RNA–Protein interactions for RNA: ENST00000472710.2

LRRC41-203, Transcript of leucine rich repeat containing 41, humanhuman

TSL 2

Gene LRRC41, Length 4,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC41-203ENST00000472710 NISCHQ9Y2I1 1504 aa18.67■□□□□ 0.58
LRRC41-203ENST00000472710 SUPT5HO00267 1087 aaKnown RBP17.48■□□□□ 0.39
LRRC41-203ENST00000472710 DCAF8L2P0C7V8 631 aa17.48■□□□□ 0.39
LRRC41-203ENST00000472710 SHROOM4Q9ULL8 1493 aa17.32■□□□□ 0.36
LRRC41-203ENST00000472710 PCGF6Q9BYE7 350 aa16.8■□□□□ 0.28
LRRC41-203ENST00000472710 HRCP23327 699 aa16.53■□□□□ 0.24
LRRC41-203ENST00000472710 EHMT2Q96KQ7 1210 aa16.45■□□□□ 0.22
LRRC41-203ENST00000472710 ZEB1P37275 1124 aaPredicted RBP16.37■□□□□ 0.21
LRRC41-203ENST00000472710 CHIC1Q5VXU3 224 aa16.35■□□□□ 0.21
LRRC41-203ENST00000472710 FAM9AQ8IZU1 332 aaPredicted RBP16.32■□□□□ 0.2
LRRC41-203ENST00000472710 PELP1Q8IZL8 1130 aaKnown RBP16.25■□□□□ 0.19
LRRC41-203ENST00000472710 TRIM26Q12899 539 aaPredicted RBP16.21■□□□□ 0.19
LRRC41-203ENST00000472710 TRIM41Q8WV44 630 aa16.2■□□□□ 0.18
LRRC41-203ENST00000472710 PPARGC1BQ86YN6 1023 aaKnown RBP16.15■□□□□ 0.18
LRRC41-203ENST00000472710 LOC105371045A0A1W2PR82 267 aa16.12■□□□□ 0.17
LRRC41-203ENST00000472710 CENPBP07199 599 aaPredicted RBP16.06■□□□□ 0.16
LRRC41-203ENST00000472710 MYT1Q01538 1121 aa16.06■□□□□ 0.16
LRRC41-203ENST00000472710 CCER1Q8TC90 406 aaPredicted RBP16.05■□□□□ 0.16
LRRC41-203ENST00000472710 TTBK1Q5TCY1 1321 aaPredicted RBP15.98■□□□□ 0.15
LRRC41-203ENST00000472710 APLP2Q06481 763 aa15.9■□□□□ 0.14
LRRC41-203ENST00000472710 UBTFP17480 764 aaKnown RBP15.7■□□□□ 0.1
LRRC41-203ENST00000472710 YTHDC1Q96MU7 727 aaKnown RBP15.68■□□□□ 0.1
LRRC41-203ENST00000472710 ZCCHC6Q5VYS8 1495 aaKnown RBP15.66■□□□□ 0.1
LRRC41-203ENST00000472710 DCAF1Q9Y4B6 1507 aa15.65■□□□□ 0.1
LRRC41-203ENST00000472710 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.6■□□□□ 0.09
LRRC41-203ENST00000472710 MYO15BQ96JP2 1530 aa15.59■□□□□ 0.09
LRRC41-203ENST00000472710 RANGAP1P46060 587 aaPredicted RBP15.57■□□□□ 0.08
LRRC41-203ENST00000472710 DIEXFQ68CQ4 756 aaKnown RBP15.55■□□□□ 0.08
LRRC41-203ENST00000472710 GTF3C3Q9Y5Q9 886 aa15.41■□□□□ 0.06
LRRC41-203ENST00000472710 HNRNPUL2Q1KMD3 747 aaKnown RBP15.39■□□□□ 0.05
LRRC41-203ENST00000472710 ACIN1Q9UKV3 1341 aaKnown RBP15.39■□□□□ 0.05
LRRC41-203ENST00000472710 CCDC180Q9P1Z9 1646 aa15.31■□□□□ 0.04
LRRC41-203ENST00000472710 NEFLP07196 543 aa15.29■□□□□ 0.04
LRRC41-203ENST00000472710 SCAF1Q9H7N4 1312 aaKnown RBP15.27■□□□□ 0.04
LRRC41-203ENST00000472710 ERICH6Q7L0X2 663 aa15.25■□□□□ 0.03
LRRC41-203ENST00000472710 ZNF316A6NFI3 1004 aaPredicted RBP15.24■□□□□ 0.03
LRRC41-203ENST00000472710 ATP1B4Q9UN42 357 aaPredicted RBP15.19■□□□□ 0.02
LRRC41-203ENST00000472710 NEUROD1Q13562 356 aa15.17■□□□□ 0.02
LRRC41-203ENST00000472710 ITGAEP38570 1179 aa15.14■□□□□ 0.01
LRRC41-203ENST00000472710 CSRNP3Q8WYN3 585 aa15.07■□□□□ 0
LRRC41-203ENST00000472710 SCRIBQ14160 1630 aa15.07■□□□□ 0
LRRC41-203ENST00000472710 ABCC9O60706 1549 aa15.06■□□□□ 0
LRRC41-203ENST00000472710 RSF1Q96T23 1441 aaPredicted RBP15.04■□□□□ -0
LRRC41-203ENST00000472710 CLSPNQ9HAW4 1339 aa14.88□□□□□ -0.03
LRRC41-203ENST00000472710 BCANQ96GW7 911 aa14.88□□□□□ -0.03
LRRC41-203ENST00000472710 MIER1Q8N108 512 aa14.86□□□□□ -0.03
LRRC41-203ENST00000472710 PABPN1Q86U42 306 aaKnown RBP eCLIP14.85□□□□□ -0.03
LRRC41-203ENST00000472710 FAM50AQ14320 339 aaKnown RBP14.82□□□□□ -0.04
LRRC41-203ENST00000472710 RB1CC1Q8TDY2 1594 aa14.81□□□□□ -0.04
LRRC41-203ENST00000472710 CEP162Q5TB80 1403 aa14.8□□□□□ -0.04
LRRC41-203ENST00000472710 ANP32CO43423 234 aa14.76□□□□□ -0.05
LRRC41-203ENST00000472710 EEA1Q15075 1411 aa14.72□□□□□ -0.05
LRRC41-203ENST00000472710 TNIKQ9UKE5 1360 aa14.71□□□□□ -0.05
LRRC41-203ENST00000472710 CLIP1P30622 1438 aa14.68□□□□□ -0.06
LRRC41-203ENST00000472710 SLC24A1O60721 1099 aa14.68□□□□□ -0.06
LRRC41-203ENST00000472710 GOLGA3Q08378 1498 aa14.66□□□□□ -0.06
LRRC41-203ENST00000472710 FKBP8Q14318 412 aa14.66□□□□□ -0.06
LRRC41-203ENST00000472710 POLR3GLQ9BT43 218 aa14.65□□□□□ -0.06
LRRC41-203ENST00000472710 CDK11AQ9UQ88 783 aaPredicted RBP14.65□□□□□ -0.06
LRRC41-203ENST00000472710 CECR2Q9BXF3 1484 aa14.64□□□□□ -0.07
LRRC41-203ENST00000472710 CNGB1Q14028 1251 aaPredicted RBP14.61□□□□□ -0.07
LRRC41-203ENST00000472710 DDX10Q13206 875 aaKnown RBP14.6□□□□□ -0.07
LRRC41-203ENST00000472710 TRIM52Q96A61 297 aa14.56□□□□□ -0.08
LRRC41-203ENST00000472710 NACADO15069 1562 aa14.55□□□□□ -0.08
LRRC41-203ENST00000472710 RTL5Q5HYW3 569 aaPredicted RBP14.55□□□□□ -0.08
LRRC41-203ENST00000472710 WRNQ14191 1432 aaPredicted RBP eCLIP14.53□□□□□ -0.08
LRRC41-203ENST00000472710 SOGA1O94964 1423 aa14.52□□□□□ -0.08
LRRC41-203ENST00000472710 MROH2BQ7Z745 1585 aa14.52□□□□□ -0.09
LRRC41-203ENST00000472710 CEP164Q9UPV0 1460 aa14.52□□□□□ -0.09
LRRC41-203ENST00000472710 P3H3Q8IVL6 736 aa14.51□□□□□ -0.09
LRRC41-203ENST00000472710 BAZ1AQ9NRL2 1556 aaPredicted RBP14.5□□□□□ -0.09
LRRC41-203ENST00000472710 DAXXQ9UER7 740 aaPredicted RBP14.5□□□□□ -0.09
LRRC41-203ENST00000472710 SUPT16HQ9Y5B9 1047 aaKnown RBP14.48□□□□□ -0.09
LRRC41-203ENST00000472710 TONSLQ96HA7 1378 aa14.47□□□□□ -0.09
LRRC41-203ENST00000472710 HNRNPUQ00839 825 aaKnown RBP eCLIP14.45□□□□□ -0.1
LRRC41-203ENST00000472710 CCDC88BA6NC98 1476 aa14.44□□□□□ -0.1
LRRC41-203ENST00000472710 ANP32EQ9BTT0 268 aa14.44□□□□□ -0.1
LRRC41-203ENST00000472710 ABCC8Q09428 1581 aa14.41□□□□□ -0.1
LRRC41-203ENST00000472710 HIRIP3Q9BW71 556 aaPredicted RBP14.38□□□□□ -0.11
LRRC41-203ENST00000472710 VPS8Q8N3P4 1428 aa14.38□□□□□ -0.11
LRRC41-203ENST00000472710 WIZO95785 1651 aa14.34□□□□□ -0.11
LRRC41-203ENST00000472710 ZNF326Q5BKZ1 582 aaKnown RBP14.34□□□□□ -0.11
LRRC41-203ENST00000472710 ANP32AP39687 249 aaKnown RBP14.33□□□□□ -0.12
LRRC41-203ENST00000472710 MYT1LQ9UL68 1186 aa14.31□□□□□ -0.12
LRRC41-203ENST00000472710 FAM9BQ8IZU0 186 aa14.31□□□□□ -0.12
LRRC41-203ENST00000472710 IRX6P78412 446 aaPredicted RBP14.29□□□□□ -0.12
LRRC41-203ENST00000472710 CCNB3Q8WWL7 1395 aa14.29□□□□□ -0.12
LRRC41-203ENST00000472710 SIN3AQ96ST3 1273 aa14.26□□□□□ -0.13
LRRC41-203ENST00000472710 KIF27Q86VH2 1401 aa14.25□□□□□ -0.13
LRRC41-203ENST00000472710 TOP2AP11388 1531 aaKnown RBP14.25□□□□□ -0.13
LRRC41-203ENST00000472710 BAZ1BQ9UIG0 1483 aaKnown RBP14.25□□□□□ -0.13
LRRC41-203ENST00000472710 MRS2Q9HD23 443 aa14.23□□□□□ -0.13
LRRC41-203ENST00000472710 TSHZ2Q9NRE2 1034 aa14.23□□□□□ -0.13
LRRC41-203ENST00000472710 KANK4Q5T7N3 995 aaPredicted RBP14.23□□□□□ -0.13
LRRC41-203ENST00000472710 MTUS2Q5JR59 1369 aa14.21□□□□□ -0.13
LRRC41-203ENST00000472710 ARID3CA6NKF2 412 aa14.21□□□□□ -0.14
LRRC41-203ENST00000472710 CHIC2Q9UKJ5 165 aa14.2□□□□□ -0.14
LRRC41-203ENST00000472710 EIF4G2P78344 907 aaKnown RBP eCLIP14.2□□□□□ -0.14
LRRC41-203ENST00000472710 RUSC2Q8N2Y8 1516 aa14.19□□□□□ -0.14
LRRC41-203ENST00000472710 CCDC136Q96JN2 1154 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms