RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 TBRG4Q969Z0 631 aaKnown RBP eCLIP5□□□□□ -1.613e-18■■■■■ 144.4
PTPRK-213ENST00000490332 PPIGQ13427 754 aaKnown RBP eCLIP5.64□□□□□ -1.513e-12■□□□□ 10.3
PTPRK-213ENST00000490332 PCBP2Q15366 365 aaKnown RBP eCLIP4.96□□□□□ -1.625e-10■■■■■ 52.4
PTPRK-213ENST00000490332 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.31□□□□□ -1.081e-9■■□□□ 13.6
PTPRK-213ENST00000490332 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.5□□□□□ -1.696e-9■■■□□ 16.5
PTPRK-213ENST00000490332 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.64□□□□□ -1.676e-9■□□□□ 9.6
PTPRK-213ENST00000490332 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.55□□□□□ -1.521e-8■■■□□ 16
PTPRK-213ENST00000490332 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.51□□□□□ -0.576e-8■□□□□ 10.5
PTPRK-213ENST00000490332 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.24□□□□□ -1.577e-8■■■□□ 17.1
PTPRK-213ENST00000490332 QKIQ96PU8 341 aaKnown RBP eCLIP5.17□□□□□ -1.582e-7■■□□□ 14.4
PTPRK-213ENST00000490332 FXR2P51116 673 aaKnown RBP eCLIP10.22□□□□□ -0.773e-7■□□□□ 8.5
PTPRK-213ENST00000490332 CSTF2P33240 577 aaKnown RBP eCLIP4.74□□□□□ -1.654e-7■■■■■ 36.8
PTPRK-213ENST00000490332 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.15□□□□□ -1.594e-7■■■■■ 29
PTPRK-213ENST00000490332 EIF3HO15372 352 aaKnown RBP eCLIP5.37□□□□□ -1.555e-7■□□□□ 8.5
PTPRK-213ENST00000490332 PRPF4O43172 522 aaKnown RBP eCLIP5.25□□□□□ -1.576e-7■□□□□ 9.8
PTPRK-213ENST00000490332 HNRNPMP52272 730 aaKnown RBP eCLIP7.28□□□□□ -1.241e-6■■■■□ 19.5
PTPRK-213ENST00000490332 U2AF2P26368 475 aaKnown RBP eCLIP5.78□□□□□ -1.481e-6■■■□□ 16.7
PTPRK-213ENST00000490332 MATR3P43243 847 aaKnown RBP eCLIP5.43□□□□□ -1.541e-6■■■■□ 20
PTPRK-213ENST00000490332 HNRNPKP61978 463 aaKnown RBP eCLIP4.59□□□□□ -1.671e-6■■□□□ 13.6
PTPRK-213ENST00000490332 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.33□□□□□ -1.41e-6■■■□□ 19
PTPRK-213ENST00000490332 PTBP1P26599 531 aaKnown RBP eCLIP4.7□□□□□ -1.661e-6■■□□□ 11.5
PTPRK-213ENST00000490332 KHSRPQ92945 711 aaKnown RBP eCLIP7.96□□□□□ -1.142e-6■■□□□ 11.7
PTPRK-213ENST00000490332 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6□□□□□ -1.452e-6■□□□□ 8.1
PTPRK-213ENST00000490332 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.43□□□□□ -1.73e-6■■■■■ 36.9
PTPRK-213ENST00000490332 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.78□□□□□ -1.643e-6■■■■■ 29.3
PTPRK-213ENST00000490332 HNRNPLP14866 589 aaKnown RBP eCLIP4.99□□□□□ -1.619e-6■□□□□ 8.9
PTPRK-213ENST00000490332 RBFOX2O43251 390 aaKnown RBP eCLIP4.2□□□□□ -1.749e-6■■□□□ 11.6
Retrieved 27 of 27 RNA–protein pairs in 31.8 ms