RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 CREBZFQ9NS37 354 aa10.75□□□□□ -0.69
SRRM1-215ENST00000488317 FAM212AQ96EL1 285 aa10.73□□□□□ -0.69
SRRM1-215ENST00000488317 TAOK2Q9UL54 1235 aa10.71□□□□□ -0.69
SRRM1-215ENST00000488317 KDM2AQ9Y2K7 1162 aa10.71□□□□□ -0.69
SRRM1-215ENST00000488317 HS6ST3Q8IZP7 471 aa10.7□□□□□ -0.7
SRRM1-215ENST00000488317 RNF25Q96BH1 459 aaPredicted RBP10.69□□□□□ -0.7
SRRM1-215ENST00000488317 TSHZ2Q9NRE2 1034 aa10.69□□□□□ -0.7
SRRM1-215ENST00000488317 RIOK3O14730 519 aaKnown RBP10.68□□□□□ -0.7
SRRM1-215ENST00000488317 MNX1P50219 401 aaPredicted RBP10.67□□□□□ -0.7
SRRM1-215ENST00000488317 PITPNM1O00562 1244 aa10.65□□□□□ -0.7
SRRM1-215ENST00000488317 RASEFQ8IZ41 740 aa10.64□□□□□ -0.71
SRRM1-215ENST00000488317 STK25O00506 426 aa10.6□□□□□ -0.71
SRRM1-215ENST00000488317 VGFO15240 615 aaPredicted RBP10.6□□□□□ -0.71
SRRM1-215ENST00000488317 CHRM1P11229 460 aaPredicted RBP10.59□□□□□ -0.71
SRRM1-215ENST00000488317 PYGBP11216 843 aa10.57□□□□□ -0.72
SRRM1-215ENST00000488317 DNAJC5Q9H3Z4 198 aa10.57□□□□□ -0.72
SRRM1-215ENST00000488317 NKX1-1Q15270 411 aaPredicted RBP10.54□□□□□ -0.72
SRRM1-215ENST00000488317 CHADLQ6NUI6 762 aa10.53□□□□□ -0.72
SRRM1-215ENST00000488317 STK24Q9Y6E0 443 aa10.53□□□□□ -0.72
SRRM1-215ENST00000488317 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.51□□□□□ -0.73
SRRM1-215ENST00000488317 PRKCSHP14314 528 aaPredicted RBP10.51□□□□□ -0.73
SRRM1-215ENST00000488317 ZFP91Q96JP5 570 aaPredicted RBP10.51□□□□□ -0.73
SRRM1-215ENST00000488317 BCL11BQ9C0K0 894 aaPredicted RBP10.51□□□□□ -0.73
SRRM1-215ENST00000488317 TSPYL2Q9H2G4 693 aaPredicted RBP10.5□□□□□ -0.73
SRRM1-215ENST00000488317 GTPBP6O43824 516 aaPredicted RBP10.49□□□□□ -0.73
SRRM1-215ENST00000488317 SGIP1Q9BQI5 828 aa10.49□□□□□ -0.73
SRRM1-215ENST00000488317 FARP1Q9Y4F1 1045 aaPredicted RBP10.46□□□□□ -0.73
SRRM1-215ENST00000488317 RYDENQ9NUL5 291 aaKnown RBP10.45□□□□□ -0.74
SRRM1-215ENST00000488317 NBR1Q14596 966 aa10.44□□□□□ -0.74
SRRM1-215ENST00000488317 TPRNQ4KMQ1 711 aa10.44□□□□□ -0.74
SRRM1-215ENST00000488317 PRKAR2AP13861 404 aaKnown RBP10.42□□□□□ -0.74
SRRM1-215ENST00000488317 ZNF467Q7Z7K2 595 aaPredicted RBP10.42□□□□□ -0.74
SRRM1-215ENST00000488317 PDAP1Q13442 181 aaKnown RBP10.37□□□□□ -0.75
SRRM1-215ENST00000488317 PCDHB8Q9UN66 801 aa10.36□□□□□ -0.75
SRRM1-215ENST00000488317 PCDHB13Q9Y5F0 798 aa10.36□□□□□ -0.75
SRRM1-215ENST00000488317 PAK3O75914 559 aaPredicted RBP10.35□□□□□ -0.75
SRRM1-215ENST00000488317 FXR2P51116 673 aaKnown RBP eCLIP10.32□□□□□ -0.76
SRRM1-215ENST00000488317 CCDC61Q9Y6R9 512 aa10.32□□□□□ -0.76
SRRM1-215ENST00000488317 PSEN1P49768 467 aa10.31□□□□□ -0.76
SRRM1-215ENST00000488317 ZNF579Q8NAF0 562 aaKnown RBP10.3□□□□□ -0.76
SRRM1-215ENST00000488317 CHRDL2Q6WN34 429 aa10.26□□□□□ -0.77
SRRM1-215ENST00000488317 PIP4P2Q8N4L2 257 aa10.24□□□□□ -0.77
SRRM1-215ENST00000488317 WDR70Q9NW82 654 aa10.24□□□□□ -0.77
SRRM1-215ENST00000488317 IFNL1Q8IU54 200 aa10.23□□□□□ -0.77
SRRM1-215ENST00000488317 MAP3K13O43283 966 aa10.22□□□□□ -0.77
SRRM1-215ENST00000488317 P3H3Q8IVL6 736 aa10.2□□□□□ -0.78
SRRM1-215ENST00000488317 KIF12Q96FN5 646 aa10.2□□□□□ -0.78
SRRM1-215ENST00000488317 MFRPQ9BY79 579 aa10.2□□□□□ -0.78
SRRM1-215ENST00000488317 CABP2Q9NPB3 220 aa10.19□□□□□ -0.78
SRRM1-215ENST00000488317 ZRANB1Q9UGI0 708 aa10.19□□□□□ -0.78
SRRM1-215ENST00000488317 CADPS2Q86UW7 1296 aa10.18□□□□□ -0.78
SRRM1-215ENST00000488317 EFCAB3Q8N7B9 438 aa10.17□□□□□ -0.78
SRRM1-215ENST00000488317 NLRP6P59044 892 aa10.16□□□□□ -0.78
SRRM1-215ENST00000488317 SOX12O15370 315 aa10.15□□□□□ -0.78
SRRM1-215ENST00000488317 CD44P16070 742 aaKnown RBP10.15□□□□□ -0.78
SRRM1-215ENST00000488317 PHF8Q9UPP1 1060 aa10.13□□□□□ -0.79
SRRM1-215ENST00000488317 PPP1R37O75864 691 aa10.12□□□□□ -0.79
SRRM1-215ENST00000488317 PHF12Q96QT6 1004 aa10.12□□□□□ -0.79
SRRM1-215ENST00000488317 FBXO22Q8NEZ5 403 aa10.1□□□□□ -0.79
SRRM1-215ENST00000488317 KCNV2Q8TDN2 545 aa10.1□□□□□ -0.79
SRRM1-215ENST00000488317 GOLGA2Q08379 1002 aa10.09□□□□□ -0.79
SRRM1-215ENST00000488317 TMEM106CQ9BVX2 250 aa10.05□□□□□ -0.8
SRRM1-215ENST00000488317 E2F4Q16254 413 aa10.02□□□□□ -0.81
SRRM1-215ENST00000488317 TULP1O00294 542 aaPredicted RBP10.01□□□□□ -0.81
SRRM1-215ENST00000488317 MKRN3Q13064 507 aaKnown RBP10.01□□□□□ -0.81
SRRM1-215ENST00000488317 PDE4AP27815 886 aa9.99□□□□□ -0.81
SRRM1-215ENST00000488317 ARHGEF1Q92888 912 aaKnown RBP9.99□□□□□ -0.81
SRRM1-215ENST00000488317 MS4A3Q96HJ5 214 aa9.99□□□□□ -0.81
SRRM1-215ENST00000488317 LMOD2Q6P5Q4 547 aa9.98□□□□□ -0.81
SRRM1-215ENST00000488317 MS4A4AQ96JQ5 239 aa9.98□□□□□ -0.81
SRRM1-215ENST00000488317 LARP6Q9BRS8 491 aaKnown RBP9.98□□□□□ -0.81
SRRM1-215ENST00000488317 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.97□□□□□ -0.81
SRRM1-215ENST00000488317 TRPC6Q9Y210 931 aa9.97□□□□□ -0.81
SRRM1-215ENST00000488317 C19orf67A6NJJ6 358 aa9.96□□□□□ -0.82
SRRM1-215ENST00000488317 NCKAP5LQ9HCH0 1330 aa9.94□□□□□ -0.82
SRRM1-215ENST00000488317 TIE1P35590 1138 aa9.91□□□□□ -0.82
SRRM1-215ENST00000488317 DDX27Q96GQ7 796 aaKnown RBP9.91□□□□□ -0.82
SRRM1-215ENST00000488317 SEMA3EO15041 775 aa9.9□□□□□ -0.82
SRRM1-215ENST00000488317 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.9□□□□□ -0.824e-8■■■□□ 15.3
SRRM1-215ENST00000488317 TTLL13PA6NNM8 815 aa9.89□□□□□ -0.83
SRRM1-215ENST00000488317 CRISPLD2Q9H0B8 497 aa9.89□□□□□ -0.83
SRRM1-215ENST00000488317 MFSD10Q14728 455 aa9.88□□□□□ -0.83
SRRM1-215ENST00000488317 TESPA1A2RU30 521 aaPredicted RBP9.86□□□□□ -0.83
SRRM1-215ENST00000488317 SMYD5Q6GMV2 418 aa9.86□□□□□ -0.83
SRRM1-215ENST00000488317 BMP2KQ9NSY1 1161 aaPredicted RBP9.86□□□□□ -0.83
SRRM1-215ENST00000488317 TRIM35Q9UPQ4 493 aa9.84□□□□□ -0.83
SRRM1-215ENST00000488317 HAX1O00165 279 aa9.83□□□□□ -0.84
SRRM1-215ENST00000488317 GALR2O43603 387 aaPredicted RBP9.82□□□□□ -0.84
SRRM1-215ENST00000488317 ZC3H15Q8WU90 426 aaKnown RBP9.82□□□□□ -0.84
SRRM1-215ENST00000488317 CAMK2BQ13554 666 aa9.8□□□□□ -0.84
SRRM1-215ENST00000488317 PPP1R15BQ5SWA1 713 aa9.8□□□□□ -0.84
SRRM1-215ENST00000488317 DPY19L2Q6NUT2 758 aa9.79□□□□□ -0.84
SRRM1-215ENST00000488317 ILDR1Q86SU0 546 aaPredicted RBP9.79□□□□□ -0.84
SRRM1-215ENST00000488317 GPHNQ9NQX3 736 aaPredicted RBP9.79□□□□□ -0.84
SRRM1-215ENST00000488317 ARIH1Q9Y4X5 557 aaPredicted RBP9.79□□□□□ -0.84
SRRM1-215ENST00000488317 CLCN6P51797 869 aa9.77□□□□□ -0.85
SRRM1-215ENST00000488317 TMEM132AQ24JP5 1023 aa9.76□□□□□ -0.85
SRRM1-215ENST00000488317 TMC2Q8TDI7 906 aa9.76□□□□□ -0.85
SRRM1-215ENST00000488317 G3V3G9 751 aa9.75□□□□□ -0.85
SRRM1-215ENST00000488317 GTF3C3Q9Y5Q9 886 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms