RNA–Protein interactions for RNA: ENST00000481579.5

USP33-209, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 2

Gene USP33, Length 2,866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-209ENST00000481579 TRHP20396 242 aaPredicted RBP9.36□□□□□ -0.91
USP33-209ENST00000481579 SPINK5Q9NQ38 1064 aaPredicted RBP9.36□□□□□ -0.91
USP33-209ENST00000481579 TOPBP1Q92547 1522 aa9.35□□□□□ -0.91
USP33-209ENST00000481579 URB2Q14146 1524 aaKnown RBP9.35□□□□□ -0.91
USP33-209ENST00000481579 TAOK2Q9UL54 1235 aa9.34□□□□□ -0.91
USP33-209ENST00000481579 TPRNQ4KMQ1 711 aa9.33□□□□□ -0.92
USP33-209ENST00000481579 NPM1P06748 294 aaKnown RBP eCLIP9.32□□□□□ -0.92
USP33-209ENST00000481579 CFAP44Q96MT7 982 aa9.3□□□□□ -0.92
USP33-209ENST00000481579 TARBP1Q13395 1621 aaKnown RBP9.3□□□□□ -0.92
USP33-209ENST00000481579 EEA1Q15075 1411 aa9.3□□□□□ -0.92
USP33-209ENST00000481579 FBXO3Q9UK99 471 aa9.3□□□□□ -0.92
USP33-209ENST00000481579 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.3□□□□□ -0.92
USP33-209ENST00000481579 HNRNPUL2Q1KMD3 747 aaKnown RBP9.3□□□□□ -0.92
USP33-209ENST00000481579 ABCA10Q8WWZ4 1543 aa9.29□□□□□ -0.92
USP33-209ENST00000481579 ERCC6Q03468 1493 aa9.28□□□□□ -0.92
USP33-209ENST00000481579 POLA2Q14181 598 aa9.28□□□□□ -0.92
USP33-209ENST00000481579 CUX2O14529 1486 aa9.28□□□□□ -0.92
USP33-209ENST00000481579 POLA1P09884 1462 aaPredicted RBP9.28□□□□□ -0.92
USP33-209ENST00000481579 FGD5Q6ZNL6 1462 aa9.28□□□□□ -0.92
USP33-209ENST00000481579 IFT140Q96RY7 1462 aa9.27□□□□□ -0.93
USP33-209ENST00000481579 PAXIP1Q6ZW49 1069 aaPredicted RBP9.26□□□□□ -0.93
USP33-209ENST00000481579 ABCA5Q8WWZ7 1642 aa9.26□□□□□ -0.93
USP33-209ENST00000481579 BCANQ96GW7 911 aa9.25□□□□□ -0.93
USP33-209ENST00000481579 ABCB7O75027 752 aa9.22□□□□□ -0.93
USP33-209ENST00000481579 TRIM41Q8WV44 630 aa9.22□□□□□ -0.93
USP33-209ENST00000481579 ERICH3Q5RHP9 1530 aa9.21□□□□□ -0.93
USP33-209ENST00000481579 CUL7Q14999 1698 aa9.21□□□□□ -0.94
USP33-209ENST00000481579 SOGA1O94964 1423 aa9.2□□□□□ -0.94
USP33-209ENST00000481579 KLHL34Q8N239 644 aa9.2□□□□□ -0.94
USP33-209ENST00000481579 KIF21BO75037 1637 aa9.2□□□□□ -0.94
USP33-209ENST00000481579 PBRM1Q86U86 1689 aa9.19□□□□□ -0.94
USP33-209ENST00000481579 RGL2O15211 777 aa9.19□□□□□ -0.94
USP33-209ENST00000481579 PROM2Q8N271 834 aa9.19□□□□□ -0.94
USP33-209ENST00000481579 TSHZ2Q9NRE2 1034 aa9.19□□□□□ -0.94
USP33-209ENST00000481579 KIF27Q86VH2 1401 aa9.19□□□□□ -0.94
USP33-209ENST00000481579 EIF4G3O43432 1585 aaKnown RBP9.16□□□□□ -0.94
USP33-209ENST00000481579 ECM2O94769 699 aaPredicted RBP9.16□□□□□ -0.94
USP33-209ENST00000481579 RAD54L2Q9Y4B4 1467 aa9.15□□□□□ -0.94
USP33-209ENST00000481579 CAPN15O75808 1086 aa9.15□□□□□ -0.94
USP33-209ENST00000481579 PRXQ9BXM0 1461 aa9.14□□□□□ -0.95
USP33-209ENST00000481579 GRIN2BQ13224 1484 aa9.13□□□□□ -0.95
USP33-209ENST00000481579 GAPVD1Q14C86 1478 aa9.13□□□□□ -0.95
USP33-209ENST00000481579 ADAMTS12P58397 1594 aa9.12□□□□□ -0.95
USP33-209ENST00000481579 MAGI1Q96QZ7 1491 aaPredicted RBP9.12□□□□□ -0.95
USP33-209ENST00000481579 IGF1RP08069 1367 aa9.1□□□□□ -0.95
USP33-209ENST00000481579 VSIG10Q8N0Z9 540 aa9.1□□□□□ -0.95
USP33-209ENST00000481579 RUSC2Q8N2Y8 1516 aa9.1□□□□□ -0.95
USP33-209ENST00000481579 ZNF608Q9ULD9 1512 aaPredicted RBP9.08□□□□□ -0.96
USP33-209ENST00000481579 FHAD1B1AJZ9 1412 aa9.07□□□□□ -0.96
USP33-209ENST00000481579 GOLGA3Q08378 1498 aa9.07□□□□□ -0.96
USP33-209ENST00000481579 RAPGEF2Q9Y4G8 1499 aa9.06□□□□□ -0.96
USP33-209ENST00000481579 CHGAP10645 457 aaKnown RBP9.06□□□□□ -0.96
USP33-209ENST00000481579 CTTNBP2Q8WZ74 1663 aa9.05□□□□□ -0.96
USP33-209ENST00000481579 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.05□□□□□ -0.96
USP33-209ENST00000481579 SYNJ2O15056 1496 aa9.04□□□□□ -0.96
USP33-209ENST00000481579 AQRO60306 1485 aaKnown RBP eCLIP9.03□□□□□ -0.962e-6■■□□□ 14.1
USP33-209ENST00000481579 PLCD3Q8N3E9 789 aa9.02□□□□□ -0.96
USP33-209ENST00000481579 CARMIL1Q5VZK9 1371 aa9.02□□□□□ -0.97
USP33-209ENST00000481579 TDRD9Q8NDG6 1382 aaKnown RBP9.02□□□□□ -0.97
USP33-209ENST00000481579 CIZ1Q9ULV3 898 aaPredicted RBP9.02□□□□□ -0.97
USP33-209ENST00000481579 SNAPC4Q5SXM2 1469 aa9.02□□□□□ -0.97
USP33-209ENST00000481579 TNIKQ9UKE5 1360 aa9.01□□□□□ -0.97
USP33-209ENST00000481579 OSCARQ8IYS5 282 aa9.01□□□□□ -0.97
USP33-209ENST00000481579 BBXQ8WY36 941 aaPredicted RBP9□□□□□ -0.97
USP33-209ENST00000481579 SPOCK2Q92563 424 aa9□□□□□ -0.97
USP33-209ENST00000481579 GRIN2AQ12879 1464 aa9□□□□□ -0.97
USP33-209ENST00000481579 NUP160Q12769 1436 aa9□□□□□ -0.97
USP33-209ENST00000481579 TIMELESSQ9UNS1 1208 aa8.99□□□□□ -0.97
USP33-209ENST00000481579 CHD1O14646 1710 aa8.98□□□□□ -0.97
USP33-209ENST00000481579 MIER1Q8N108 512 aa8.98□□□□□ -0.97
USP33-209ENST00000481579 SHROOM2Q13796 1616 aa8.97□□□□□ -0.97
USP33-209ENST00000481579 EFCAB5A4FU69 1503 aa8.97□□□□□ -0.97
USP33-209ENST00000481579 SPRYD3Q8NCJ5 442 aa8.97□□□□□ -0.97
USP33-209ENST00000481579 SAMD9Q5K651 1589 aa8.96□□□□□ -0.97
USP33-209ENST00000481579 TULP1O00294 542 aaPredicted RBP8.96□□□□□ -0.98
USP33-209ENST00000481579 CLASP1Q7Z460 1538 aa8.96□□□□□ -0.98
USP33-209ENST00000481579 CEP170Q5SW79 1584 aa8.96□□□□□ -0.98
USP33-209ENST00000481579 KIAA0586Q9BVV6 1533 aa8.95□□□□□ -0.98
USP33-209ENST00000481579 UGGT2Q9NYU1 1516 aa8.95□□□□□ -0.98
USP33-209ENST00000481579 ZNF692Q9BU19 519 aaPredicted RBP8.95□□□□□ -0.98
USP33-209ENST00000481579 IQGAP2Q13576 1575 aa8.94□□□□□ -0.98
USP33-209ENST00000481579 RNF25Q96BH1 459 aaPredicted RBP8.91□□□□□ -0.98
USP33-209ENST00000481579 APLP2Q06481 763 aa8.88□□□□□ -0.99
USP33-209ENST00000481579 KIAA0556O60303 1618 aa8.87□□□□□ -0.99
USP33-209ENST00000481579 CEP162Q5TB80 1403 aa8.87□□□□□ -0.99
USP33-209ENST00000481579 RNF39Q9H2S5 420 aa8.87□□□□□ -0.99
USP33-209ENST00000481579 ARHGAP35Q9NRY4 1499 aa8.85□□□□□ -0.99
USP33-209ENST00000481579 DISP1Q96F81 1524 aa8.85□□□□□ -0.99
USP33-209ENST00000481579 NKX1-1Q15270 411 aaPredicted RBP8.85□□□□□ -0.99
USP33-209ENST00000481579 FAM9AQ8IZU1 332 aaPredicted RBP8.85□□□□□ -0.99
USP33-209ENST00000481579 MAP3K1Q13233 1512 aa8.84□□□□□ -0.99
USP33-209ENST00000481579 CHMP7Q8WUX9 453 aaPredicted RBP8.84□□□□□ -0.99
USP33-209ENST00000481579 CLIP1P30622 1438 aa8.84□□□□□ -0.99
USP33-209ENST00000481579 ARAP1Q96P48 1450 aa8.84□□□□□ -0.99
USP33-209ENST00000481579 NBR1Q14596 966 aa8.83□□□□□ -1
USP33-209ENST00000481579 LOC105371045A0A1W2PR82 267 aa8.8□□□□□ -1
USP33-209ENST00000481579 FMN1Q68DA7 1419 aa8.8□□□□□ -1
USP33-209ENST00000481579 CARMIL2Q6F5E8 1435 aa8.8□□□□□ -1
USP33-209ENST00000481579 VPS8Q8N3P4 1428 aa8.8□□□□□ -1
USP33-209ENST00000481579 UBTFP17480 764 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms