RNA–Protein interactions for RNA: ENST00000484259.1

FXN-204, Transcript of frataxin, humanhuman

TSL 3

Gene FXN, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-204ENST00000484259 ZRANB1Q9UGI0 708 aa6.13□□□□□ -1.43
FXN-204ENST00000484259 GALR2O43603 387 aaPredicted RBP6.12□□□□□ -1.43
FXN-204ENST00000484259 FAM163AQ96GL9 167 aaPredicted RBP6.11□□□□□ -1.43
FXN-204ENST00000484259 PABPN1Q86U42 306 aaKnown RBP eCLIP6.1□□□□□ -1.43
FXN-204ENST00000484259 TULP1O00294 542 aaPredicted RBP6.09□□□□□ -1.43
FXN-204ENST00000484259 LCE2DQ5TA82 110 aaPredicted RBP6.09□□□□□ -1.43
FXN-204ENST00000484259 MAMSTRQ6ZN01 415 aa6.08□□□□□ -1.44
FXN-204ENST00000484259 MKRN4PQ13434 485 aaPredicted RBP6.07□□□□□ -1.44
FXN-204ENST00000484259 ATXN8OSP0DMR3 200 aa6.05□□□□□ -1.44
FXN-204ENST00000484259 PLCB2Q00722 1185 aa6.04□□□□□ -1.44
FXN-204ENST00000484259 TPRNQ4KMQ1 711 aa6.04□□□□□ -1.44
FXN-204ENST00000484259 METRNQ9UJH8 293 aa6.04□□□□□ -1.44
FXN-204ENST00000484259 POTEJP0CG39 1038 aa6.02□□□□□ -1.45
FXN-204ENST00000484259 CDAN1Q8IWY9 1227 aa6.02□□□□□ -1.45
FXN-204ENST00000484259 SCUBE2Q9NQ36 999 aa6.02□□□□□ -1.45
FXN-204ENST00000484259 PAK3O75914 559 aaPredicted RBP6.01□□□□□ -1.45
FXN-204ENST00000484259 C7P10643 843 aa6.01□□□□□ -1.45
FXN-204ENST00000484259 GTF3C3Q9Y5Q9 886 aa6.01□□□□□ -1.45
FXN-204ENST00000484259 SLC39A7Q92504 469 aa6□□□□□ -1.45
FXN-204ENST00000484259 PHF12Q96QT6 1004 aa5.98□□□□□ -1.45
FXN-204ENST00000484259 HAP1P54257 671 aaPredicted RBP5.96□□□□□ -1.46
FXN-204ENST00000484259 ASTLQ6HA08 431 aaPredicted RBP5.96□□□□□ -1.46
FXN-204ENST00000484259 ATMINO43313 823 aaPredicted RBP5.93□□□□□ -1.46
FXN-204ENST00000484259 VSIG10Q8N0Z9 540 aa5.93□□□□□ -1.46
FXN-204ENST00000484259 PODXL2Q9NZ53 605 aa5.93□□□□□ -1.46
FXN-204ENST00000484259 MMRN1Q13201 1228 aa5.92□□□□□ -1.46
FXN-204ENST00000484259 CREBZFQ9NS37 354 aa5.92□□□□□ -1.46
FXN-204ENST00000484259 MS4A3Q96HJ5 214 aa5.89□□□□□ -1.47
FXN-204ENST00000484259 FBXO3Q9UK99 471 aa5.89□□□□□ -1.47
FXN-204ENST00000484259 SPNS2Q8IVW8 549 aa5.88□□□□□ -1.47
FXN-204ENST00000484259 ZBTB22O15209 634 aa5.86□□□□□ -1.47
FXN-204ENST00000484259 NPM2Q86SE8 214 aaKnown RBP5.85□□□□□ -1.47
FXN-204ENST00000484259 KLHL34Q8N239 644 aa5.85□□□□□ -1.47
FXN-204ENST00000484259 EIF5BO60841 1220 aaKnown RBP5.84□□□□□ -1.47
FXN-204ENST00000484259 NPM1P06748 294 aaKnown RBP eCLIP5.84□□□□□ -1.47
FXN-204ENST00000484259 ATN1P54259 1190 aaPredicted RBP5.84□□□□□ -1.47
FXN-204ENST00000484259 TMEM132AQ24JP5 1023 aa5.84□□□□□ -1.47
FXN-204ENST00000484259 STAG3Q9UJ98 1225 aa5.84□□□□□ -1.47
FXN-204ENST00000484259 ST18O60284 1047 aa5.82□□□□□ -1.48
FXN-204ENST00000484259 POTEFA5A3E0 1075 aa5.81□□□□□ -1.48
FXN-204ENST00000484259 C14orf37Q86TY3 774 aa5.81□□□□□ -1.48
FXN-204ENST00000484259 SEC24BO95487 1268 aa5.78□□□□□ -1.48
FXN-204ENST00000484259 FKBP8Q14318 412 aa5.76□□□□□ -1.49
FXN-204ENST00000484259 SLAIN1Q8ND83 568 aa5.76□□□□□ -1.49
FXN-204ENST00000484259 DCAF8L2P0C7V8 631 aa5.75□□□□□ -1.49
FXN-204ENST00000484259 BMP2KQ9NSY1 1161 aaPredicted RBP5.75□□□□□ -1.49
FXN-204ENST00000484259 TMEM121BQ9BXQ6 578 aaPredicted RBP5.74□□□□□ -1.49
FXN-204ENST00000484259 COLQQ9Y215 455 aaPredicted RBP5.74□□□□□ -1.49
FXN-204ENST00000484259 MNX1P50219 401 aaPredicted RBP5.73□□□□□ -1.49
FXN-204ENST00000484259 TIE1P35590 1138 aa5.71□□□□□ -1.5
FXN-204ENST00000484259 TSPYL2Q9H2G4 693 aaPredicted RBP5.71□□□□□ -1.5
FXN-204ENST00000484259 KIF12Q96FN5 646 aa5.69□□□□□ -1.5
FXN-204ENST00000484259 TRPC6Q9Y210 931 aa5.69□□□□□ -1.5
FXN-204ENST00000484259 MARVELD3Q96A59 401 aa5.68□□□□□ -1.5
FXN-204ENST00000484259 KDM2AQ9Y2K7 1162 aa5.68□□□□□ -1.5
FXN-204ENST00000484259 CCDC61Q9Y6R9 512 aa5.68□□□□□ -1.5
FXN-204ENST00000484259 SNPHO15079 494 aa5.67□□□□□ -1.5
FXN-204ENST00000484259 IER5LQ5T953 404 aa5.67□□□□□ -1.5
FXN-204ENST00000484259 TTLL13PA6NNM8 815 aa5.66□□□□□ -1.5
FXN-204ENST00000484259 TRIM26Q12899 539 aaPredicted RBP5.65□□□□□ -1.5
FXN-204ENST00000484259 MAP3K13O43283 966 aa5.63□□□□□ -1.51
FXN-204ENST00000484259 TRIM35Q9UPQ4 493 aa5.63□□□□□ -1.51
FXN-204ENST00000484259 SUPT5HO00267 1087 aaKnown RBP5.61□□□□□ -1.51
FXN-204ENST00000484259 EMP3P54852 163 aa5.61□□□□□ -1.51
FXN-204ENST00000484259 KRTAP3-3Q9BYR6 98 aa5.61□□□□□ -1.51
FXN-204ENST00000484259 KRTAP3-2Q9BYR7 98 aa5.61□□□□□ -1.51
FXN-204ENST00000484259 PLCG2P16885 1265 aa5.6□□□□□ -1.51
FXN-204ENST00000484259 NBR1Q14596 966 aa5.59□□□□□ -1.51
FXN-204ENST00000484259 HMGB1P09429 215 aaKnown RBP5.58□□□□□ -1.52
FXN-204ENST00000484259 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.58□□□□□ -1.52
FXN-204ENST00000484259 HRCP23327 699 aa5.57□□□□□ -1.52
FXN-204ENST00000484259 HS3ST6Q96QI5 342 aa5.57□□□□□ -1.52
FXN-204ENST00000484259 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.57□□□□□ -1.52
FXN-204ENST00000484259 SHROOM4Q9ULL8 1493 aa5.56□□□□□ -1.52
FXN-204ENST00000484259 FAM205CA6NFA0 338 aa5.55□□□□□ -1.52
FXN-204ENST00000484259 SPDYE4A6NLX3 237 aa5.55□□□□□ -1.52
FXN-204ENST00000484259 UBTFP17480 764 aaKnown RBP5.55□□□□□ -1.52
FXN-204ENST00000484259 RNF166Q96A37 237 aaPredicted RBP5.54□□□□□ -1.52
FXN-204ENST00000484259 POTEB3A0JP26 581 aa5.53□□□□□ -1.52
FXN-204ENST00000484259 POTEBQ6S5H4 581 aa5.53□□□□□ -1.52
FXN-204ENST00000484259 CDK11AQ9UQ88 783 aaPredicted RBP5.53□□□□□ -1.52
FXN-204ENST00000484259 BBXQ8WY36 941 aaPredicted RBP5.52□□□□□ -1.53
FXN-204ENST00000484259 SGIP1Q9BQI5 828 aa5.52□□□□□ -1.53
FXN-204ENST00000484259 PCDHB13Q9Y5F0 798 aa5.52□□□□□ -1.53
FXN-204ENST00000484259 LOC105371045A0A1W2PR82 267 aa5.51□□□□□ -1.53
FXN-204ENST00000484259 IRX5P78411 483 aaPredicted RBP5.51□□□□□ -1.53
FXN-204ENST00000484259 CCDC9Q9Y3X0 531 aaKnown RBP5.51□□□□□ -1.53
FXN-204ENST00000484259 TMEM106CQ9BVX2 250 aa5.5□□□□□ -1.53
FXN-204ENST00000484259 PAXIP1Q6ZW49 1069 aaPredicted RBP5.49□□□□□ -1.53
FXN-204ENST00000484259 OCEL1Q9H607 264 aa5.49□□□□□ -1.53
FXN-204ENST00000484259 RASEFQ8IZ41 740 aa5.48□□□□□ -1.53
FXN-204ENST00000484259 CFAP44Q96MT7 982 aa5.48□□□□□ -1.53
FXN-204ENST00000484259 CDK11BP21127 795 aaKnown RBP5.47□□□□□ -1.53
FXN-204ENST00000484259 PLEKHG5O94827 1062 aa5.46□□□□□ -1.54
FXN-204ENST00000484259 MYT1LQ9UL68 1186 aa5.46□□□□□ -1.54
FXN-204ENST00000484259 HSP90B1P14625 803 aaKnown RBP5.45□□□□□ -1.54
FXN-204ENST00000484259 C3orf67Q6ZVT6 689 aa5.45□□□□□ -1.54
FXN-204ENST00000484259 IFNL1Q8IU54 200 aa5.45□□□□□ -1.54
FXN-204ENST00000484259 ZBTB7CA1YPR0 619 aa5.44□□□□□ -1.54
FXN-204ENST00000484259 PDIA4P13667 645 aaKnown RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms