RNA–Protein interactions for RNA: ENST00000472710.2

LRRC41-203, Transcript of leucine rich repeat containing 41, humanhuman

TSL 2

Gene LRRC41, Length 4,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC41-203ENST00000472710 TIMELESSQ9UNS1 1208 aa14.19□□□□□ -0.14
LRRC41-203ENST00000472710 NPM2Q86SE8 214 aaKnown RBP14.18□□□□□ -0.14
LRRC41-203ENST00000472710 CCER2I3L3R5 266 aa14.17□□□□□ -0.14
LRRC41-203ENST00000472710 NBR1Q14596 966 aa14.17□□□□□ -0.14
LRRC41-203ENST00000472710 RBM19Q9Y4C8 960 aaKnown RBP14.17□□□□□ -0.14
LRRC41-203ENST00000472710 DHX57Q6P158 1386 aaKnown RBP14.16□□□□□ -0.14
LRRC41-203ENST00000472710 ZBTB47Q9UFB7 747 aaPredicted RBP14.14□□□□□ -0.15
LRRC41-203ENST00000472710 SETD5Q9C0A6 1442 aa14.14□□□□□ -0.15
LRRC41-203ENST00000472710 RAB3GAP2Q9H2M9 1393 aa14.12□□□□□ -0.15
LRRC41-203ENST00000472710 RAPGEF2Q9Y4G8 1499 aa14.11□□□□□ -0.15
LRRC41-203ENST00000472710 TMC1Q8TDI8 760 aa14.11□□□□□ -0.15
LRRC41-203ENST00000472710 RRP7BPQ9NSQ0 103 aa14.11□□□□□ -0.15
LRRC41-203ENST00000472710 PPP4R2Q9NY27 417 aa14.11□□□□□ -0.15
LRRC41-203ENST00000472710 BCL11AQ9H165 835 aa14.11□□□□□ -0.15
LRRC41-203ENST00000472710 ZNF777Q9ULD5 760 aaPredicted RBP14.08□□□□□ -0.16
LRRC41-203ENST00000472710 FHAD1B1AJZ9 1412 aa14.07□□□□□ -0.16
LRRC41-203ENST00000472710 KCNH8Q96L42 1107 aa14.06□□□□□ -0.16
LRRC41-203ENST00000472710 SMARCA4P51532 1647 aa14.05□□□□□ -0.16
LRRC41-203ENST00000472710 SALL2Q9Y467 1007 aaPredicted RBP14.04□□□□□ -0.16
LRRC41-203ENST00000472710 PPP1R15AO75807 674 aaPredicted RBP14.02□□□□□ -0.16
LRRC41-203ENST00000472710 SLC4A1APQ9BWU0 796 aaKnown RBP14.02□□□□□ -0.16
LRRC41-203ENST00000472710 CARMIL1Q5VZK9 1371 aa14.02□□□□□ -0.16
LRRC41-203ENST00000472710 SMARCA2P51531 1590 aa14.02□□□□□ -0.17
LRRC41-203ENST00000472710 B4GALNT3Q6L9W6 998 aa14□□□□□ -0.17
LRRC41-203ENST00000472710 CUX2O14529 1486 aa14□□□□□ -0.17
LRRC41-203ENST00000472710 ERICH6BQ5W0A0 696 aa13.98□□□□□ -0.17
LRRC41-203ENST00000472710 NOP58Q9Y2X3 529 aaKnown RBP13.97□□□□□ -0.17
LRRC41-203ENST00000472710 FBLN2P98095 1184 aa13.97□□□□□ -0.17
LRRC41-203ENST00000472710 CANXP27824 592 aaKnown RBP13.96□□□□□ -0.17
LRRC41-203ENST00000472710 ARHGAP35Q9NRY4 1499 aa13.96□□□□□ -0.17
LRRC41-203ENST00000472710 HSPA5P11021 654 aaKnown RBP13.94□□□□□ -0.18
LRRC41-203ENST00000472710 EIF5BO60841 1220 aaKnown RBP13.94□□□□□ -0.18
LRRC41-203ENST00000472710 KDM2AQ9Y2K7 1162 aa13.93□□□□□ -0.18
LRRC41-203ENST00000472710 KIF21BO75037 1637 aa13.92□□□□□ -0.18
LRRC41-203ENST00000472710 SENP3-EIF4A1A0A087X0R7 540 aa13.92□□□□□ -0.18
LRRC41-203ENST00000472710 DEKP35659 375 aaKnown RBP13.89□□□□□ -0.19
LRRC41-203ENST00000472710 ATAD2BQ9ULI0 1458 aa13.88□□□□□ -0.19
LRRC41-203ENST00000472710 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.87□□□□□ -0.19
LRRC41-203ENST00000472710 TSPY4P0CV99 314 aa13.86□□□□□ -0.19
LRRC41-203ENST00000472710 TSPY10P0CW01 314 aa13.86□□□□□ -0.19
LRRC41-203ENST00000472710 DDRGK1Q96HY6 314 aa13.86□□□□□ -0.19
LRRC41-203ENST00000472710 WDR43Q15061 677 aaKnown RBP eCLIP13.83□□□□□ -0.2
LRRC41-203ENST00000472710 PPM1GO15355 546 aaPredicted RBP13.83□□□□□ -0.2
LRRC41-203ENST00000472710 CARD11Q9BXL7 1154 aa13.83□□□□□ -0.2
LRRC41-203ENST00000472710 GLIPR1L2Q4G1C9 344 aa13.82□□□□□ -0.2
LRRC41-203ENST00000472710 UPF2Q9HAU5 1272 aaKnown RBP13.81□□□□□ -0.2
LRRC41-203ENST00000472710 RRBP1Q9P2E9 1410 aaKnown RBP13.8□□□□□ -0.2
LRRC41-203ENST00000472710 FMN1Q68DA7 1419 aa13.8□□□□□ -0.2
LRRC41-203ENST00000472710 LAS1LQ9Y4W2 734 aaKnown RBP13.8□□□□□ -0.2
LRRC41-203ENST00000472710 FANCIQ9NVI1 1328 aa13.8□□□□□ -0.2
LRRC41-203ENST00000472710 NEFMP07197 916 aa13.8□□□□□ -0.2
LRRC41-203ENST00000472710 CFDP1Q9UEE9 299 aaPredicted RBP13.79□□□□□ -0.2
LRRC41-203ENST00000472710 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.78□□□□□ -0.25e-8■■□□□ 12.8
LRRC41-203ENST00000472710 MPHOSPH9Q99550 1183 aa13.78□□□□□ -0.2
LRRC41-203ENST00000472710 FHOD3Q2V2M9 1422 aa13.78□□□□□ -0.2
LRRC41-203ENST00000472710 FOXD1Q16676 465 aa13.78□□□□□ -0.2
LRRC41-203ENST00000472710 SYNJ1O43426 1573 aa13.77□□□□□ -0.2
LRRC41-203ENST00000472710 L3MBTL2Q969R5 705 aa13.76□□□□□ -0.21
LRRC41-203ENST00000472710 ARAP1Q96P48 1450 aa13.75□□□□□ -0.21
LRRC41-203ENST00000472710 NUDCQ9Y266 331 aa13.73□□□□□ -0.21
LRRC41-203ENST00000472710 ERICH3Q5RHP9 1530 aa13.73□□□□□ -0.21
LRRC41-203ENST00000472710 PHLDB1Q86UU1 1377 aa13.72□□□□□ -0.21
LRRC41-203ENST00000472710 RGL3Q3MIN7 710 aa13.72□□□□□ -0.21
LRRC41-203ENST00000472710 IPO9Q96P70 1041 aaKnown RBP13.72□□□□□ -0.21
LRRC41-203ENST00000472710 PRKRIP1Q9H875 184 aaPredicted RBP13.72□□□□□ -0.21
LRRC41-203ENST00000472710 RTN4Q9NQC3 1192 aaKnown RBP13.72□□□□□ -0.21
LRRC41-203ENST00000472710 CCDC18Q5T9S5 1454 aa13.71□□□□□ -0.21
LRRC41-203ENST00000472710 ZBED9Q6R2W3 1325 aa13.7□□□□□ -0.22
LRRC41-203ENST00000472710 PLEKHD1A6NEE1 506 aa13.7□□□□□ -0.22
LRRC41-203ENST00000472710 IGF1RP08069 1367 aa13.7□□□□□ -0.22
LRRC41-203ENST00000472710 LRRC9Q6ZRR7 1453 aa13.69□□□□□ -0.22
LRRC41-203ENST00000472710 PRXQ9BXM0 1461 aa13.69□□□□□ -0.22
LRRC41-203ENST00000472710 TCERG1O14776 1098 aaKnown RBP13.68□□□□□ -0.22
LRRC41-203ENST00000472710 BECN1Q14457 450 aa13.68□□□□□ -0.22
LRRC41-203ENST00000472710 CHMP7Q8WUX9 453 aaPredicted RBP13.68□□□□□ -0.22
LRRC41-203ENST00000472710 EIF4G1Q04637 1599 aaKnown RBP13.68□□□□□ -0.22
LRRC41-203ENST00000472710 RCAN3Q9UKA8 241 aa13.67□□□□□ -0.22
LRRC41-203ENST00000472710 ARXQ96QS3 562 aa13.66□□□□□ -0.22
LRRC41-203ENST00000472710 CADPSQ9ULU8 1353 aa13.66□□□□□ -0.22
LRRC41-203ENST00000472710 KNSTRNQ9Y448 316 aa13.66□□□□□ -0.22
LRRC41-203ENST00000472710 DCAF11Q8TEB1 546 aa13.66□□□□□ -0.22
LRRC41-203ENST00000472710 HSP90AA1P07900 732 aaKnown RBP13.66□□□□□ -0.22
LRRC41-203ENST00000472710 PKD2Q13563 968 aa13.65□□□□□ -0.22
LRRC41-203ENST00000472710 CC2D1BQ5T0F9 858 aaKnown RBP13.65□□□□□ -0.22
LRRC41-203ENST00000472710 RGS3P49796 1198 aa13.64□□□□□ -0.23
LRRC41-203ENST00000472710 UACAQ9BZF9 1416 aa13.64□□□□□ -0.23
LRRC41-203ENST00000472710 RALBP1Q15311 655 aa13.63□□□□□ -0.23
LRRC41-203ENST00000472710 FGD6Q6ZV73 1430 aa13.63□□□□□ -0.23
LRRC41-203ENST00000472710 ANP32BQ92688 251 aaKnown RBP13.62□□□□□ -0.23
LRRC41-203ENST00000472710 TDRD9Q8NDG6 1382 aaKnown RBP13.62□□□□□ -0.23
LRRC41-203ENST00000472710 CDCA8Q53HL2 280 aa13.62□□□□□ -0.23
LRRC41-203ENST00000472710 KTN1Q86UP2 1357 aaKnown RBP13.6□□□□□ -0.23
LRRC41-203ENST00000472710 CHGAP10645 457 aaKnown RBP13.6□□□□□ -0.23
LRRC41-203ENST00000472710 WASHC2AQ641Q2 1341 aa13.6□□□□□ -0.23
LRRC41-203ENST00000472710 WDR97A6NE52 1622 aa13.6□□□□□ -0.23
LRRC41-203ENST00000472710 TOP2BQ02880 1626 aa13.6□□□□□ -0.23
LRRC41-203ENST00000472710 PRKCSHP14314 528 aaPredicted RBP13.6□□□□□ -0.23
LRRC41-203ENST00000472710 ROCK2O75116 1388 aaKnown RBP13.58□□□□□ -0.24
LRRC41-203ENST00000472710 CNTLNQ9NXG0 1405 aa13.58□□□□□ -0.24
LRRC41-203ENST00000472710 CCDC7Q96M83 1385 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms