RNA–Protein interactions for RNA: ENST00000467742.1

TRIM27-204, Transcript of tripartite motif containing 27, humanhuman

TSL 2

Gene TRIM27, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-204ENST00000467742 DCAF1Q9Y4B6 1507 aa10.02□□□□□ -0.81
TRIM27-204ENST00000467742 ZRANB1Q9UGI0 708 aa10.01□□□□□ -0.81
TRIM27-204ENST00000467742 MYO15BQ96JP2 1530 aa10.01□□□□□ -0.81
TRIM27-204ENST00000467742 GABBR2O75899 941 aa9.96□□□□□ -0.82
TRIM27-204ENST00000467742 LHX8Q68G74 356 aa9.92□□□□□ -0.82
TRIM27-204ENST00000467742 NUBP1P53384 320 aa9.91□□□□□ -0.82
TRIM27-204ENST00000467742 RASEFQ8IZ41 740 aa9.91□□□□□ -0.82
TRIM27-204ENST00000467742 TSPYL2Q9H2G4 693 aaPredicted RBP9.9□□□□□ -0.82
TRIM27-204ENST00000467742 CCDC61Q9Y6R9 512 aa9.9□□□□□ -0.82
TRIM27-204ENST00000467742 SCRIBQ14160 1630 aa9.89□□□□□ -0.83
TRIM27-204ENST00000467742 PHF12Q96QT6 1004 aa9.88□□□□□ -0.83
TRIM27-204ENST00000467742 DCAF8L2P0C7V8 631 aa9.87□□□□□ -0.83
TRIM27-204ENST00000467742 FAM212AQ96EL1 285 aa9.87□□□□□ -0.83
TRIM27-204ENST00000467742 BICRAQ9NZM4 1560 aa9.87□□□□□ -0.83
TRIM27-204ENST00000467742 KLHL34Q8N239 644 aa9.86□□□□□ -0.83
TRIM27-204ENST00000467742 GALR2O43603 387 aaPredicted RBP9.83□□□□□ -0.84
TRIM27-204ENST00000467742 IFNLR1Q8IU57 520 aaPredicted RBP9.83□□□□□ -0.84
TRIM27-204ENST00000467742 PLSCR2Q9NRY7 297 aa9.82□□□□□ -0.84
TRIM27-204ENST00000467742 AMER1Q5JTC6 1135 aaPredicted RBP9.81□□□□□ -0.84
TRIM27-204ENST00000467742 KIF12Q96FN5 646 aa9.8□□□□□ -0.84
TRIM27-204ENST00000467742 SPOCK2Q92563 424 aa9.78□□□□□ -0.84
TRIM27-204ENST00000467742 MS4A3Q96HJ5 214 aa9.78□□□□□ -0.84
TRIM27-204ENST00000467742 DCBLD2Q96PD2 775 aa9.78□□□□□ -0.84
TRIM27-204ENST00000467742 GSE1Q14687 1217 aa9.77□□□□□ -0.85
TRIM27-204ENST00000467742 SGIP1Q9BQI5 828 aa9.77□□□□□ -0.85
TRIM27-204ENST00000467742 DCAF8Q5TAQ9 597 aa9.76□□□□□ -0.85
TRIM27-204ENST00000467742 MAP3K13O43283 966 aa9.74□□□□□ -0.85
TRIM27-204ENST00000467742 POTEIP0CG38 1075 aa9.74□□□□□ -0.85
TRIM27-204ENST00000467742 PCDHB13Q9Y5F0 798 aa9.7□□□□□ -0.86
TRIM27-204ENST00000467742 ASTLQ6HA08 431 aaPredicted RBP9.69□□□□□ -0.86
TRIM27-204ENST00000467742 PYGBP11216 843 aa9.67□□□□□ -0.86
TRIM27-204ENST00000467742 TIE1P35590 1138 aa9.67□□□□□ -0.86
TRIM27-204ENST00000467742 RTN4Q9NQC3 1192 aaKnown RBP9.67□□□□□ -0.86
TRIM27-204ENST00000467742 CHRM1P11229 460 aaPredicted RBP9.66□□□□□ -0.86
TRIM27-204ENST00000467742 ATMINO43313 823 aaPredicted RBP9.65□□□□□ -0.86
TRIM27-204ENST00000467742 SHROOM4Q9ULL8 1493 aa9.65□□□□□ -0.87
TRIM27-204ENST00000467742 IFNL1Q8IU54 200 aa9.64□□□□□ -0.87
TRIM27-204ENST00000467742 TRIM41Q8WV44 630 aa9.63□□□□□ -0.87
TRIM27-204ENST00000467742 CIZ1Q9ULV3 898 aaPredicted RBP9.63□□□□□ -0.87
TRIM27-204ENST00000467742 BMP2KQ9NSY1 1161 aaPredicted RBP9.62□□□□□ -0.87
TRIM27-204ENST00000467742 TRPC6Q9Y210 931 aa9.62□□□□□ -0.87
TRIM27-204ENST00000467742 ZNF467Q7Z7K2 595 aaPredicted RBP9.61□□□□□ -0.87
TRIM27-204ENST00000467742 TTLL13PA6NNM8 815 aa9.59□□□□□ -0.87
TRIM27-204ENST00000467742 ATN1P54259 1190 aaPredicted RBP9.59□□□□□ -0.87
TRIM27-204ENST00000467742 SLC39A7Q92504 469 aa9.59□□□□□ -0.87
TRIM27-204ENST00000467742 PELP1Q8IZL8 1130 aaKnown RBP9.58□□□□□ -0.88
TRIM27-204ENST00000467742 C7P10643 843 aa9.56□□□□□ -0.88
TRIM27-204ENST00000467742 EIF4G1Q04637 1599 aaKnown RBP9.55□□□□□ -0.88
TRIM27-204ENST00000467742 METRNQ9UJH8 293 aa9.55□□□□□ -0.88
TRIM27-204ENST00000467742 PCDHB8Q9UN66 801 aa9.55□□□□□ -0.88
TRIM27-204ENST00000467742 TMEM106CQ9BVX2 250 aa9.54□□□□□ -0.88
TRIM27-204ENST00000467742 TRIM35Q9UPQ4 493 aa9.52□□□□□ -0.89
TRIM27-204ENST00000467742 IER5LQ5T953 404 aa9.51□□□□□ -0.89
TRIM27-204ENST00000467742 CC2D2AQ9P2K1 1620 aa9.5□□□□□ -0.89
TRIM27-204ENST00000467742 PDAP1Q13442 181 aaKnown RBP9.48□□□□□ -0.89
TRIM27-204ENST00000467742 PSEN1P49768 467 aa9.46□□□□□ -0.9
TRIM27-204ENST00000467742 SMARCA4P51532 1647 aa9.45□□□□□ -0.9
TRIM27-204ENST00000467742 CECR2Q9BXF3 1484 aa9.43□□□□□ -0.9
TRIM27-204ENST00000467742 RIOK3O14730 519 aaKnown RBP9.43□□□□□ -0.9
TRIM27-204ENST00000467742 PKD2Q13563 968 aa9.43□□□□□ -0.9
TRIM27-204ENST00000467742 RNF25Q96BH1 459 aaPredicted RBP9.43□□□□□ -0.9
TRIM27-204ENST00000467742 POTEFA5A3E0 1075 aa9.42□□□□□ -0.9
TRIM27-204ENST00000467742 POTEB2H3BUK9 544 aa9.42□□□□□ -0.9
TRIM27-204ENST00000467742 SEC24BO95487 1268 aa9.42□□□□□ -0.9
TRIM27-204ENST00000467742 GOLGA2Q08379 1002 aa9.41□□□□□ -0.9
TRIM27-204ENST00000467742 ECM2O94769 699 aaPredicted RBP9.4□□□□□ -0.9
TRIM27-204ENST00000467742 IRX5P78411 483 aaPredicted RBP9.4□□□□□ -0.9
TRIM27-204ENST00000467742 TAOK2Q9UL54 1235 aa9.4□□□□□ -0.9
TRIM27-204ENST00000467742 POTEMA6NI47 508 aa9.39□□□□□ -0.91
TRIM27-204ENST00000467742 VGFO15240 615 aaPredicted RBP9.39□□□□□ -0.91
TRIM27-204ENST00000467742 COLQQ9Y215 455 aaPredicted RBP9.39□□□□□ -0.91
TRIM27-204ENST00000467742 PLCG2P16885 1265 aa9.38□□□□□ -0.91
TRIM27-204ENST00000467742 MKRN3Q13064 507 aaKnown RBP9.38□□□□□ -0.91
TRIM27-204ENST00000467742 BAZ1AQ9NRL2 1556 aaPredicted RBP9.37□□□□□ -0.91
TRIM27-204ENST00000467742 MAMSTRQ6ZN01 415 aa9.37□□□□□ -0.91
TRIM27-204ENST00000467742 MROH2BQ7Z745 1585 aa9.37□□□□□ -0.91
TRIM27-204ENST00000467742 OTUD5Q96G74 571 aa9.36□□□□□ -0.91
TRIM27-204ENST00000467742 OCEL1Q9H607 264 aa9.35□□□□□ -0.91
TRIM27-204ENST00000467742 CABP2Q9NPB3 220 aa9.35□□□□□ -0.91
TRIM27-204ENST00000467742 POTEGQ6S5H5 508 aa9.34□□□□□ -0.91
TRIM27-204ENST00000467742 PEG3Q9GZU2 1588 aa9.33□□□□□ -0.92
TRIM27-204ENST00000467742 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.33□□□□□ -0.92
TRIM27-204ENST00000467742 POTEJP0CG39 1038 aa9.33□□□□□ -0.92
TRIM27-204ENST00000467742 ZFP91Q96JP5 570 aaPredicted RBP9.33□□□□□ -0.92
TRIM27-204ENST00000467742 SCUBE2Q9NQ36 999 aa9.33□□□□□ -0.92
TRIM27-204ENST00000467742 WIZO95785 1651 aa9.32□□□□□ -0.92
TRIM27-204ENST00000467742 ILDR1Q86SU0 546 aaPredicted RBP9.31□□□□□ -0.92
TRIM27-204ENST00000467742 PDCD7Q8N8D1 485 aaKnown RBP9.31□□□□□ -0.92
TRIM27-204ENST00000467742 DNAJC5Q9H3Z4 198 aa9.31□□□□□ -0.92
TRIM27-204ENST00000467742 RGL2O15211 777 aa9.3□□□□□ -0.92
TRIM27-204ENST00000467742 HMGXB3Q12766 1538 aa9.3□□□□□ -0.92
TRIM27-204ENST00000467742 SMARCA2P51531 1590 aa9.29□□□□□ -0.92
TRIM27-204ENST00000467742 ATAD2BQ9ULI0 1458 aa9.29□□□□□ -0.92
TRIM27-204ENST00000467742 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.29□□□□□ -0.92
TRIM27-204ENST00000467742 PCDH10Q9P2E7 1040 aa9.28□□□□□ -0.92
TRIM27-204ENST00000467742 EFCAB3Q8N7B9 438 aa9.26□□□□□ -0.93
TRIM27-204ENST00000467742 SOX12O15370 315 aa9.25□□□□□ -0.93
TRIM27-204ENST00000467742 BCL11BQ9C0K0 894 aaPredicted RBP9.25□□□□□ -0.93
TRIM27-204ENST00000467742 L3MBTL3Q96JM7 780 aaPredicted RBP9.24□□□□□ -0.93
TRIM27-204ENST00000467742 NCAPD3P42695 1498 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms