RNA–Protein interactions for RNA: ENST00000484298.5

ALMS1-204, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-204ENST00000484298 NOC3LQ8WTT2 800 aaKnown RBP12.45□□□□□ -0.42
ALMS1-204ENST00000484298 KIAA2012Q0VF49 1180 aa12.44□□□□□ -0.42
ALMS1-204ENST00000484298 FBLN2P98095 1184 aa12.43□□□□□ -0.42
ALMS1-204ENST00000484298 WDR43Q15061 677 aaKnown RBP eCLIP12.39□□□□□ -0.43
ALMS1-204ENST00000484298 TONSLQ96HA7 1378 aa12.39□□□□□ -0.43
ALMS1-204ENST00000484298 PLCB2Q00722 1185 aa12.39□□□□□ -0.43
ALMS1-204ENST00000484298 TMC1Q8TDI8 760 aa12.39□□□□□ -0.43
ALMS1-204ENST00000484298 PNNQ9H307 717 aaKnown RBP12.39□□□□□ -0.43
ALMS1-204ENST00000484298 NOP58Q9Y2X3 529 aaKnown RBP12.39□□□□□ -0.43
ALMS1-204ENST00000484298 LOC105371045A0A1W2PR82 267 aa12.37□□□□□ -0.43
ALMS1-204ENST00000484298 A0A0U1RQG5 324 aaPredicted RBP12.37□□□□□ -0.43
ALMS1-204ENST00000484298 ESF1Q9H501 851 aaKnown RBP12.36□□□□□ -0.43
ALMS1-204ENST00000484298 FAM9BQ8IZU0 186 aa12.36□□□□□ -0.43
ALMS1-204ENST00000484298 DRC7Q8IY82 874 aa12.36□□□□□ -0.43
ALMS1-204ENST00000484298 ZBTB7CA1YPR0 619 aa12.36□□□□□ -0.43
ALMS1-204ENST00000484298 GOLGA6L4A6NEF3 574 aa12.35□□□□□ -0.43
ALMS1-204ENST00000484298 SENP3Q9H4L4 574 aaPredicted RBP12.35□□□□□ -0.43
ALMS1-204ENST00000484298 TPRNQ4KMQ1 711 aa12.34□□□□□ -0.43
ALMS1-204ENST00000484298 STAG3Q9UJ98 1225 aa12.33□□□□□ -0.44
ALMS1-204ENST00000484298 ARID4BQ4LE39 1312 aaPredicted RBP12.32□□□□□ -0.44
ALMS1-204ENST00000484298 HSP90AA2PQ14568 343 aaPredicted RBP12.3□□□□□ -0.44
ALMS1-204ENST00000484298 CHGAP10645 457 aaKnown RBP12.29□□□□□ -0.44
ALMS1-204ENST00000484298 HSP90AB1P08238 724 aaKnown RBP12.29□□□□□ -0.44
ALMS1-204ENST00000484298 CHMP4BQ9H444 224 aaKnown RBP12.28□□□□□ -0.44
ALMS1-204ENST00000484298 TAOK2Q9UL54 1235 aa12.28□□□□□ -0.44
ALMS1-204ENST00000484298 RSPH6AQ9H0K4 717 aa12.28□□□□□ -0.44
ALMS1-204ENST00000484298 DEKP35659 375 aaKnown RBP12.27□□□□□ -0.45
ALMS1-204ENST00000484298 APPP05067 770 aa12.27□□□□□ -0.45
ALMS1-204ENST00000484298 SYAP1Q96A49 352 aaPredicted RBP12.26□□□□□ -0.45
ALMS1-204ENST00000484298 LAS1LQ9Y4W2 734 aaKnown RBP12.26□□□□□ -0.45
ALMS1-204ENST00000484298 HSCBQ8IWL3 235 aa12.26□□□□□ -0.45
ALMS1-204ENST00000484298 MRS2Q9HD23 443 aa12.26□□□□□ -0.45
ALMS1-204ENST00000484298 CFAP44Q96MT7 982 aa12.25□□□□□ -0.45
ALMS1-204ENST00000484298 GOLGA6L3A6NEY3 463 aa12.25□□□□□ -0.45
ALMS1-204ENST00000484298 SALL2Q9Y467 1007 aaPredicted RBP12.25□□□□□ -0.45
ALMS1-204ENST00000484298 FGD1P98174 961 aa12.25□□□□□ -0.45
ALMS1-204ENST00000484298 FTSJ3Q8IY81 847 aaKnown RBP12.24□□□□□ -0.45
ALMS1-204ENST00000484298 ZNF777Q9ULD5 760 aaPredicted RBP12.24□□□□□ -0.45
ALMS1-204ENST00000484298 CLSTN1O94985 981 aa12.23□□□□□ -0.45
ALMS1-204ENST00000484298 C14orf37Q86TY3 774 aa12.21□□□□□ -0.45
ALMS1-204ENST00000484298 GPS2Q13227 327 aa12.21□□□□□ -0.46
ALMS1-204ENST00000484298 NOM1Q5C9Z4 860 aaKnown RBP12.2□□□□□ -0.46
ALMS1-204ENST00000484298 GBP4Q96PP9 640 aa12.2□□□□□ -0.46
ALMS1-204ENST00000484298 TPM4P67936 248 aa12.2□□□□□ -0.46
ALMS1-204ENST00000484298 RRP12Q5JTH9 1297 aaKnown RBP12.19□□□□□ -0.46
ALMS1-204ENST00000484298 MCCP23508 829 aa12.19□□□□□ -0.46
ALMS1-204ENST00000484298 CCDC34Q96HJ3 373 aa12.19□□□□□ -0.46
ALMS1-204ENST00000484298 HTATSF1O43719 755 aaKnown RBP12.19□□□□□ -0.46
ALMS1-204ENST00000484298 ARID3AQ99856 593 aa12.18□□□□□ -0.46
ALMS1-204ENST00000484298 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.17□□□□□ -0.46
ALMS1-204ENST00000484298 PRM3Q9NNZ6 103 aa12.17□□□□□ -0.46
ALMS1-204ENST00000484298 DDX10Q13206 875 aaKnown RBP12.16□□□□□ -0.46
ALMS1-204ENST00000484298 KCNJ4P48050 445 aa12.16□□□□□ -0.46
ALMS1-204ENST00000484298 MS4A1P11836 297 aa12.15□□□□□ -0.46
ALMS1-204ENST00000484298 PHF14O94880 888 aa12.15□□□□□ -0.46
ALMS1-204ENST00000484298 GNL2Q13823 731 aaKnown RBP12.15□□□□□ -0.46
ALMS1-204ENST00000484298 TEX35Q5T0J7 233 aa12.15□□□□□ -0.47
ALMS1-204ENST00000484298 STK11IPQ8N1F8 1099 aa12.15□□□□□ -0.47
ALMS1-204ENST00000484298 HMMRO75330 724 aa12.14□□□□□ -0.47
ALMS1-204ENST00000484298 IRX6P78412 446 aaPredicted RBP12.13□□□□□ -0.47
ALMS1-204ENST00000484298 CCDC70Q6NSX1 233 aa12.13□□□□□ -0.47
ALMS1-204ENST00000484298 P3H3Q8IVL6 736 aa12.12□□□□□ -0.47
ALMS1-204ENST00000484298 TPM3P06753 285 aa12.11□□□□□ -0.47
ALMS1-204ENST00000484298 VSIG10Q8N0Z9 540 aa12.11□□□□□ -0.47
ALMS1-204ENST00000484298 ZNF771Q7L3S4 317 aaPredicted RBP12.11□□□□□ -0.47
ALMS1-204ENST00000484298 PPP4R2Q9NY27 417 aa12.1□□□□□ -0.47
ALMS1-204ENST00000484298 NPHP1O15259 732 aa12.09□□□□□ -0.47
ALMS1-204ENST00000484298 CEP89Q96ST8 783 aa12.09□□□□□ -0.47
ALMS1-204ENST00000484298 CALD1Q05682 793 aaKnown RBP12.08□□□□□ -0.48
ALMS1-204ENST00000484298 CSPP1Q1MSJ5 1256 aa12.08□□□□□ -0.48
ALMS1-204ENST00000484298 NAP1L2Q9ULW6 460 aaPredicted RBP12.08□□□□□ -0.48
ALMS1-204ENST00000484298 CFAP53Q96M91 514 aa12.08□□□□□ -0.48
ALMS1-204ENST00000484298 HAP1P54257 671 aaPredicted RBP12.07□□□□□ -0.48
ALMS1-204ENST00000484298 HSP90B1P14625 803 aaKnown RBP12.06□□□□□ -0.48
ALMS1-204ENST00000484298 GOLGA2Q08379 1002 aa12.06□□□□□ -0.48
ALMS1-204ENST00000484298 CCDC191Q8NCU4 936 aa12.06□□□□□ -0.48
ALMS1-204ENST00000484298 RGS3P49796 1198 aa12.05□□□□□ -0.48
ALMS1-204ENST00000484298 CWC15Q9P013 229 aaKnown RBP12.05□□□□□ -0.48
ALMS1-204ENST00000484298 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.04□□□□□ -0.484e-7■■□□□ 12.8
ALMS1-204ENST00000484298 OS9Q13438 667 aaPredicted RBP12.04□□□□□ -0.48
ALMS1-204ENST00000484298 PATL2C9JE40 543 aaKnown RBP12.03□□□□□ -0.48
ALMS1-204ENST00000484298 MTERF4Q7Z6M4 381 aaKnown RBP12.03□□□□□ -0.48
ALMS1-204ENST00000484298 DCAF1Q9Y4B6 1507 aa12.03□□□□□ -0.48
ALMS1-204ENST00000484298 CDR1P51861 262 aa12.02□□□□□ -0.49
ALMS1-204ENST00000484298 MAP7D2Q96T17 732 aa12.01□□□□□ -0.49
ALMS1-204ENST00000484298 RDXP35241 583 aaKnown RBP12.01□□□□□ -0.49
ALMS1-204ENST00000484298 DCTN1Q14203 1278 aa12□□□□□ -0.49
ALMS1-204ENST00000484298 ISY1Q9ULR0 285 aaKnown RBP12□□□□□ -0.49
ALMS1-204ENST00000484298 NEFHP12036 1026 aa12□□□□□ -0.49
ALMS1-204ENST00000484298 PDE4CQ08493 712 aa12□□□□□ -0.49
ALMS1-204ENST00000484298 CDCA8Q53HL2 280 aa12□□□□□ -0.49
ALMS1-204ENST00000484298 CCDC66A2RUB6 948 aa11.99□□□□□ -0.49
ALMS1-204ENST00000484298 TSR1Q2NL82 804 aaKnown RBP11.99□□□□□ -0.49
ALMS1-204ENST00000484298 KIAA1211Q6ZU35 1233 aa11.99□□□□□ -0.49
ALMS1-204ENST00000484298 ACBD3Q9H3P7 528 aa11.98□□□□□ -0.49
ALMS1-204ENST00000484298 CCDC180Q9P1Z9 1646 aa11.98□□□□□ -0.49
ALMS1-204ENST00000484298 SENP3-EIF4A1A0A087X0R7 540 aa11.97□□□□□ -0.49
ALMS1-204ENST00000484298 EIF4G2P78344 907 aaKnown RBP eCLIP11.97□□□□□ -0.49
ALMS1-204ENST00000484298 AK7Q96M32 723 aa11.97□□□□□ -0.49
ALMS1-204ENST00000484298 MAPK8IP3Q9UPT6 1336 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms