RNA–Protein interactions for RNA: ENST00000478954.1

STRADBP1-201, Transcript of STE20-related kinase adaptor beta pseudogene 1, humanhuman

BASIC

Gene STRADBP1, Length 1,281 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADBP1-201ENST00000478954 DCAF8Q5TAQ9 597 aa12.58□□□□□ -0.4
STRADBP1-201ENST00000478954 FAM212AQ96EL1 285 aa12.58□□□□□ -0.4
STRADBP1-201ENST00000478954 CD44P16070 742 aaKnown RBP12.57□□□□□ -0.4
STRADBP1-201ENST00000478954 GSE1Q14687 1217 aa12.53□□□□□ -0.4
STRADBP1-201ENST00000478954 CCDC61Q9Y6R9 512 aa12.52□□□□□ -0.41
STRADBP1-201ENST00000478954 ZRANB1Q9UGI0 708 aa12.51□□□□□ -0.41
STRADBP1-201ENST00000478954 PAK3O75914 559 aaPredicted RBP12.47□□□□□ -0.41
STRADBP1-201ENST00000478954 ECM2O94769 699 aaPredicted RBP12.47□□□□□ -0.41
STRADBP1-201ENST00000478954 PYGBP11216 843 aa12.47□□□□□ -0.41
STRADBP1-201ENST00000478954 PHF12Q96QT6 1004 aa12.45□□□□□ -0.42
STRADBP1-201ENST00000478954 GABBR2O75899 941 aa12.43□□□□□ -0.42
STRADBP1-201ENST00000478954 PLCB2Q00722 1185 aa12.42□□□□□ -0.42
STRADBP1-201ENST00000478954 RGL2O15211 777 aa12.41□□□□□ -0.42
STRADBP1-201ENST00000478954 ZNF579Q8NAF0 562 aaKnown RBP12.41□□□□□ -0.42
STRADBP1-201ENST00000478954 RNF25Q96BH1 459 aaPredicted RBP12.41□□□□□ -0.42
STRADBP1-201ENST00000478954 TRIM41Q8WV44 630 aa12.38□□□□□ -0.43
STRADBP1-201ENST00000478954 CHRM1P11229 460 aaPredicted RBP12.37□□□□□ -0.43
STRADBP1-201ENST00000478954 KIF12Q96FN5 646 aa12.37□□□□□ -0.43
STRADBP1-201ENST00000478954 MAP3K13O43283 966 aa12.36□□□□□ -0.43
STRADBP1-201ENST00000478954 MS4A3Q96HJ5 214 aa12.3□□□□□ -0.44
STRADBP1-201ENST00000478954 PCDHB8Q9UN66 801 aa12.3□□□□□ -0.44
STRADBP1-201ENST00000478954 PCDHB13Q9Y5F0 798 aa12.3□□□□□ -0.44
STRADBP1-201ENST00000478954 IFNL1Q8IU54 200 aa12.29□□□□□ -0.44
STRADBP1-201ENST00000478954 GALR2O43603 387 aaPredicted RBP12.28□□□□□ -0.44
STRADBP1-201ENST00000478954 RIOK3O14730 519 aaKnown RBP12.26□□□□□ -0.45
STRADBP1-201ENST00000478954 TRPC6Q9Y210 931 aa12.25□□□□□ -0.45
STRADBP1-201ENST00000478954 DCAF8L2P0C7V8 631 aa12.24□□□□□ -0.45
STRADBP1-201ENST00000478954 HAP1P54257 671 aaPredicted RBP12.24□□□□□ -0.45
STRADBP1-201ENST00000478954 SGIP1Q9BQI5 828 aa12.24□□□□□ -0.45
STRADBP1-201ENST00000478954 ZNF467Q7Z7K2 595 aaPredicted RBP12.23□□□□□ -0.45
STRADBP1-201ENST00000478954 POTEIP0CG38 1075 aa12.22□□□□□ -0.45
STRADBP1-201ENST00000478954 CLCN6P51797 869 aa12.2□□□□□ -0.46
STRADBP1-201ENST00000478954 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.18□□□□□ -0.46
STRADBP1-201ENST00000478954 VGFO15240 615 aaPredicted RBP12.18□□□□□ -0.46
STRADBP1-201ENST00000478954 ZFP91Q96JP5 570 aaPredicted RBP12.18□□□□□ -0.46
STRADBP1-201ENST00000478954 PSEN1P49768 467 aa12.14□□□□□ -0.47
STRADBP1-201ENST00000478954 PDAP1Q13442 181 aaKnown RBP12.14□□□□□ -0.47
STRADBP1-201ENST00000478954 CHGAP10645 457 aaKnown RBP12.12□□□□□ -0.47
STRADBP1-201ENST00000478954 PRKCSHP14314 528 aaPredicted RBP12.12□□□□□ -0.47
STRADBP1-201ENST00000478954 DCBLD2Q96PD2 775 aa12.12□□□□□ -0.47
STRADBP1-201ENST00000478954 BMP2KQ9NSY1 1161 aaPredicted RBP12.1□□□□□ -0.47
STRADBP1-201ENST00000478954 STK25O00506 426 aa12.09□□□□□ -0.47
STRADBP1-201ENST00000478954 HS6ST3Q8IZP7 471 aa12.09□□□□□ -0.47
STRADBP1-201ENST00000478954 BCANQ96GW7 911 aa12.09□□□□□ -0.47
STRADBP1-201ENST00000478954 BCL11BQ9C0K0 894 aaPredicted RBP12.09□□□□□ -0.47
STRADBP1-201ENST00000478954 TTLL13PA6NNM8 815 aa12.07□□□□□ -0.48
STRADBP1-201ENST00000478954 TIE1P35590 1138 aa12.07□□□□□ -0.48
STRADBP1-201ENST00000478954 TMEM106CQ9BVX2 250 aa12.07□□□□□ -0.48
STRADBP1-201ENST00000478954 TAOK2Q9UL54 1235 aa12.07□□□□□ -0.48
STRADBP1-201ENST00000478954 STK24Q9Y6E0 443 aa12.06□□□□□ -0.48
STRADBP1-201ENST00000478954 VSIG10Q8N0Z9 540 aa12.05□□□□□ -0.48
STRADBP1-201ENST00000478954 ATN1P54259 1190 aaPredicted RBP12.03□□□□□ -0.48
STRADBP1-201ENST00000478954 PELP1Q8IZL8 1130 aaKnown RBP12.03□□□□□ -0.48
STRADBP1-201ENST00000478954 ATMINO43313 823 aaPredicted RBP12.02□□□□□ -0.49
STRADBP1-201ENST00000478954 ASTLQ6HA08 431 aaPredicted RBP12.01□□□□□ -0.49
STRADBP1-201ENST00000478954 CABP2Q9NPB3 220 aa12.01□□□□□ -0.49
STRADBP1-201ENST00000478954 ABCC9O60706 1549 aa12.01□□□□□ -0.49
STRADBP1-201ENST00000478954 NKX1-1Q15270 411 aaPredicted RBP11.99□□□□□ -0.49
STRADBP1-201ENST00000478954 NISCHQ9Y2I1 1504 aa11.98□□□□□ -0.49
STRADBP1-201ENST00000478954 TRIM35Q9UPQ4 493 aa11.98□□□□□ -0.49
STRADBP1-201ENST00000478954 DNAJC5Q9H3Z4 198 aa11.97□□□□□ -0.49
STRADBP1-201ENST00000478954 KDM2AQ9Y2K7 1162 aa11.97□□□□□ -0.49
STRADBP1-201ENST00000478954 EFCAB3Q8N7B9 438 aa11.96□□□□□ -0.49
STRADBP1-201ENST00000478954 BBXQ8WY36 941 aaPredicted RBP11.94□□□□□ -0.5
STRADBP1-201ENST00000478954 MFRPQ9BY79 579 aa11.89□□□□□ -0.51
STRADBP1-201ENST00000478954 GOLGA2Q08379 1002 aa11.88□□□□□ -0.51
STRADBP1-201ENST00000478954 PHF8Q9UPP1 1060 aa11.88□□□□□ -0.51
STRADBP1-201ENST00000478954 LHX8Q68G74 356 aa11.87□□□□□ -0.51
STRADBP1-201ENST00000478954 PAXIP1Q6ZW49 1069 aaPredicted RBP11.87□□□□□ -0.51
STRADBP1-201ENST00000478954 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.87□□□□□ -0.51
STRADBP1-201ENST00000478954 MKRN3Q13064 507 aaKnown RBP11.86□□□□□ -0.51
STRADBP1-201ENST00000478954 POTEB2H3BUK9 544 aa11.85□□□□□ -0.51
STRADBP1-201ENST00000478954 FBXO22Q8NEZ5 403 aa11.85□□□□□ -0.51
STRADBP1-201ENST00000478954 METRNQ9UJH8 293 aa11.85□□□□□ -0.51
STRADBP1-201ENST00000478954 GTPBP6O43824 516 aaPredicted RBP11.84□□□□□ -0.51
STRADBP1-201ENST00000478954 IRX5P78411 483 aaPredicted RBP11.83□□□□□ -0.52
STRADBP1-201ENST00000478954 TPRNQ4KMQ1 711 aa11.83□□□□□ -0.52
STRADBP1-201ENST00000478954 SLC39A7Q92504 469 aa11.83□□□□□ -0.52
STRADBP1-201ENST00000478954 MS4A4AQ96JQ5 239 aa11.83□□□□□ -0.52
STRADBP1-201ENST00000478954 POTEFA5A3E0 1075 aa11.82□□□□□ -0.52
STRADBP1-201ENST00000478954 SOX12O15370 315 aa11.82□□□□□ -0.52
STRADBP1-201ENST00000478954 ILDR1Q86SU0 546 aaPredicted RBP11.82□□□□□ -0.52
STRADBP1-201ENST00000478954 CFAP44Q96MT7 982 aa11.82□□□□□ -0.52
STRADBP1-201ENST00000478954 C7P10643 843 aa11.8□□□□□ -0.52
STRADBP1-201ENST00000478954 IER5LQ5T953 404 aa11.8□□□□□ -0.52
STRADBP1-201ENST00000478954 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.8□□□□□ -0.52
STRADBP1-201ENST00000478954 COLQQ9Y215 455 aaPredicted RBP11.8□□□□□ -0.52
STRADBP1-201ENST00000478954 PDCD7Q8N8D1 485 aaKnown RBP11.79□□□□□ -0.52
STRADBP1-201ENST00000478954 NLRP6P59044 892 aa11.78□□□□□ -0.52
STRADBP1-201ENST00000478954 PPP1R37O75864 691 aa11.76□□□□□ -0.53
STRADBP1-201ENST00000478954 DPY19L2Q6NUT2 758 aa11.76□□□□□ -0.53
STRADBP1-201ENST00000478954 SPRYD3Q8NCJ5 442 aa11.76□□□□□ -0.53
STRADBP1-201ENST00000478954 POTEJP0CG39 1038 aa11.74□□□□□ -0.53
STRADBP1-201ENST00000478954 TSHZ2Q9NRE2 1034 aa11.74□□□□□ -0.53
STRADBP1-201ENST00000478954 OCEL1Q9H607 264 aa11.73□□□□□ -0.53
STRADBP1-201ENST00000478954 PLCG2P16885 1265 aa11.72□□□□□ -0.53
STRADBP1-201ENST00000478954 SEC24BO95487 1268 aa11.71□□□□□ -0.53
STRADBP1-201ENST00000478954 RYDENQ9NUL5 291 aaKnown RBP11.68□□□□□ -0.54
STRADBP1-201ENST00000478954 OTUD5Q96G74 571 aa11.67□□□□□ -0.54
STRADBP1-201ENST00000478954 MICALL2Q8IY33 904 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms