RNA–Protein interactions for RNA: ENST00000487159.5

TRAK1-209, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRAK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-209ENST00000487159 MSNP26038 577 aaKnown RBP23.13■■□□□ 1.29
TRAK1-209ENST00000487159 TNNT3P45378 269 aaPredicted RBP23.13■■□□□ 1.29
TRAK1-209ENST00000487159 MYH16Q9H6N6 1097 aa23.12■■□□□ 1.29
TRAK1-209ENST00000487159 PLCB2Q00722 1185 aa23.1■■□□□ 1.29
TRAK1-209ENST00000487159 WDR43Q15061 677 aaKnown RBP eCLIP23.08■■□□□ 1.28
TRAK1-209ENST00000487159 CSRNP3Q8WYN3 585 aa23.04■■□□□ 1.28
TRAK1-209ENST00000487159 PNNQ9H307 717 aaKnown RBP23.03■■□□□ 1.28
TRAK1-209ENST00000487159 GOLGA6L6A8MZA4 724 aa23.01■■□□□ 1.27
TRAK1-209ENST00000487159 SUPT16HQ9Y5B9 1047 aaKnown RBP23■■□□□ 1.27
TRAK1-209ENST00000487159 TPRNQ4KMQ1 711 aa23■■□□□ 1.27
TRAK1-209ENST00000487159 NRDCO43847 1150 aa22.99■■□□□ 1.27
TRAK1-209ENST00000487159 PPP4R2Q9NY27 417 aa22.99■■□□□ 1.27
TRAK1-209ENST00000487159 ARID3CA6NKF2 412 aa22.96■■□□□ 1.27
TRAK1-209ENST00000487159 ARID3AQ99856 593 aa22.96■■□□□ 1.27
TRAK1-209ENST00000487159 PLPPR3Q6T4P5 718 aa22.95■■□□□ 1.26
TRAK1-209ENST00000487159 VSIG10Q8N0Z9 540 aa22.92■■□□□ 1.26
TRAK1-209ENST00000487159 RBM19Q9Y4C8 960 aaKnown RBP22.92■■□□□ 1.26
TRAK1-209ENST00000487159 HSP90AA2PQ14568 343 aaPredicted RBP22.87■■□□□ 1.25
TRAK1-209ENST00000487159 DCAF1Q9Y4B6 1507 aa22.85■■□□□ 1.25
TRAK1-209ENST00000487159 CASC1Q6TDU7 716 aa22.85■■□□□ 1.25
TRAK1-209ENST00000487159 HSP90AB1P08238 724 aaKnown RBP22.84■■□□□ 1.25
TRAK1-209ENST00000487159 ESF1Q9H501 851 aaKnown RBP22.83■■□□□ 1.25
TRAK1-209ENST00000487159 RGS3P49796 1198 aa22.8■■□□□ 1.24
TRAK1-209ENST00000487159 RSPH6AQ9H0K4 717 aa22.78■■□□□ 1.24
TRAK1-209ENST00000487159 P3H3Q8IVL6 736 aa22.76■■□□□ 1.23
TRAK1-209ENST00000487159 KIAA2012Q0VF49 1180 aa22.75■■□□□ 1.23
TRAK1-209ENST00000487159 HIRIP3Q9BW71 556 aaPredicted RBP22.74■■□□□ 1.23
TRAK1-209ENST00000487159 B4GALNT3Q6L9W6 998 aa22.74■■□□□ 1.23
TRAK1-209ENST00000487159 DRC7Q8IY82 874 aa22.72■■□□□ 1.23
TRAK1-209ENST00000487159 ZBTB7CA1YPR0 619 aa22.71■■□□□ 1.23
TRAK1-209ENST00000487159 HSCBQ8IWL3 235 aa22.71■■□□□ 1.23
TRAK1-209ENST00000487159 NPM1P06748 294 aaKnown RBP eCLIP22.71■■□□□ 1.23
TRAK1-209ENST00000487159 ZNF777Q9ULD5 760 aaPredicted RBP22.7■■□□□ 1.22
TRAK1-209ENST00000487159 GOLGA6L4A6NEF3 574 aa22.66■■□□□ 1.22
TRAK1-209ENST00000487159 EIF4G2P78344 907 aaKnown RBP eCLIP22.65■■□□□ 1.222e-12■■■■■ 44.7
TRAK1-209ENST00000487159 CALRP27797 417 aaKnown RBP22.65■■□□□ 1.22
TRAK1-209ENST00000487159 FTSJ3Q8IY81 847 aaKnown RBP22.63■■□□□ 1.21
TRAK1-209ENST00000487159 GOLGA6L3A6NEY3 463 aa22.6■■□□□ 1.21
TRAK1-209ENST00000487159 GZF1Q9H116 711 aaPredicted RBP22.6■■□□□ 1.21
TRAK1-209ENST00000487159 PTMSP20962 102 aa22.59■■□□□ 1.21
TRAK1-209ENST00000487159 SENP3-EIF4A1A0A087X0R7 540 aa22.58■■□□□ 1.21
TRAK1-209ENST00000487159 SPRYD3Q8NCJ5 442 aa22.58■■□□□ 1.2
TRAK1-209ENST00000487159 CHGAP10645 457 aaKnown RBP22.57■■□□□ 1.2
TRAK1-209ENST00000487159 STAG3Q9UJ98 1225 aa22.57■■□□□ 1.2
TRAK1-209ENST00000487159 TSHZ2Q9NRE2 1034 aa22.56■■□□□ 1.2
TRAK1-209ENST00000487159 GBP4Q96PP9 640 aa22.56■■□□□ 1.2
TRAK1-209ENST00000487159 GOLGA6L1Q8N7Z2 621 aa22.55■■□□□ 1.2
TRAK1-209ENST00000487159 TULP1O00294 542 aaPredicted RBP22.55■■□□□ 1.2
TRAK1-209ENST00000487159 SETQ01105 290 aaPredicted RBP22.52■■□□□ 1.2
TRAK1-209ENST00000487159 NOC3LQ8WTT2 800 aaKnown RBP22.5■■□□□ 1.19
TRAK1-209ENST00000487159 KDM2AQ9Y2K7 1162 aa22.48■■□□□ 1.19
TRAK1-209ENST00000487159 A0A0U1RQG5 324 aaPredicted RBP22.48■■□□□ 1.19
TRAK1-209ENST00000487159 FGD1P98174 961 aa22.47■■□□□ 1.19
TRAK1-209ENST00000487159 IPO9Q96P70 1041 aaKnown RBP22.45■■□□□ 1.18
TRAK1-209ENST00000487159 PKNOX2Q96KN3 472 aa22.44■■□□□ 1.18
TRAK1-209ENST00000487159 SLKQ9H2G2 1235 aaPredicted RBP22.44■■□□□ 1.18
TRAK1-209ENST00000487159 FRAT1Q92837 279 aaPredicted RBP22.43■■□□□ 1.18
TRAK1-209ENST00000487159 TAOK2Q9UL54 1235 aa22.43■■□□□ 1.18
TRAK1-209ENST00000487159 TIMELESSQ9UNS1 1208 aa22.41■■□□□ 1.18
TRAK1-209ENST00000487159 CHMP4BQ9H444 224 aaKnown RBP22.41■■□□□ 1.18
TRAK1-209ENST00000487159 ZNF771Q7L3S4 317 aaPredicted RBP22.41■■□□□ 1.18
TRAK1-209ENST00000487159 SYAP1Q96A49 352 aaPredicted RBP22.4■■□□□ 1.18
TRAK1-209ENST00000487159 KCNJ4P48050 445 aa22.39■■□□□ 1.17
TRAK1-209ENST00000487159 USP35Q9P2H5 1018 aa22.38■■□□□ 1.17
TRAK1-209ENST00000487159 PODXL2Q9NZ53 605 aa22.38■■□□□ 1.17
TRAK1-209ENST00000487159 MS4A1P11836 297 aa22.38■■□□□ 1.17
TRAK1-209ENST00000487159 CHIC2Q9UKJ5 165 aa22.37■■□□□ 1.17
TRAK1-209ENST00000487159 CFAP53Q96M91 514 aa22.37■■□□□ 1.17
TRAK1-209ENST00000487159 NAP1L2Q9ULW6 460 aaPredicted RBP22.35■■□□□ 1.17
TRAK1-209ENST00000487159 MCCP23508 829 aa22.35■■□□□ 1.17
TRAK1-209ENST00000487159 APPP05067 770 aa22.34■■□□□ 1.17
TRAK1-209ENST00000487159 TCERG1O14776 1098 aaKnown RBP22.33■■□□□ 1.17
TRAK1-209ENST00000487159 CFAP44Q96MT7 982 aa22.31■■□□□ 1.16
TRAK1-209ENST00000487159 NEUROD2Q15784 382 aa22.3■■□□□ 1.16
TRAK1-209ENST00000487159 GSE1Q14687 1217 aa22.28■■□□□ 1.16
TRAK1-209ENST00000487159 CALD1Q05682 793 aaKnown RBP22.27■■□□□ 1.16
TRAK1-209ENST00000487159 KNSTRNQ9Y448 316 aa22.27■■□□□ 1.16
TRAK1-209ENST00000487159 PRKCSHP14314 528 aaPredicted RBP22.26■■□□□ 1.15
TRAK1-209ENST00000487159 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.25■■□□□ 1.153e-7■■□□□ 13.5
TRAK1-209ENST00000487159 SCRIBQ14160 1630 aa22.24■■□□□ 1.15
TRAK1-209ENST00000487159 CHMP7Q8WUX9 453 aaPredicted RBP22.24■■□□□ 1.15
TRAK1-209ENST00000487159 TPM4P67936 248 aa22.23■■□□□ 1.15
TRAK1-209ENST00000487159 FAM13BQ9NYF5 915 aa22.23■■□□□ 1.15
TRAK1-209ENST00000487159 OS9Q13438 667 aaPredicted RBP22.21■■□□□ 1.15
TRAK1-209ENST00000487159 HTATSF1O43719 755 aaKnown RBP22.21■■□□□ 1.15
TRAK1-209ENST00000487159 MAPK8IP3Q9UPT6 1336 aa22.21■■□□□ 1.15
TRAK1-209ENST00000487159 CCER2I3L3R5 266 aa22.17■■□□□ 1.14
TRAK1-209ENST00000487159 GPS2Q13227 327 aa22.17■■□□□ 1.14
TRAK1-209ENST00000487159 A0A0G2JS52 829 aa22.17■■□□□ 1.14
TRAK1-209ENST00000487159 CDCA8Q53HL2 280 aa22.16■■□□□ 1.14
TRAK1-209ENST00000487159 TEX35Q5T0J7 233 aa22.14■■□□□ 1.13
TRAK1-209ENST00000487159 GNL2Q13823 731 aaKnown RBP22.13■■□□□ 1.13
TRAK1-209ENST00000487159 DDX11L8A8MPP1 907 aa22.13■■□□□ 1.13
TRAK1-209ENST00000487159 PHF14O94880 888 aa22.13■■□□□ 1.13
TRAK1-209ENST00000487159 NCBP3Q53F19 620 aaKnown RBP22.11■■□□□ 1.13
TRAK1-209ENST00000487159 NUDCQ9Y266 331 aa22.11■■□□□ 1.13
TRAK1-209ENST00000487159 PLEKHG5O94827 1062 aa22.1■■□□□ 1.13
TRAK1-209ENST00000487159 PATL2C9JE40 543 aaKnown RBP22.1■■□□□ 1.13
TRAK1-209ENST00000487159 CLSTN1O94985 981 aa22.1■■□□□ 1.13
TRAK1-209ENST00000487159 TPM3P06753 285 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms