00000490332 ZRANB1Q9UGI0 708 aa9.39□□□□□ -0.91
PTPRK-213ENST00000490332 HMGXB3Q12766 1538 aa9.38□□□□□ -0.91
PTPRK-213ENST00000490332 GALR2O43603 387 aaPredicted RBP9.37□□□□□ -0.91
PTPRK-213ENST00000490332 OTUD5Q96G74 571 aa9.37□□□□□ -0.91
PTPRK-213ENST00000490332 CREBZFQ9NS37 354 aa9.37□□□□□ -0.91
PTPRK-213ENST00000490332 POTEB2H3BUK9 544 aa9.36□□□□□ -0.91
PTPRK-213ENST00000490332 ZCCHC6Q5VYS8 1495 aaKnown RBP9.35□□□□□ -0.91
PTPRK-213ENST00000490332 WDR62O43379 1518 aa9.35□□□□□ -0.91
PTPRK-213ENST00000490332 CYB5RLQ6IPT4 315 aa9.34□□□□□ -0.91
PTPRK-213ENST00000490332 MRC2Q9UBG0 1479 aa9.34□□□□□ -0.91
PTPRK-213ENST00000490332 ATAD2BQ9ULI0 1458 aa9.33□□□□□ -0.92
PTPRK-213ENST00000490332 PELP1Q8IZL8 1130 aaKnown RBP9.25□□□□□ -0.93
PTPRK-213ENST00000490332 PHF12Q96QT6 1004 aa9.25□□□□□ -0.93
PTPRK-213ENST00000490332 ARAP1Q96P48 1450 aa9.24□□□□□ -0.93
PTPRK-213ENST00000490332 POTEMA6NI47 508 aa9.24□□□□□ -0.93
PTPRK-213ENST00000490332 STAG3Q9UJ98 1225 aa9.24□□□□□ -0.93
PTPRK-213ENST00000490332 BAZ1BQ9UIG0 1483 aaKnown RBP9.21□□□□□ -0.94
PTPRK-213ENST00000490332 MNX1P50219 401 aaPredicted RBP9.2□□□□□ -0.94
PTPRK-213ENST00000490332 POTEGQ6S5H5 508 aa9.2□□□□□ -0.94
PTPRK-213ENST00000490332 POTEJP0CG39 1038 aa9.17□□□□□ -0.94
PTPRK-213ENST00000490332 RSF1Q96T23 1441 aaPredicted RBP9.16□□□□□ -0.94
PTPRK-213ENST00000490332 PAK3O75914 559 aaPredicted RBP9.16□□□□□ -0.94
PTPRK-213ENST00000490332 CADPSQ9ULU8 1353 aa9.15□□□□□ -0.94
PTPRK-213ENST00000490332 CSRNP3Q8WYN3 585 aa9.15□□□□□ -0.94
PTPRK-213ENST00000490332 CEP164Q9UPV0 1460 aa9.15□□□□□ -0.95
PTPRK-213ENST00000490332 ASTLQ6HA08 431 aaPredicted RBP9.14□□□□□ -0.95
PTPRK-213ENST00000490332 SMARCA4P51532 1647 aa9.13□□□□□ -0.95
PTPRK-213ENST00000490332 MS4A3Q96HJ5 214 aa9.12□□□□□ -0.95
PTPRK-213ENST00000490332 METRNQ9UJH8 293 aa9.12□□□□□ -0.95
PTPRK-213ENST00000490332 SPDYE4A6NLX3 237 aa9.11□□□□□ -0.95
PTPRK-213ENST00000490332 ATMINO43313 823 aaPredicted RBP9.11□□□□□ -0.95
PTPRK-213ENST00000490332 LCE2DQ5TA82 110 aaPredicted RBP9.11□□□□□ -0.95
PTPRK-213ENST00000490332 NPM1P06748 294 aaKnown RBP eCLIP9.1□□□□□ -0.95
PTPRK-213ENST00000490332 ERCC6L2Q5T890 1561 aa9.08□□□□□ -0.96
PTPRK-213ENST00000490332 PEG3Q9GZU2 1588 aa9.08□□□□□ -0.96
PTPRK-213ENST00000490332 C7P10643 843 aa9.08□□□□□ -0.96
PTPRK-213ENST00000490332 SLC39A7Q92504 469 aa9.08□□□□□ -0.96
PTPRK-213ENST00000490332 FBXO41Q8TF61 875 aa9.07□□□□□ -0.96
PTPRK-213ENST00000490332 PCDH10Q9P2E7 1040 aa9.07□□□□□ -0.96
PTPRK-213ENST00000490332 LMTK3Q96Q04 1460 aa9.07□□□□□ -0.96
PTPRK-213ENST00000490332 FANCD2Q9BXW9 1451 aa9.04□□□□□ -0.96
PTPRK-213ENST00000490332 SOCS7O14512 581 aa9.03□□□□□ -0.96
PTPRK-213ENST00000490332 CHD1O14646 1710 aa9.02□□□□□ -0.97
PTPRK-213ENST00000490332 ATN1P54259 1190 aaPredicted RBP9.01□□□□□ -0.97
PTPRK-213ENST00000490332 MAMSTRQ6ZN01 415 aa9.01□□□□□ -0.97
PTPRK-213ENST00000490332 IFT140Q96RY7 1462 aa9.01□□□□□ -0.97
PTPRK-213ENST00000490332 KDM4FA0A1W2PPD8 638 aa9□□□□□ -0.97
PTPRK-213ENST00000490332 POTEFA5A3E0 1075 aa9□□□□□ -0.97
PTPRK-213ENST00000490332 URB2Q14146 1524 aaKnown RBP8.99□□□□□ -0.97
PTPRK-213ENST00000490332 FAM163AQ96GL9 167 aaPredicted RBP8.98□□□□□ -0.97
PTPRK-213ENST00000490332 CCDC61Q9Y6R9 512 aa8.98□□□□□ -0.97
PTPRK-213ENST00000490332 ZNF608Q9ULD9 1512 aaPredicted RBP8.98□□□□□ -0.97
PTPRK-213ENST00000490332 TSPYL2Q9H2G4 693 aaPredicted RBP8.97□□□□□ -0.97
PTPRK-213ENST00000490332 TRPC6Q9Y210 931 aa8.96□□□□□ -0.98
PTPRK-213ENST00000490332 KIF12Q96FN5 646 aa8.95□□□□□ -0.98
PTPRK-213ENST00000490332 SCUBE2Q9NQ36 999 aa8.95□□□□□ -0.98
PTPRK-213ENST00000490332 EIF4G3O43432 1585 aaKnown RBP8.95□□□□□ -0.98
PTPRK-213ENST00000490332 BMP2KQ9NSY1 1161 aaPredicted RBP8.94□□□□□ -0.98
PTPRK-213ENST00000490332 HECW2Q9P2P5 1572 aa8.94□□□□□ -0.98
PTPRK-213ENST00000490332 CLASP1Q7Z460 1538 aa8.91□□□□□ -0.98
PTPRK-213ENST00000490332 PROM2Q8N271 834 aa8.9□□□□□ -0.98
PTPRK-213ENST00000490332 KIF13AQ9H1H9 1805 aa8.89□□□□□ -0.99
PTPRK-213ENST00000490332 CFTRP13569 1480 aa8.89□□□□□ -0.99
PTPRK-213ENST00000490332 SYNJ1O43426 1573 aa8.88□□□□□ -0.99
PTPRK-213ENST00000490332 GAPVD1Q14C86 1478 aa8.88□□□□□ -0.99
PTPRK-213ENST00000490332 MAP3K13O43283 966 aa8.87□□□□□ -0.99
PTPRK-213ENST00000490332 COLQQ9Y215 455 aaPredicted RBP8.87□□□□□ -0.99
PTPRK-213ENST00000490332 TIE1P35590 1138 aa8.86□□□□□ -0.99
PTPRK-213ENST00000490332 ILDR2Q71H61 639 aa8.85□□□□□ -0.99
PTPRK-213ENST00000490332 KDM6BO15054 1643 aa8.83□□□□□ -1
PTPRK-213ENST00000490332 DISP3Q9P2K9 1392 aa8.83□□□□□ -1
PTPRK-213ENST00000490332 TTLL13PA6NNM8 815 aa8.82□□□□□ -1
PTPRK-213ENST00000490332 CDAN1Q8IWY9 1227 aa8.82□□□□□ -1
PTPRK-213ENST00000490332 RASEFQ8IZ41 740 aa8.82□□□□□ -1
PTPRK-213ENST00000490332 SYNJ2O15056 1496 aa8.82□□□□□ -1
PTPRK-213ENST00000490332 AQRO60306 1485 aaKnown RBP eCLIP8.81□□□□□ -1
PTPRK-213ENST00000490332 MROH2BQ7Z745 1585 aa8.81□□□□□ -1
PTPRK-213ENST00000490332 ADGRL1O94910 1474 aa8.8□□□□□ -1
PTPRK-213ENST00000490332 PRDM2Q13029 1718 aa8.8□□□□□ -1
PTPRK-213ENST00000490332 ABCC8Q09428 1581 aa8.79□□□□□ -1
PTPRK-213ENST00000490332 TOPBP1Q92547 1522 aa8.78□□□□□ -1
PTPRK-213ENST00000490332 SEC24BO95487 1268 aa8.77□□□□□ -1.01
PTPRK-213ENST00000490332 CHMP7Q8WUX9 453 aaPredicted RBP8.76□□□□□ -1.01
PTPRK-213ENST00000490332 EHMT2Q96KQ7 1210 aa8.76□□□□□ -1.01
PTPRK-213ENST00000490332 TARBP1Q13395 1621 aaKnown RBP8.76□□□□□ -1.01
PTPRK-213ENST00000490332 IER5LQ5T953 404 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms