RNA–Protein interactions for RNA: ENST00000484751.1

TMEM248-206, Transcript of transmembrane protein 248, humanhuman

TSL 2

Gene TMEM248, Length 739 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-206ENST00000484751 TIAM1Q13009 1591 aa12.66□□□□□ -0.38
TMEM248-206ENST00000484751 KANK4Q5T7N3 995 aaPredicted RBP12.65□□□□□ -0.38
TMEM248-206ENST00000484751 TOPBP1Q92547 1522 aa12.65□□□□□ -0.38
TMEM248-206ENST00000484751 DHX57Q6P158 1386 aaKnown RBP12.65□□□□□ -0.38
TMEM248-206ENST00000484751 AQRO60306 1485 aaKnown RBP eCLIP12.64□□□□□ -0.391e-6■□□□□ 10.1
TMEM248-206ENST00000484751 SCAF1Q9H7N4 1312 aaKnown RBP12.62□□□□□ -0.39
TMEM248-206ENST00000484751 POLA1P09884 1462 aaPredicted RBP12.62□□□□□ -0.39
TMEM248-206ENST00000484751 PDS5BQ9NTI5 1447 aa12.62□□□□□ -0.39
TMEM248-206ENST00000484751 LRRC9Q6ZRR7 1453 aa12.61□□□□□ -0.39
TMEM248-206ENST00000484751 FYCO1Q9BQS8 1478 aa12.61□□□□□ -0.39
TMEM248-206ENST00000484751 CFAP43Q8NDM7 1665 aa12.59□□□□□ -0.39
TMEM248-206ENST00000484751 FMN1Q68DA7 1419 aa12.59□□□□□ -0.39
TMEM248-206ENST00000484751 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.58□□□□□ -0.4
TMEM248-206ENST00000484751 CASKIN1Q8WXD9 1431 aa12.58□□□□□ -0.4
TMEM248-206ENST00000484751 RAD54L2Q9Y4B4 1467 aa12.55□□□□□ -0.4
TMEM248-206ENST00000484751 SETD5Q9C0A6 1442 aa12.54□□□□□ -0.4
TMEM248-206ENST00000484751 NEUROD1Q13562 356 aa12.54□□□□□ -0.4
TMEM248-206ENST00000484751 PCF11O94913 1555 aaKnown RBP12.54□□□□□ -0.4
TMEM248-206ENST00000484751 CTTNBP2Q8WZ74 1663 aa12.54□□□□□ -0.4
TMEM248-206ENST00000484751 TIMELESSQ9UNS1 1208 aa12.52□□□□□ -0.41
TMEM248-206ENST00000484751 WDR97A6NE52 1622 aa12.51□□□□□ -0.41
TMEM248-206ENST00000484751 RAB3GAP2Q9H2M9 1393 aa12.51□□□□□ -0.41
TMEM248-206ENST00000484751 URB2Q14146 1524 aaKnown RBP12.51□□□□□ -0.41
TMEM248-206ENST00000484751 THOC2Q8NI27 1593 aaKnown RBP12.51□□□□□ -0.41
TMEM248-206ENST00000484751 GAPVD1Q14C86 1478 aa12.5□□□□□ -0.41
TMEM248-206ENST00000484751 NESP48681 1621 aa12.5□□□□□ -0.41
TMEM248-206ENST00000484751 ABCA5Q8WWZ7 1642 aa12.5□□□□□ -0.41
TMEM248-206ENST00000484751 FHOD3Q2V2M9 1422 aa12.49□□□□□ -0.41
TMEM248-206ENST00000484751 PHLDB1Q86UU1 1377 aa12.48□□□□□ -0.41
TMEM248-206ENST00000484751 FAM50AQ14320 339 aaKnown RBP12.47□□□□□ -0.41
TMEM248-206ENST00000484751 KIF21AQ7Z4S6 1674 aa12.46□□□□□ -0.41
TMEM248-206ENST00000484751 ITGAEP38570 1179 aa12.46□□□□□ -0.41
TMEM248-206ENST00000484751 MIER1Q8N108 512 aa12.46□□□□□ -0.41
TMEM248-206ENST00000484751 ATP1B4Q9UN42 357 aaPredicted RBP12.46□□□□□ -0.41
TMEM248-206ENST00000484751 SAMD9Q5K651 1589 aa12.45□□□□□ -0.42
TMEM248-206ENST00000484751 GTF3C3Q9Y5Q9 886 aa12.45□□□□□ -0.42
TMEM248-206ENST00000484751 MTUS2Q5JR59 1369 aa12.44□□□□□ -0.42
TMEM248-206ENST00000484751 SNAPC4Q5SXM2 1469 aa12.43□□□□□ -0.42
TMEM248-206ENST00000484751 CCDC18Q5T9S5 1454 aa12.43□□□□□ -0.42
TMEM248-206ENST00000484751 P3H3Q8IVL6 736 aa12.43□□□□□ -0.42
TMEM248-206ENST00000484751 PIAS4Q8N2W9 510 aaPredicted RBP12.43□□□□□ -0.42
TMEM248-206ENST00000484751 FGD6Q6ZV73 1430 aa12.42□□□□□ -0.42
TMEM248-206ENST00000484751 EHBP1L1Q8N3D4 1523 aa12.42□□□□□ -0.42
TMEM248-206ENST00000484751 MAPKBP1O60336 1514 aa12.41□□□□□ -0.42
TMEM248-206ENST00000484751 TDRD9Q8NDG6 1382 aaKnown RBP12.41□□□□□ -0.42
TMEM248-206ENST00000484751 GRIN2BQ13224 1484 aa12.39□□□□□ -0.43
TMEM248-206ENST00000484751 YTHDC1Q96MU7 727 aaKnown RBP12.38□□□□□ -0.43
TMEM248-206ENST00000484751 MRC2Q9UBG0 1479 aa12.38□□□□□ -0.43
TMEM248-206ENST00000484751 MYOM3Q5VTT5 1437 aa12.37□□□□□ -0.43
TMEM248-206ENST00000484751 TARBP1Q13395 1621 aaKnown RBP12.37□□□□□ -0.43
TMEM248-206ENST00000484751 SUPT6HQ7KZ85 1726 aaKnown RBP12.37□□□□□ -0.43
TMEM248-206ENST00000484751 HECW1Q76N89 1606 aa12.36□□□□□ -0.43
TMEM248-206ENST00000484751 HFM1A2PYH4 1435 aa12.36□□□□□ -0.43
TMEM248-206ENST00000484751 NCOA2Q15596 1464 aa12.34□□□□□ -0.43
TMEM248-206ENST00000484751 IFT140Q96RY7 1462 aa12.34□□□□□ -0.43
TMEM248-206ENST00000484751 UACAQ9BZF9 1416 aa12.33□□□□□ -0.44
TMEM248-206ENST00000484751 ADAMTS12P58397 1594 aa12.33□□□□□ -0.44
TMEM248-206ENST00000484751 IQGAP2Q13576 1575 aa12.33□□□□□ -0.44
TMEM248-206ENST00000484751 AKNAQ7Z591 1439 aa12.32□□□□□ -0.44
TMEM248-206ENST00000484751 PBRM1Q86U86 1689 aa12.31□□□□□ -0.44
TMEM248-206ENST00000484751 UGGT2Q9NYU1 1516 aa12.31□□□□□ -0.44
TMEM248-206ENST00000484751 MIA2Q96PC5 1412 aa12.3□□□□□ -0.44
TMEM248-206ENST00000484751 TONSLQ96HA7 1378 aa12.3□□□□□ -0.44
TMEM248-206ENST00000484751 TCOF1Q13428 1488 aaKnown RBP12.29□□□□□ -0.44
TMEM248-206ENST00000484751 ARHGEF11O15085 1522 aa12.29□□□□□ -0.44
TMEM248-206ENST00000484751 PTPN23Q9H3S7 1636 aa12.28□□□□□ -0.44
TMEM248-206ENST00000484751 PPP1R15AO75807 674 aaPredicted RBP12.26□□□□□ -0.45
TMEM248-206ENST00000484751 EPRSP07814 1512 aaKnown RBP12.26□□□□□ -0.45
TMEM248-206ENST00000484751 NAIPQ13075 1403 aa12.25□□□□□ -0.45
TMEM248-206ENST00000484751 WDR62O43379 1518 aa12.25□□□□□ -0.45
TMEM248-206ENST00000484751 KIAA0586Q9BVV6 1533 aa12.25□□□□□ -0.45
TMEM248-206ENST00000484751 CDK11AQ9UQ88 783 aaPredicted RBP12.24□□□□□ -0.45
TMEM248-206ENST00000484751 SIN3AQ96ST3 1273 aa12.23□□□□□ -0.45
TMEM248-206ENST00000484751 GCC2Q8IWJ2 1684 aa12.2□□□□□ -0.46
TMEM248-206ENST00000484751 CCER2I3L3R5 266 aa12.2□□□□□ -0.46
TMEM248-206ENST00000484751 LRRIQ1Q96JM4 1722 aa12.2□□□□□ -0.46
TMEM248-206ENST00000484751 PTPRKQ15262 1439 aa12.2□□□□□ -0.46
TMEM248-206ENST00000484751 ROCK1Q13464 1354 aa12.19□□□□□ -0.46
TMEM248-206ENST00000484751 MAGI1Q96QZ7 1491 aaPredicted RBP12.19□□□□□ -0.46
TMEM248-206ENST00000484751 ANP32CO43423 234 aa12.18□□□□□ -0.46
TMEM248-206ENST00000484751 KIAA0556O60303 1618 aa12.18□□□□□ -0.46
TMEM248-206ENST00000484751 GRIN2AQ12879 1464 aa12.17□□□□□ -0.46
TMEM248-206ENST00000484751 MAGI3Q5TCQ9 1506 aa12.16□□□□□ -0.46
TMEM248-206ENST00000484751 MYT1Q01538 1121 aa12.15□□□□□ -0.46
TMEM248-206ENST00000484751 CARMIL2Q6F5E8 1435 aa12.14□□□□□ -0.47
TMEM248-206ENST00000484751 DDX10Q13206 875 aaKnown RBP12.14□□□□□ -0.47
TMEM248-206ENST00000484751 ERCC6Q03468 1493 aa12.14□□□□□ -0.47
TMEM248-206ENST00000484751 CDK13Q14004 1512 aaKnown RBP12.13□□□□□ -0.47
TMEM248-206ENST00000484751 RAPGEF6Q8TEU7 1601 aa12.13□□□□□ -0.47
TMEM248-206ENST00000484751 TRIM52Q96A61 297 aa12.13□□□□□ -0.47
TMEM248-206ENST00000484751 DISP1Q96F81 1524 aa12.12□□□□□ -0.47
TMEM248-206ENST00000484751 DNAJC5BQ9UF47 199 aa12.12□□□□□ -0.47
TMEM248-206ENST00000484751 SYNJ2O15056 1496 aa12.12□□□□□ -0.47
TMEM248-206ENST00000484751 EIF4G3O43432 1585 aaKnown RBP12.12□□□□□ -0.47
TMEM248-206ENST00000484751 DAPK1P53355 1430 aa12.11□□□□□ -0.47
TMEM248-206ENST00000484751 ZNF608Q9ULD9 1512 aaPredicted RBP12.11□□□□□ -0.47
TMEM248-206ENST00000484751 RRP7BPQ9NSQ0 103 aa12.11□□□□□ -0.47
TMEM248-206ENST00000484751 TROQ12816 1431 aaPredicted RBP12.11□□□□□ -0.47
TMEM248-206ENST00000484751 NUP153P49790 1475 aaKnown RBP12.1□□□□□ -0.47
TMEM248-206ENST00000484751 DNMT1P26358 1616 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms