RNA–Protein interactions for RNA: ENST00000470668.5

HDAC7-219, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 4,266 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-219ENST00000470668 SIN3AQ96ST3 1273 aa19.12■□□□□ 0.65
HDAC7-219ENST00000470668 WRNQ14191 1432 aaPredicted RBP eCLIP19.1■□□□□ 0.65
HDAC7-219ENST00000470668 NACADO15069 1562 aa19.09■□□□□ 0.65
HDAC7-219ENST00000470668 KCNH8Q96L42 1107 aa19.08■□□□□ 0.65
HDAC7-219ENST00000470668 CHIC2Q9UKJ5 165 aa19.08■□□□□ 0.65
HDAC7-219ENST00000470668 ZNF777Q9ULD5 760 aaPredicted RBP19.08■□□□□ 0.65
HDAC7-219ENST00000470668 ABCC8Q09428 1581 aa19.03■□□□□ 0.64
HDAC7-219ENST00000470668 GOLGA3Q08378 1498 aa19■□□□□ 0.63
HDAC7-219ENST00000470668 EIF4G2P78344 907 aaKnown RBP eCLIP18.99■□□□□ 0.633e-7■■■■□ 21.1
HDAC7-219ENST00000470668 TNIKQ9UKE5 1360 aa18.98■□□□□ 0.63
HDAC7-219ENST00000470668 CCDC88BA6NC98 1476 aa18.97■□□□□ 0.63
HDAC7-219ENST00000470668 PPM1GO15355 546 aaPredicted RBP18.97■□□□□ 0.63
HDAC7-219ENST00000470668 HSP90AA1P07900 732 aaKnown RBP18.96■□□□□ 0.63
HDAC7-219ENST00000470668 UPF2Q9HAU5 1272 aaKnown RBP18.96■□□□□ 0.63
HDAC7-219ENST00000470668 ANP32BQ92688 251 aaKnown RBP18.96■□□□□ 0.63
HDAC7-219ENST00000470668 BAZ1AQ9NRL2 1556 aaPredicted RBP18.96■□□□□ 0.63
HDAC7-219ENST00000470668 BAZ1BQ9UIG0 1483 aaKnown RBP18.93■□□□□ 0.62
HDAC7-219ENST00000470668 ERICH6BQ5W0A0 696 aa18.92■□□□□ 0.62
HDAC7-219ENST00000470668 DDRGK1Q96HY6 314 aa18.91■□□□□ 0.62
HDAC7-219ENST00000470668 WIZO95785 1651 aa18.89■□□□□ 0.61
HDAC7-219ENST00000470668 EEA1Q15075 1411 aa18.88■□□□□ 0.61
HDAC7-219ENST00000470668 NAP1L5Q96NT1 182 aaPredicted RBP18.88■□□□□ 0.61
HDAC7-219ENST00000470668 CCER2I3L3R5 266 aa18.85■□□□□ 0.61
HDAC7-219ENST00000470668 RRP7BPQ9NSQ0 103 aa18.85■□□□□ 0.61
HDAC7-219ENST00000470668 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.82■□□□□ 0.6
HDAC7-219ENST00000470668 MTUS2Q5JR59 1369 aa18.81■□□□□ 0.6
HDAC7-219ENST00000470668 KDM2AQ9Y2K7 1162 aa18.81■□□□□ 0.6
HDAC7-219ENST00000470668 CEP164Q9UPV0 1460 aa18.81■□□□□ 0.6
HDAC7-219ENST00000470668 RGS3P49796 1198 aa18.8■□□□□ 0.6
HDAC7-219ENST00000470668 KANK4Q5T7N3 995 aaPredicted RBP18.79■□□□□ 0.6
HDAC7-219ENST00000470668 TRIM44Q96DX7 344 aaPredicted RBP18.78■□□□□ 0.6
HDAC7-219ENST00000470668 ARID4BQ4LE39 1312 aaPredicted RBP18.75■□□□□ 0.59
HDAC7-219ENST00000470668 RUSC2Q8N2Y8 1516 aa18.75■□□□□ 0.59
HDAC7-219ENST00000470668 KIF27Q86VH2 1401 aa18.73■□□□□ 0.59
HDAC7-219ENST00000470668 BECN1Q14457 450 aa18.73■□□□□ 0.59
HDAC7-219ENST00000470668 IPO9Q96P70 1041 aaKnown RBP18.73■□□□□ 0.59
HDAC7-219ENST00000470668 WDR43Q15061 677 aaKnown RBP eCLIP18.71■□□□□ 0.593e-9■■■■□ 20.2
HDAC7-219ENST00000470668 ANO8Q9HCE9 1232 aaPredicted RBP18.71■□□□□ 0.59
HDAC7-219ENST00000470668 CCNB3Q8WWL7 1395 aa18.67■□□□□ 0.58
HDAC7-219ENST00000470668 FANCIQ9NVI1 1328 aa18.67■□□□□ 0.58
HDAC7-219ENST00000470668 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.66■□□□□ 0.58
HDAC7-219ENST00000470668 PRKCSHP14314 528 aaPredicted RBP18.65■□□□□ 0.58
HDAC7-219ENST00000470668 CUX2O14529 1486 aa18.6■□□□□ 0.57
HDAC7-219ENST00000470668 HSPA5P11021 654 aaKnown RBP18.6■□□□□ 0.57
HDAC7-219ENST00000470668 VPS8Q8N3P4 1428 aa18.59■□□□□ 0.57
HDAC7-219ENST00000470668 CHMP7Q8WUX9 453 aaPredicted RBP18.59■□□□□ 0.57
HDAC7-219ENST00000470668 NCLP19338 710 aaKnown RBP18.56■□□□□ 0.56
HDAC7-219ENST00000470668 CARMIL1Q5VZK9 1371 aa18.56■□□□□ 0.56
HDAC7-219ENST00000470668 SPRYD3Q8NCJ5 442 aa18.56■□□□□ 0.56
HDAC7-219ENST00000470668 PPP1R15AO75807 674 aaPredicted RBP18.55■□□□□ 0.56
HDAC7-219ENST00000470668 DHX57Q6P158 1386 aaKnown RBP18.55■□□□□ 0.56
HDAC7-219ENST00000470668 RAB3GAP2Q9H2M9 1393 aa18.55■□□□□ 0.56
HDAC7-219ENST00000470668 TIMELESSQ9UNS1 1208 aa18.54■□□□□ 0.56
HDAC7-219ENST00000470668 SLKQ9H2G2 1235 aaPredicted RBP18.53■□□□□ 0.56
HDAC7-219ENST00000470668 SLC4A3P48751 1232 aa18.53■□□□□ 0.56
HDAC7-219ENST00000470668 GZF1Q9H116 711 aaPredicted RBP18.53■□□□□ 0.56
HDAC7-219ENST00000470668 SLC24A1O60721 1099 aa18.53■□□□□ 0.56
HDAC7-219ENST00000470668 TOP2AP11388 1531 aaKnown RBP18.53■□□□□ 0.56
HDAC7-219ENST00000470668 RAPGEF2Q9Y4G8 1499 aa18.52■□□□□ 0.56
HDAC7-219ENST00000470668 SENP3Q9H4L4 574 aaPredicted RBP18.52■□□□□ 0.56
HDAC7-219ENST00000470668 PNNQ9H307 717 aaKnown RBP18.52■□□□□ 0.55
HDAC7-219ENST00000470668 CHGAP10645 457 aaKnown RBP18.51■□□□□ 0.55
HDAC7-219ENST00000470668 IL27Q8NEV9 243 aa18.51■□□□□ 0.55
HDAC7-219ENST00000470668 TCERG1O14776 1098 aaKnown RBP18.5■□□□□ 0.55
HDAC7-219ENST00000470668 RGL3Q3MIN7 710 aa18.49■□□□□ 0.55
HDAC7-219ENST00000470668 TSPY4P0CV99 314 aa18.49■□□□□ 0.55
HDAC7-219ENST00000470668 TSPY10P0CW01 314 aa18.49■□□□□ 0.55
HDAC7-219ENST00000470668 CARD11Q9BXL7 1154 aa18.49■□□□□ 0.55
HDAC7-219ENST00000470668 ARID3AQ99856 593 aa18.48■□□□□ 0.55
HDAC7-219ENST00000470668 SETD5Q9C0A6 1442 aa18.47■□□□□ 0.55
HDAC7-219ENST00000470668 VSIG10Q8N0Z9 540 aa18.47■□□□□ 0.55
HDAC7-219ENST00000470668 NEUROD2Q15784 382 aa18.46■□□□□ 0.55
HDAC7-219ENST00000470668 DNTTIP2Q5QJE6 756 aaKnown RBP18.46■□□□□ 0.55
HDAC7-219ENST00000470668 GOLGA6L22H0YM25 854 aa18.46■□□□□ 0.54
HDAC7-219ENST00000470668 L1TD1Q5T7N2 865 aaKnown RBP18.45■□□□□ 0.54
HDAC7-219ENST00000470668 FRAT1Q92837 279 aaPredicted RBP18.45■□□□□ 0.54
HDAC7-219ENST00000470668 RCAN3Q9UKA8 241 aa18.45■□□□□ 0.54
HDAC7-219ENST00000470668 FOXD1Q16676 465 aa18.45■□□□□ 0.54
HDAC7-219ENST00000470668 PAK3O75914 559 aaPredicted RBP18.44■□□□□ 0.54
HDAC7-219ENST00000470668 CC2D1BQ5T0F9 858 aaKnown RBP18.44■□□□□ 0.54
HDAC7-219ENST00000470668 NUDCQ9Y266 331 aa18.44■□□□□ 0.54
HDAC7-219ENST00000470668 MSH5O43196 834 aa18.43■□□□□ 0.54
HDAC7-219ENST00000470668 PTMAP06454 111 aaKnown RBP18.43■□□□□ 0.54
HDAC7-219ENST00000470668 TNNT2P45379 298 aaPredicted RBP18.43■□□□□ 0.54
HDAC7-219ENST00000470668 GSE1Q14687 1217 aa18.43■□□□□ 0.54
HDAC7-219ENST00000470668 TPRNQ4KMQ1 711 aa18.43■□□□□ 0.54
HDAC7-219ENST00000470668 TDRD9Q8NDG6 1382 aaKnown RBP18.42■□□□□ 0.54
HDAC7-219ENST00000470668 PDE4AP27815 886 aa18.41■□□□□ 0.54
HDAC7-219ENST00000470668 USP35Q9P2H5 1018 aa18.41■□□□□ 0.54
HDAC7-219ENST00000470668 SMARCA4P51532 1647 aa18.41■□□□□ 0.54
HDAC7-219ENST00000470668 CFDP1Q9UEE9 299 aaPredicted RBP18.4■□□□□ 0.54
HDAC7-219ENST00000470668 ATAD2BQ9ULI0 1458 aa18.39■□□□□ 0.53
HDAC7-219ENST00000470668 HSP90AA2PQ14568 343 aaPredicted RBP18.35■□□□□ 0.53
HDAC7-219ENST00000470668 ZBTB7CA1YPR0 619 aa18.35■□□□□ 0.53
HDAC7-219ENST00000470668 PLEKHD1A6NEE1 506 aa18.35■□□□□ 0.53
HDAC7-219ENST00000470668 RSPH6AQ9H0K4 717 aa18.34■□□□□ 0.53
HDAC7-219ENST00000470668 BRPF3Q9ULD4 1205 aa18.34■□□□□ 0.53
HDAC7-219ENST00000470668 AMER1Q5JTC6 1135 aaPredicted RBP18.33■□□□□ 0.53
HDAC7-219ENST00000470668 KNSTRNQ9Y448 316 aa18.33■□□□□ 0.52
HDAC7-219ENST00000470668 EXOC6Q8TAG9 804 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms