RNA–Protein interactions for RNA: ENST00000471440.6

CFHR3-205, Transcript of complement factor H related 3, humanhuman

TSL 1 (best) BASIC

Gene CFHR3, Length 1,965 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-205ENST00000471440 GALR2O43603 387 aaPredicted RBP9.77□□□□□ -0.84
CFHR3-205ENST00000471440 NPM1P06748 294 aaKnown RBP eCLIP9.75□□□□□ -0.85
CFHR3-205ENST00000471440 PLEKHG5O94827 1062 aa9.75□□□□□ -0.85
CFHR3-205ENST00000471440 POTEMA6NI47 508 aa9.74□□□□□ -0.85
CFHR3-205ENST00000471440 NISCHQ9Y2I1 1504 aa9.74□□□□□ -0.85
CFHR3-205ENST00000471440 IFNLR1Q8IU57 520 aaPredicted RBP9.72□□□□□ -0.85
CFHR3-205ENST00000471440 POTEGQ6S5H5 508 aa9.7□□□□□ -0.86
CFHR3-205ENST00000471440 MAMSTRQ6ZN01 415 aa9.7□□□□□ -0.86
CFHR3-205ENST00000471440 POTEB2H3BUK9 544 aa9.68□□□□□ -0.86
CFHR3-205ENST00000471440 MNX1P50219 401 aaPredicted RBP9.68□□□□□ -0.86
CFHR3-205ENST00000471440 KLHL34Q8N239 644 aa9.68□□□□□ -0.86
CFHR3-205ENST00000471440 ZBTB47Q9UFB7 747 aaPredicted RBP9.67□□□□□ -0.86
CFHR3-205ENST00000471440 C7P10643 843 aa9.66□□□□□ -0.86
CFHR3-205ENST00000471440 SLC39A7Q92504 469 aa9.66□□□□□ -0.86
CFHR3-205ENST00000471440 PHF12Q96QT6 1004 aa9.65□□□□□ -0.86
CFHR3-205ENST00000471440 ASTLQ6HA08 431 aaPredicted RBP9.62□□□□□ -0.87
CFHR3-205ENST00000471440 METRNQ9UJH8 293 aa9.61□□□□□ -0.87
CFHR3-205ENST00000471440 PELP1Q8IZL8 1130 aaKnown RBP9.6□□□□□ -0.87
CFHR3-205ENST00000471440 SPOCK2Q92563 424 aa9.59□□□□□ -0.87
CFHR3-205ENST00000471440 ATMINO43313 823 aaPredicted RBP9.57□□□□□ -0.88
CFHR3-205ENST00000471440 SCUBE2Q9NQ36 999 aa9.56□□□□□ -0.88
CFHR3-205ENST00000471440 NUBP1P53384 320 aa9.55□□□□□ -0.88
CFHR3-205ENST00000471440 RASEFQ8IZ41 740 aa9.54□□□□□ -0.88
CFHR3-205ENST00000471440 MS4A3Q96HJ5 214 aa9.54□□□□□ -0.88
CFHR3-205ENST00000471440 FAM212AQ96EL1 285 aa9.49□□□□□ -0.89
CFHR3-205ENST00000471440 FAM163AQ96GL9 167 aaPredicted RBP9.49□□□□□ -0.89
CFHR3-205ENST00000471440 TSPYL2Q9H2G4 693 aaPredicted RBP9.48□□□□□ -0.89
CFHR3-205ENST00000471440 POTEJP0CG39 1038 aa9.47□□□□□ -0.89
CFHR3-205ENST00000471440 PRKCSHP14314 528 aaPredicted RBP9.47□□□□□ -0.89
CFHR3-205ENST00000471440 CIZ1Q9ULV3 898 aaPredicted RBP9.46□□□□□ -0.89
CFHR3-205ENST00000471440 DCAF8Q5TAQ9 597 aa9.45□□□□□ -0.9
CFHR3-205ENST00000471440 PLCB2Q00722 1185 aa9.44□□□□□ -0.9
CFHR3-205ENST00000471440 GSE1Q14687 1217 aa9.43□□□□□ -0.9
CFHR3-205ENST00000471440 ATN1P54259 1190 aaPredicted RBP9.42□□□□□ -0.9
CFHR3-205ENST00000471440 CCDC61Q9Y6R9 512 aa9.41□□□□□ -0.9
CFHR3-205ENST00000471440 LCE2DQ5TA82 110 aaPredicted RBP9.4□□□□□ -0.9
CFHR3-205ENST00000471440 TIE1P35590 1138 aa9.39□□□□□ -0.91
CFHR3-205ENST00000471440 PKD2Q13563 968 aa9.39□□□□□ -0.91
CFHR3-205ENST00000471440 KIF12Q96FN5 646 aa9.39□□□□□ -0.91
CFHR3-205ENST00000471440 PYGBP11216 843 aa9.36□□□□□ -0.91
CFHR3-205ENST00000471440 BMP2KQ9NSY1 1161 aaPredicted RBP9.35□□□□□ -0.91
CFHR3-205ENST00000471440 SEC24BO95487 1268 aa9.33□□□□□ -0.92
CFHR3-205ENST00000471440 ECM2O94769 699 aaPredicted RBP9.33□□□□□ -0.92
CFHR3-205ENST00000471440 TRIM41Q8WV44 630 aa9.32□□□□□ -0.92
CFHR3-205ENST00000471440 POTEFA5A3E0 1075 aa9.32□□□□□ -0.92
CFHR3-205ENST00000471440 IER5LQ5T953 404 aa9.32□□□□□ -0.92
CFHR3-205ENST00000471440 CDAN1Q8IWY9 1227 aa9.32□□□□□ -0.92
CFHR3-205ENST00000471440 SGIP1Q9BQI5 828 aa9.3□□□□□ -0.92
CFHR3-205ENST00000471440 MAP3K13O43283 966 aa9.29□□□□□ -0.92
CFHR3-205ENST00000471440 CHRM1P11229 460 aaPredicted RBP9.28□□□□□ -0.92
CFHR3-205ENST00000471440 TAOK2Q9UL54 1235 aa9.28□□□□□ -0.92
CFHR3-205ENST00000471440 PCDHB13Q9Y5F0 798 aa9.27□□□□□ -0.93
CFHR3-205ENST00000471440 HAP1P54257 671 aaPredicted RBP9.26□□□□□ -0.93
CFHR3-205ENST00000471440 RNF25Q96BH1 459 aaPredicted RBP9.26□□□□□ -0.93
CFHR3-205ENST00000471440 RGL2O15211 777 aa9.26□□□□□ -0.93
CFHR3-205ENST00000471440 TTLL13PA6NNM8 815 aa9.25□□□□□ -0.93
CFHR3-205ENST00000471440 BCANQ96GW7 911 aa9.24□□□□□ -0.93
CFHR3-205ENST00000471440 IFNL1Q8IU54 200 aa9.23□□□□□ -0.93
CFHR3-205ENST00000471440 TRPC6Q9Y210 931 aa9.23□□□□□ -0.93
CFHR3-205ENST00000471440 PCDHB8Q9UN66 801 aa9.23□□□□□ -0.93
CFHR3-205ENST00000471440 COLQQ9Y215 455 aaPredicted RBP9.23□□□□□ -0.93
CFHR3-205ENST00000471440 ZNF467Q7Z7K2 595 aaPredicted RBP9.22□□□□□ -0.93
CFHR3-205ENST00000471440 RIOK3O14730 519 aaKnown RBP9.21□□□□□ -0.94
CFHR3-205ENST00000471440 SLAIN1Q8ND83 568 aa9.21□□□□□ -0.94
CFHR3-205ENST00000471440 TRIM35Q9UPQ4 493 aa9.19□□□□□ -0.94
CFHR3-205ENST00000471440 SNPHO15079 494 aa9.17□□□□□ -0.94
CFHR3-205ENST00000471440 ST18O60284 1047 aa9.17□□□□□ -0.94
CFHR3-205ENST00000471440 DCAF8L2P0C7V8 631 aa9.17□□□□□ -0.94
CFHR3-205ENST00000471440 TMEM121BQ9BXQ6 578 aaPredicted RBP9.17□□□□□ -0.94
CFHR3-205ENST00000471440 PLCG2P16885 1265 aa9.15□□□□□ -0.94
CFHR3-205ENST00000471440 VGFO15240 615 aaPredicted RBP9.14□□□□□ -0.95
CFHR3-205ENST00000471440 PDAP1Q13442 181 aaKnown RBP9.13□□□□□ -0.95
CFHR3-205ENST00000471440 TPRNQ4KMQ1 711 aa9.13□□□□□ -0.95
CFHR3-205ENST00000471440 KDM2AQ9Y2K7 1162 aa9.13□□□□□ -0.95
CFHR3-205ENST00000471440 PSEN1P49768 467 aa9.12□□□□□ -0.95
CFHR3-205ENST00000471440 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.12□□□□□ -0.95
CFHR3-205ENST00000471440 ZFP91Q96JP5 570 aaPredicted RBP9.12□□□□□ -0.95
CFHR3-205ENST00000471440 MMRN1Q13201 1228 aa9.11□□□□□ -0.95
CFHR3-205ENST00000471440 VSIG10Q8N0Z9 540 aa9.1□□□□□ -0.95
CFHR3-205ENST00000471440 TMEM106CQ9BVX2 250 aa9.1□□□□□ -0.95
CFHR3-205ENST00000471440 SPNS2Q8IVW8 549 aa9.09□□□□□ -0.95
CFHR3-205ENST00000471440 STK25O00506 426 aa9.08□□□□□ -0.96
CFHR3-205ENST00000471440 BCL11BQ9C0K0 894 aaPredicted RBP9.07□□□□□ -0.96
CFHR3-205ENST00000471440 CHGAP10645 457 aaKnown RBP9.06□□□□□ -0.96
CFHR3-205ENST00000471440 OCEL1Q9H607 264 aa9.06□□□□□ -0.96
CFHR3-205ENST00000471440 IRX5P78411 483 aaPredicted RBP9.06□□□□□ -0.96
CFHR3-205ENST00000471440 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.06□□□□□ -0.96
CFHR3-205ENST00000471440 STK24Q9Y6E0 443 aa9.05□□□□□ -0.96
CFHR3-205ENST00000471440 HS6ST3Q8IZP7 471 aa9.04□□□□□ -0.96
CFHR3-205ENST00000471440 CABP2Q9NPB3 220 aa9.03□□□□□ -0.96
CFHR3-205ENST00000471440 GOLGA2Q08379 1002 aa8.99□□□□□ -0.97
CFHR3-205ENST00000471440 TIMELESSQ9UNS1 1208 aa8.97□□□□□ -0.97
CFHR3-205ENST00000471440 EFCAB3Q8N7B9 438 aa8.97□□□□□ -0.97
CFHR3-205ENST00000471440 MKRN3Q13064 507 aaKnown RBP8.95□□□□□ -0.98
CFHR3-205ENST00000471440 L3MBTL3Q96JM7 780 aaPredicted RBP8.95□□□□□ -0.98
CFHR3-205ENST00000471440 NKX1-1Q15270 411 aaPredicted RBP8.93□□□□□ -0.98
CFHR3-205ENST00000471440 MARVELD3Q96A59 401 aa8.92□□□□□ -0.98
CFHR3-205ENST00000471440 DNAJC5Q9H3Z4 198 aa8.92□□□□□ -0.98
CFHR3-205ENST00000471440 EMP3P54852 163 aa8.91□□□□□ -0.98
CFHR3-205ENST00000471440 C3orf67Q6ZVT6 689 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms