RNA–Protein interactions for RNA: ENST00000481965.6

SEC22A-207, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3 BASIC

Gene SEC22A, Length 673 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-207ENST00000481965 MNX1P50219 401 aaPredicted RBP14.56□□□□□ -0.08
SEC22A-207ENST00000481965 SPDYE1Q8NFV5 336 aaPredicted RBP14.56□□□□□ -0.08
SEC22A-207ENST00000481965 CREBZFQ9NS37 354 aa14.56□□□□□ -0.08
SEC22A-207ENST00000481965 NKX1-1Q15270 411 aaPredicted RBP14.53□□□□□ -0.08
SEC22A-207ENST00000481965 AKT1S1Q96B36 256 aa14.53□□□□□ -0.08
SEC22A-207ENST00000481965 DCAF8Q5TAQ9 597 aa14.51□□□□□ -0.09
SEC22A-207ENST00000481965 RIOK3O14730 519 aaKnown RBP14.49□□□□□ -0.09
SEC22A-207ENST00000481965 TPRNQ4KMQ1 711 aa14.49□□□□□ -0.09
SEC22A-207ENST00000481965 CLEC11AQ9Y240 323 aa14.47□□□□□ -0.09
SEC22A-207ENST00000481965 RBM42Q9BTD8 480 aaKnown RBP14.46□□□□□ -0.09
SEC22A-207ENST00000481965 PRR29P0C7W0 189 aa14.44□□□□□ -0.1
SEC22A-207ENST00000481965 REM2Q8IYK8 340 aaPredicted RBP14.44□□□□□ -0.1
SEC22A-207ENST00000481965 RASEFQ8IZ41 740 aa14.43□□□□□ -0.1
SEC22A-207ENST00000481965 GTPBP6O43824 516 aaPredicted RBP14.42□□□□□ -0.1
SEC22A-207ENST00000481965 FAM212AQ96EL1 285 aa14.41□□□□□ -0.1
SEC22A-207ENST00000481965 CHRM1P11229 460 aaPredicted RBP14.39□□□□□ -0.11
SEC22A-207ENST00000481965 VGFO15240 615 aaPredicted RBP14.36□□□□□ -0.11
SEC22A-207ENST00000481965 STK25O00506 426 aa14.35□□□□□ -0.11
SEC22A-207ENST00000481965 SGIP1Q9BQI5 828 aa14.32□□□□□ -0.12
SEC22A-207ENST00000481965 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.29□□□□□ -0.12
SEC22A-207ENST00000481965 ZFP91Q96JP5 570 aaPredicted RBP14.29□□□□□ -0.12
SEC22A-207ENST00000481965 PITPNM1O00562 1244 aa14.28□□□□□ -0.12
SEC22A-207ENST00000481965 PYGBP11216 843 aa14.27□□□□□ -0.13
SEC22A-207ENST00000481965 BCL11BQ9C0K0 894 aaPredicted RBP14.26□□□□□ -0.13
SEC22A-207ENST00000481965 NBR1Q14596 966 aa14.24□□□□□ -0.13
SEC22A-207ENST00000481965 STK24Q9Y6E0 443 aa14.24□□□□□ -0.13
SEC22A-207ENST00000481965 CHADLQ6NUI6 762 aa14.12□□□□□ -0.15
SEC22A-207ENST00000481965 RYDENQ9NUL5 291 aaKnown RBP14.08□□□□□ -0.16
SEC22A-207ENST00000481965 TSPYL2Q9H2G4 693 aaPredicted RBP14.07□□□□□ -0.16
SEC22A-207ENST00000481965 ZNF467Q7Z7K2 595 aaPredicted RBP14.02□□□□□ -0.17
SEC22A-207ENST00000481965 CADPS2Q86UW7 1296 aa14.02□□□□□ -0.17
SEC22A-207ENST00000481965 FARP1Q9Y4F1 1045 aaPredicted RBP14.02□□□□□ -0.17
SEC22A-207ENST00000481965 PCDHB8Q9UN66 801 aa14□□□□□ -0.17
SEC22A-207ENST00000481965 PCDHB13Q9Y5F0 798 aa14□□□□□ -0.17
SEC22A-207ENST00000481965 PDAP1Q13442 181 aaKnown RBP13.98□□□□□ -0.17
SEC22A-207ENST00000481965 CCDC61Q9Y6R9 512 aa13.98□□□□□ -0.17
SEC22A-207ENST00000481965 MFRPQ9BY79 579 aa13.93□□□□□ -0.18
SEC22A-207ENST00000481965 PSEN1P49768 467 aa13.9□□□□□ -0.18
SEC22A-207ENST00000481965 ZNF579Q8NAF0 562 aaKnown RBP13.9□□□□□ -0.18
SEC22A-207ENST00000481965 KCNV2Q8TDN2 545 aa13.9□□□□□ -0.18
SEC22A-207ENST00000481965 PRKAR2AP13861 404 aaKnown RBP13.89□□□□□ -0.19
SEC22A-207ENST00000481965 P3H3Q8IVL6 736 aa13.89□□□□□ -0.19
SEC22A-207ENST00000481965 FXR2P51116 673 aaKnown RBP eCLIP13.85□□□□□ -0.19
SEC22A-207ENST00000481965 PPP1R37O75864 691 aa13.83□□□□□ -0.2
SEC22A-207ENST00000481965 IFNL1Q8IU54 200 aa13.83□□□□□ -0.2
SEC22A-207ENST00000481965 FBXO22Q8NEZ5 403 aa13.81□□□□□ -0.2
SEC22A-207ENST00000481965 WDR70Q9NW82 654 aa13.8□□□□□ -0.2
SEC22A-207ENST00000481965 MAP3K13O43283 966 aa13.78□□□□□ -0.2
SEC22A-207ENST00000481965 EFCAB3Q8N7B9 438 aa13.78□□□□□ -0.2
SEC22A-207ENST00000481965 KIF12Q96FN5 646 aa13.77□□□□□ -0.21
SEC22A-207ENST00000481965 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.76□□□□□ -0.21
SEC22A-207ENST00000481965 PHF8Q9UPP1 1060 aa13.74□□□□□ -0.21
SEC22A-207ENST00000481965 CABP2Q9NPB3 220 aa13.73□□□□□ -0.21
SEC22A-207ENST00000481965 LMOD2Q6P5Q4 547 aa13.72□□□□□ -0.21
SEC22A-207ENST00000481965 NLRP6P59044 892 aa13.7□□□□□ -0.22
SEC22A-207ENST00000481965 SOX12O15370 315 aa13.69□□□□□ -0.22
SEC22A-207ENST00000481965 PAK3O75914 559 aaPredicted RBP13.69□□□□□ -0.22
SEC22A-207ENST00000481965 PIP4P2Q8N4L2 257 aa13.68□□□□□ -0.22
SEC22A-207ENST00000481965 ARHGEF1Q92888 912 aaKnown RBP13.65□□□□□ -0.22
SEC22A-207ENST00000481965 MS4A4AQ96JQ5 239 aa13.64□□□□□ -0.23
SEC22A-207ENST00000481965 E2F4Q16254 413 aa13.63□□□□□ -0.23
SEC22A-207ENST00000481965 NCKAP5LQ9HCH0 1330 aa13.63□□□□□ -0.23
SEC22A-207ENST00000481965 CHRDL2Q6WN34 429 aa13.62□□□□□ -0.23
SEC22A-207ENST00000481965 TIMELESSQ9UNS1 1208 aa13.61□□□□□ -0.23
SEC22A-207ENST00000481965 GTF3C3Q9Y5Q9 886 aa13.59□□□□□ -0.23
SEC22A-207ENST00000481965 PHF12Q96QT6 1004 aa13.58□□□□□ -0.24
SEC22A-207ENST00000481965 SEMA3EO15041 775 aa13.57□□□□□ -0.24
SEC22A-207ENST00000481965 TMEM132AQ24JP5 1023 aa13.57□□□□□ -0.24
SEC22A-207ENST00000481965 ZRANB1Q9UGI0 708 aa13.57□□□□□ -0.24
SEC22A-207ENST00000481965 TESPA1A2RU30 521 aaPredicted RBP13.56□□□□□ -0.24
SEC22A-207ENST00000481965 TULP1O00294 542 aaPredicted RBP13.56□□□□□ -0.24
SEC22A-207ENST00000481965 MFSD10Q14728 455 aa13.54□□□□□ -0.24
SEC22A-207ENST00000481965 CD44P16070 742 aaKnown RBP13.53□□□□□ -0.24
SEC22A-207ENST00000481965 ZC3H15Q8WU90 426 aaKnown RBP13.53□□□□□ -0.24
SEC22A-207ENST00000481965 CRISPLD2Q9H0B8 497 aa13.52□□□□□ -0.25
SEC22A-207ENST00000481965 TRPC6Q9Y210 931 aa13.52□□□□□ -0.25
SEC22A-207ENST00000481965 LARP6Q9BRS8 491 aaKnown RBP13.51□□□□□ -0.25
SEC22A-207ENST00000481965 PDE4AP27815 886 aa13.48□□□□□ -0.25
SEC22A-207ENST00000481965 BRPF1P55201 1214 aaPredicted RBP13.48□□□□□ -0.25
SEC22A-207ENST00000481965 TMEM106CQ9BVX2 250 aa13.47□□□□□ -0.25
SEC22A-207ENST00000481965 MS4A3Q96HJ5 214 aa13.45□□□□□ -0.26
SEC22A-207ENST00000481965 ARIH1Q9Y4X5 557 aaPredicted RBP13.45□□□□□ -0.26
SEC22A-207ENST00000481965 CAMK2BQ13554 666 aa13.43□□□□□ -0.26
SEC22A-207ENST00000481965 DDX27Q96GQ7 796 aaKnown RBP13.43□□□□□ -0.26
SEC22A-207ENST00000481965 SLC24A3Q9HC58 644 aa13.41□□□□□ -0.26
SEC22A-207ENST00000481965 ILDR1Q86SU0 546 aaPredicted RBP13.39□□□□□ -0.27
SEC22A-207ENST00000481965 GOLGA2Q08379 1002 aa13.38□□□□□ -0.27
SEC22A-207ENST00000481965 ZMYND10O75800 440 aa13.36□□□□□ -0.27
SEC22A-207ENST00000481965 MKRN3Q13064 507 aaKnown RBP13.35□□□□□ -0.27
SEC22A-207ENST00000481965 C19orf67A6NJJ6 358 aa13.34□□□□□ -0.27
SEC22A-207ENST00000481965 TTLL13PA6NNM8 815 aa13.32□□□□□ -0.28
SEC22A-207ENST00000481965 TIE1P35590 1138 aa13.31□□□□□ -0.28
SEC22A-207ENST00000481965 SMYD5Q6GMV2 418 aa13.31□□□□□ -0.28
SEC22A-207ENST00000481965 NEUROD2Q15784 382 aa13.3□□□□□ -0.28
SEC22A-207ENST00000481965 MLLT3P42568 568 aaPredicted RBP13.29□□□□□ -0.28
SEC22A-207ENST00000481965 PPP1R15BQ5SWA1 713 aa13.28□□□□□ -0.28
SEC22A-207ENST00000481965 GPHNQ9NQX3 736 aaPredicted RBP13.28□□□□□ -0.28
SEC22A-207ENST00000481965 BMP2KQ9NSY1 1161 aaPredicted RBP13.28□□□□□ -0.28
SEC22A-207ENST00000481965 BARGINQ6ZT62 677 aa13.27□□□□□ -0.29
SEC22A-207ENST00000481965 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.27□□□□□ -0.293e-9■■■■□ 19.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms