RNA–Protein interactions for RNA: ENST00000478954.1

STRADBP1-201, Transcript of STE20-related kinase adaptor beta pseudogene 1, humanhuman

BASIC

Gene STRADBP1, Length 1,281 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADBP1-201ENST00000478954 AEBP2Q6ZN18 517 aaPredicted RBP24.54■■□□□ 1.52
STRADBP1-201ENST00000478954 CHIC1Q5VXU3 224 aa23.82■■□□□ 1.4
STRADBP1-201ENST00000478954 PHF23Q9BUL5 403 aaPredicted RBP21.02■□□□□ 0.96
STRADBP1-201ENST00000478954 SENP3Q9H4L4 574 aaPredicted RBP20.73■□□□□ 0.91
STRADBP1-201ENST00000478954 FOXD1Q16676 465 aa19.38■□□□□ 0.69
STRADBP1-201ENST00000478954 PLPPR3Q6T4P5 718 aa19.3■□□□□ 0.68
STRADBP1-201ENST00000478954 PPP6R1Q9UPN7 881 aa18.55■□□□□ 0.56
STRADBP1-201ENST00000478954 ADRA2BP18089 450 aa18.5■□□□□ 0.55
STRADBP1-201ENST00000478954 PIAS4Q8N2W9 510 aaPredicted RBP18.15■□□□□ 0.5
STRADBP1-201ENST00000478954 MSH5O43196 834 aa17.88■□□□□ 0.45
STRADBP1-201ENST00000478954 PPP4R3CPQ6ZMV5 832 aa17.07■□□□□ 0.32
STRADBP1-201ENST00000478954 POTEDQ86YR6 584 aa16.94■□□□□ 0.3
STRADBP1-201ENST00000478954 MAPK8IP2Q13387 824 aaPredicted RBP16.82■□□□□ 0.28
STRADBP1-201ENST00000478954 KCNA4P22459 653 aa16.77■□□□□ 0.28
STRADBP1-201ENST00000478954 SCAF1Q9H7N4 1312 aaKnown RBP16.75■□□□□ 0.27
STRADBP1-201ENST00000478954 CNKSR2Q8WXI2 1034 aa16.54■□□□□ 0.24
STRADBP1-201ENST00000478954 DMRT2Q9Y5R5 561 aa16.54■□□□□ 0.24
STRADBP1-201ENST00000478954 NCBP3Q53F19 620 aaKnown RBP16.52■□□□□ 0.24
STRADBP1-201ENST00000478954 NPM3O75607 178 aaKnown RBP16.42■□□□□ 0.22
STRADBP1-201ENST00000478954 RNF216Q9NWF9 866 aaPredicted RBP16.21■□□□□ 0.19
STRADBP1-201ENST00000478954 HOXD11P31277 338 aaPredicted RBP16.16■□□□□ 0.18
STRADBP1-201ENST00000478954 SLC4A1APQ9BWU0 796 aaKnown RBP15.91■□□□□ 0.14
STRADBP1-201ENST00000478954 DCAF8L1A6NGE4 600 aa15.86■□□□□ 0.13
STRADBP1-201ENST00000478954 DNAJC5BQ9UF47 199 aa15.86■□□□□ 0.13
STRADBP1-201ENST00000478954 EHMT2Q96KQ7 1210 aa15.57■□□□□ 0.08
STRADBP1-201ENST00000478954 SLC4A2P04920 1241 aa15.52■□□□□ 0.08
STRADBP1-201ENST00000478954 ZBTB22O15209 634 aa15.48■□□□□ 0.07
STRADBP1-201ENST00000478954 CSRNP3Q8WYN3 585 aa15.38■□□□□ 0.05
STRADBP1-201ENST00000478954 FOXD4L1Q9NU39 408 aa15.36■□□□□ 0.05
STRADBP1-201ENST00000478954 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.35■□□□□ 0.05
STRADBP1-201ENST00000478954 RNF39Q9H2S5 420 aa15.35■□□□□ 0.05
STRADBP1-201ENST00000478954 U3KPZ7 1027 aaPredicted RBP15.21■□□□□ 0.03
STRADBP1-201ENST00000478954 CACNB1Q02641 598 aaPredicted RBP15.17■□□□□ 0.02
STRADBP1-201ENST00000478954 MYCNP04198 464 aaPredicted RBP15.11■□□□□ 0.01
STRADBP1-201ENST00000478954 C1QBPQ07021 282 aaKnown RBP15.1■□□□□ 0.01
STRADBP1-201ENST00000478954 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.85□□□□□ -0.03
STRADBP1-201ENST00000478954 HNRNPUL2Q1KMD3 747 aaKnown RBP14.85□□□□□ -0.03
STRADBP1-201ENST00000478954 SAMD1Q6SPF0 538 aaPredicted RBP14.84□□□□□ -0.03
STRADBP1-201ENST00000478954 ATF5Q9Y2D1 282 aaPredicted RBP14.82□□□□□ -0.04
STRADBP1-201ENST00000478954 SPINK5Q9NQ38 1064 aaPredicted RBP14.78□□□□□ -0.04
STRADBP1-201ENST00000478954 ATXN8OSP0DMR3 200 aa14.75□□□□□ -0.05
STRADBP1-201ENST00000478954 CAPN15O75808 1086 aa14.67□□□□□ -0.06
STRADBP1-201ENST00000478954 APLP2Q06481 763 aa14.66□□□□□ -0.06
STRADBP1-201ENST00000478954 TRHP20396 242 aaPredicted RBP14.6□□□□□ -0.07
STRADBP1-201ENST00000478954 ZNF219Q9P2Y4 722 aaPredicted RBP14.54□□□□□ -0.08
STRADBP1-201ENST00000478954 DSG3P32926 999 aa14.52□□□□□ -0.09
STRADBP1-201ENST00000478954 ABCB7O75027 752 aa14.43□□□□□ -0.1
STRADBP1-201ENST00000478954 POLA2Q14181 598 aa14.37□□□□□ -0.11
STRADBP1-201ENST00000478954 MKRN4PQ13434 485 aaPredicted RBP14.16□□□□□ -0.14
STRADBP1-201ENST00000478954 FBLN2P98095 1184 aa14.03□□□□□ -0.16
STRADBP1-201ENST00000478954 ZBTB12Q9Y330 459 aaPredicted RBP14.03□□□□□ -0.16
STRADBP1-201ENST00000478954 OSCARQ8IYS5 282 aa13.93□□□□□ -0.18
STRADBP1-201ENST00000478954 FKBP8Q14318 412 aa13.87□□□□□ -0.19
STRADBP1-201ENST00000478954 SPDYE4A6NLX3 237 aa13.78□□□□□ -0.2
STRADBP1-201ENST00000478954 RBM42Q9BTD8 480 aaKnown RBP13.74□□□□□ -0.21
STRADBP1-201ENST00000478954 SPDYE2BA6NHP3 402 aa13.71□□□□□ -0.21
STRADBP1-201ENST00000478954 SPDYE6P0CI01 402 aa13.71□□□□□ -0.21
STRADBP1-201ENST00000478954 SPDYE2Q495Y8 402 aa13.71□□□□□ -0.21
STRADBP1-201ENST00000478954 ZNF692Q9BU19 519 aaPredicted RBP13.68□□□□□ -0.22
STRADBP1-201ENST00000478954 SSUH2Q9Y2M2 353 aa13.67□□□□□ -0.22
STRADBP1-201ENST00000478954 PROM2Q8N271 834 aa13.59□□□□□ -0.23
STRADBP1-201ENST00000478954 RTN4Q9NQC3 1192 aaKnown RBP13.56□□□□□ -0.24
STRADBP1-201ENST00000478954 SLC24A1O60721 1099 aa13.54□□□□□ -0.24
STRADBP1-201ENST00000478954 PABPN1Q86U42 306 aaKnown RBP eCLIP13.54□□□□□ -0.24
STRADBP1-201ENST00000478954 AKT1S1Q96B36 256 aa13.54□□□□□ -0.24
STRADBP1-201ENST00000478954 REM2Q8IYK8 340 aaPredicted RBP13.47□□□□□ -0.25
STRADBP1-201ENST00000478954 AMER1Q5JTC6 1135 aaPredicted RBP13.44□□□□□ -0.26
STRADBP1-201ENST00000478954 CHRDL2Q6WN34 429 aa13.36□□□□□ -0.27
STRADBP1-201ENST00000478954 PITPNM1O00562 1244 aa13.32□□□□□ -0.28
STRADBP1-201ENST00000478954 POTEHQ6S545 545 aa13.32□□□□□ -0.28
STRADBP1-201ENST00000478954 SPDYE1Q8NFV5 336 aaPredicted RBP13.29□□□□□ -0.28
STRADBP1-201ENST00000478954 CLEC11AQ9Y240 323 aa13.27□□□□□ -0.29
STRADBP1-201ENST00000478954 FBXO3Q9UK99 471 aa13.24□□□□□ -0.29
STRADBP1-201ENST00000478954 STAG3Q9UJ98 1225 aa13.21□□□□□ -0.29
STRADBP1-201ENST00000478954 VASPP50552 380 aaPredicted RBP13.16□□□□□ -0.3
STRADBP1-201ENST00000478954 PIP4P2Q8N4L2 257 aa13.16□□□□□ -0.3
STRADBP1-201ENST00000478954 FXR2P51116 673 aaKnown RBP eCLIP13.13□□□□□ -0.31
STRADBP1-201ENST00000478954 PRR29P0C7W0 189 aa13.12□□□□□ -0.31
STRADBP1-201ENST00000478954 CREBZFQ9NS37 354 aa13.05□□□□□ -0.32
STRADBP1-201ENST00000478954 IFNLR1Q8IU57 520 aaPredicted RBP13.02□□□□□ -0.33
STRADBP1-201ENST00000478954 MIER1Q8N108 512 aa13.02□□□□□ -0.33
STRADBP1-201ENST00000478954 CHADLQ6NUI6 762 aa13.01□□□□□ -0.33
STRADBP1-201ENST00000478954 PLCD3Q8N3E9 789 aa13.01□□□□□ -0.33
STRADBP1-201ENST00000478954 PRKAR2AP13861 404 aaKnown RBP12.98□□□□□ -0.33
STRADBP1-201ENST00000478954 MNX1P50219 401 aaPredicted RBP12.93□□□□□ -0.34
STRADBP1-201ENST00000478954 KLHL34Q8N239 644 aa12.87□□□□□ -0.35
STRADBP1-201ENST00000478954 PLEKHG5O94827 1062 aa12.86□□□□□ -0.35
STRADBP1-201ENST00000478954 FARP1Q9Y4F1 1045 aaPredicted RBP12.83□□□□□ -0.36
STRADBP1-201ENST00000478954 HAX1O00165 279 aa12.8□□□□□ -0.36
STRADBP1-201ENST00000478954 SPOCK2Q92563 424 aa12.79□□□□□ -0.36
STRADBP1-201ENST00000478954 ZBTB47Q9UFB7 747 aaPredicted RBP12.79□□□□□ -0.36
STRADBP1-201ENST00000478954 EVX2Q03828 476 aa12.77□□□□□ -0.37
STRADBP1-201ENST00000478954 NUBP1P53384 320 aa12.76□□□□□ -0.37
STRADBP1-201ENST00000478954 NPM1P06748 294 aaKnown RBP eCLIP12.71□□□□□ -0.37
STRADBP1-201ENST00000478954 RASEFQ8IZ41 740 aa12.71□□□□□ -0.37
STRADBP1-201ENST00000478954 C19orf67A6NJJ6 358 aa12.68□□□□□ -0.38
STRADBP1-201ENST00000478954 SP7Q8TDD2 431 aaPredicted RBP12.64□□□□□ -0.39
STRADBP1-201ENST00000478954 PKD2Q13563 968 aa12.61□□□□□ -0.39
STRADBP1-201ENST00000478954 CIZ1Q9ULV3 898 aaPredicted RBP12.6□□□□□ -0.39
STRADBP1-201ENST00000478954 TSPYL2Q9H2G4 693 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms