RNA–Protein interactions for RNA: ENST00000479034.5

SRRM1-212, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 2,671 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-212ENST00000479034 CAPN15O75808 1086 aa11.95□□□□□ -0.5
SRRM1-212ENST00000479034 TDRD9Q8NDG6 1382 aaKnown RBP11.95□□□□□ -0.5
SRRM1-212ENST00000479034 FGD5Q6ZNL6 1462 aa11.91□□□□□ -0.5
SRRM1-212ENST00000479034 TOPBP1Q92547 1522 aa11.9□□□□□ -0.5
SRRM1-212ENST00000479034 RNF39Q9H2S5 420 aa11.9□□□□□ -0.5
SRRM1-212ENST00000479034 FBLN2P98095 1184 aa11.89□□□□□ -0.51
SRRM1-212ENST00000479034 POLA1P09884 1462 aaPredicted RBP11.87□□□□□ -0.51
SRRM1-212ENST00000479034 AQRO60306 1485 aaKnown RBP eCLIP11.87□□□□□ -0.515e-7■■■■□ 24.1
SRRM1-212ENST00000479034 MRC2Q9UBG0 1479 aa11.86□□□□□ -0.51
SRRM1-212ENST00000479034 ZNF608Q9ULD9 1512 aaPredicted RBP11.86□□□□□ -0.51
SRRM1-212ENST00000479034 CUX2O14529 1486 aa11.84□□□□□ -0.51
SRRM1-212ENST00000479034 IFNLR1Q8IU57 520 aaPredicted RBP11.82□□□□□ -0.52
SRRM1-212ENST00000479034 TTBK1Q5TCY1 1321 aaPredicted RBP11.81□□□□□ -0.52
SRRM1-212ENST00000479034 TOP2BQ02880 1626 aa11.81□□□□□ -0.52
SRRM1-212ENST00000479034 UBTFP17480 764 aaKnown RBP11.79□□□□□ -0.52
SRRM1-212ENST00000479034 VASPP50552 380 aaPredicted RBP11.79□□□□□ -0.52
SRRM1-212ENST00000479034 DNMBPQ6XZF7 1577 aa11.79□□□□□ -0.52
SRRM1-212ENST00000479034 THOC2Q8NI27 1593 aaKnown RBP11.78□□□□□ -0.52
SRRM1-212ENST00000479034 PRDM2Q13029 1718 aa11.77□□□□□ -0.53
SRRM1-212ENST00000479034 PROM2Q8N271 834 aa11.76□□□□□ -0.53
SRRM1-212ENST00000479034 APLP2Q06481 763 aa11.75□□□□□ -0.53
SRRM1-212ENST00000479034 WDR62O43379 1518 aa11.74□□□□□ -0.53
SRRM1-212ENST00000479034 P3H3Q8IVL6 736 aa11.72□□□□□ -0.53
SRRM1-212ENST00000479034 BIVM-ERCC5R4GMW8 1640 aa11.72□□□□□ -0.53
SRRM1-212ENST00000479034 PPARGC1BQ86YN6 1023 aaKnown RBP11.71□□□□□ -0.53
SRRM1-212ENST00000479034 FBXO3Q9UK99 471 aa11.71□□□□□ -0.53
SRRM1-212ENST00000479034 IGF1RP08069 1367 aa11.7□□□□□ -0.54
SRRM1-212ENST00000479034 KIF27Q86VH2 1401 aa11.7□□□□□ -0.54
SRRM1-212ENST00000479034 RAPGEF2Q9Y4G8 1499 aa11.68□□□□□ -0.54
SRRM1-212ENST00000479034 GAPVD1Q14C86 1478 aa11.68□□□□□ -0.54
SRRM1-212ENST00000479034 CHMP7Q8WUX9 453 aaPredicted RBP11.67□□□□□ -0.54
SRRM1-212ENST00000479034 TARBP1Q13395 1621 aaKnown RBP11.66□□□□□ -0.54
SRRM1-212ENST00000479034 ABCA10Q8WWZ4 1543 aa11.65□□□□□ -0.54
SRRM1-212ENST00000479034 CARMIL1Q5VZK9 1371 aa11.65□□□□□ -0.55
SRRM1-212ENST00000479034 ARID3CA6NKF2 412 aa11.64□□□□□ -0.55
SRRM1-212ENST00000479034 OSCARQ8IYS5 282 aa11.64□□□□□ -0.55
SRRM1-212ENST00000479034 IFT140Q96RY7 1462 aa11.64□□□□□ -0.55
SRRM1-212ENST00000479034 SNAPC4Q5SXM2 1469 aa11.63□□□□□ -0.55
SRRM1-212ENST00000479034 PKD2Q13563 968 aa11.63□□□□□ -0.55
SRRM1-212ENST00000479034 EIF4G3O43432 1585 aaKnown RBP11.62□□□□□ -0.55
SRRM1-212ENST00000479034 C1QBPQ07021 282 aaKnown RBP11.61□□□□□ -0.55
SRRM1-212ENST00000479034 ATP1B4Q9UN42 357 aaPredicted RBP11.59□□□□□ -0.55
SRRM1-212ENST00000479034 DSG3P32926 999 aa11.58□□□□□ -0.56
SRRM1-212ENST00000479034 GRIN2BQ13224 1484 aa11.56□□□□□ -0.56
SRRM1-212ENST00000479034 ABCA5Q8WWZ7 1642 aa11.54□□□□□ -0.56
SRRM1-212ENST00000479034 WDR97A6NE52 1622 aa11.53□□□□□ -0.56
SRRM1-212ENST00000479034 PRXQ9BXM0 1461 aa11.53□□□□□ -0.56
SRRM1-212ENST00000479034 PLCB2Q00722 1185 aa11.53□□□□□ -0.56
SRRM1-212ENST00000479034 ZNF692Q9BU19 519 aaPredicted RBP11.53□□□□□ -0.56
SRRM1-212ENST00000479034 GOLGA3Q08378 1498 aa11.5□□□□□ -0.57
SRRM1-212ENST00000479034 EEA1Q15075 1411 aa11.49□□□□□ -0.57
SRRM1-212ENST00000479034 PBRM1Q86U86 1689 aa11.48□□□□□ -0.57
SRRM1-212ENST00000479034 FHAD1B1AJZ9 1412 aa11.48□□□□□ -0.57
SRRM1-212ENST00000479034 CEP162Q5TB80 1403 aa11.48□□□□□ -0.57
SRRM1-212ENST00000479034 KLHL34Q8N239 644 aa11.47□□□□□ -0.57
SRRM1-212ENST00000479034 GRIN2AQ12879 1464 aa11.45□□□□□ -0.58
SRRM1-212ENST00000479034 ERICH3Q5RHP9 1530 aa11.45□□□□□ -0.58
SRRM1-212ENST00000479034 HAP1P54257 671 aaPredicted RBP11.45□□□□□ -0.58
SRRM1-212ENST00000479034 ADAMTS12P58397 1594 aa11.44□□□□□ -0.58
SRRM1-212ENST00000479034 JPH4Q96JJ6 628 aa11.44□□□□□ -0.58
SRRM1-212ENST00000479034 SYNJ2O15056 1496 aa11.44□□□□□ -0.58
SRRM1-212ENST00000479034 FHOD3Q2V2M9 1422 aa11.43□□□□□ -0.58
SRRM1-212ENST00000479034 CLIP1P30622 1438 aa11.43□□□□□ -0.58
SRRM1-212ENST00000479034 TNIKQ9UKE5 1360 aa11.42□□□□□ -0.58
SRRM1-212ENST00000479034 NPM1P06748 294 aaKnown RBP eCLIP11.41□□□□□ -0.58
SRRM1-212ENST00000479034 MAGI1Q96QZ7 1491 aaPredicted RBP11.41□□□□□ -0.58
SRRM1-212ENST00000479034 CEP170Q5SW79 1584 aa11.41□□□□□ -0.58
SRRM1-212ENST00000479034 CHD1O14646 1710 aa11.39□□□□□ -0.59
SRRM1-212ENST00000479034 ZBTB12Q9Y330 459 aaPredicted RBP11.39□□□□□ -0.59
SRRM1-212ENST00000479034 KIF21BO75037 1637 aa11.39□□□□□ -0.59
SRRM1-212ENST00000479034 PLCD3Q8N3E9 789 aa11.39□□□□□ -0.59
SRRM1-212ENST00000479034 ERCC6L2Q5T890 1561 aa11.37□□□□□ -0.59
SRRM1-212ENST00000479034 RGL2O15211 777 aa11.37□□□□□ -0.59
SRRM1-212ENST00000479034 ARAP1Q96P48 1450 aa11.37□□□□□ -0.59
SRRM1-212ENST00000479034 CYB5RLQ6IPT4 315 aa11.37□□□□□ -0.59
SRRM1-212ENST00000479034 SSUH2Q9Y2M2 353 aa11.36□□□□□ -0.59
SRRM1-212ENST00000479034 CUL7Q14999 1698 aa11.36□□□□□ -0.59
SRRM1-212ENST00000479034 ARHGAP35Q9NRY4 1499 aa11.35□□□□□ -0.59
SRRM1-212ENST00000479034 ECM2O94769 699 aaPredicted RBP11.35□□□□□ -0.59
SRRM1-212ENST00000479034 MIER1Q8N108 512 aa11.35□□□□□ -0.59
SRRM1-212ENST00000479034 PRG4Q92954 1404 aaPredicted RBP11.35□□□□□ -0.59
SRRM1-212ENST00000479034 KANK4Q5T7N3 995 aaPredicted RBP11.32□□□□□ -0.6
SRRM1-212ENST00000479034 SPOCK2Q92563 424 aa11.31□□□□□ -0.6
SRRM1-212ENST00000479034 NUP160Q12769 1436 aa11.31□□□□□ -0.6
SRRM1-212ENST00000479034 SPDYE2BA6NHP3 402 aa11.3□□□□□ -0.6
SRRM1-212ENST00000479034 SPDYE6P0CI01 402 aa11.3□□□□□ -0.6
SRRM1-212ENST00000479034 SPDYE2Q495Y8 402 aa11.3□□□□□ -0.6
SRRM1-212ENST00000479034 IQGAP2Q13576 1575 aa11.3□□□□□ -0.6
SRRM1-212ENST00000479034 KIAA0586Q9BVV6 1533 aa11.3□□□□□ -0.6
SRRM1-212ENST00000479034 PRKCSHP14314 528 aaPredicted RBP11.29□□□□□ -0.6
SRRM1-212ENST00000479034 PLB1Q6P1J6 1458 aa11.28□□□□□ -0.6
SRRM1-212ENST00000479034 DISP1Q96F81 1524 aa11.27□□□□□ -0.61
SRRM1-212ENST00000479034 CFAP44Q96MT7 982 aa11.26□□□□□ -0.61
SRRM1-212ENST00000479034 KDM2AQ9Y2K7 1162 aa11.26□□□□□ -0.61
SRRM1-212ENST00000479034 KCNH8Q96L42 1107 aa11.25□□□□□ -0.61
SRRM1-212ENST00000479034 CIZ1Q9ULV3 898 aaPredicted RBP11.25□□□□□ -0.61
SRRM1-212ENST00000479034 PAXIP1Q6ZW49 1069 aaPredicted RBP11.24□□□□□ -0.61
SRRM1-212ENST00000479034 CTTNBP2Q8WZ74 1663 aa11.23□□□□□ -0.61
SRRM1-212ENST00000479034 ITGAEP38570 1179 aa11.23□□□□□ -0.61
SRRM1-212ENST00000479034 PTPRGP23470 1445 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms