RNA–Protein interactions for RNA: ENST00000467742.1

TRIM27-204, Transcript of tripartite motif containing 27, humanhuman

TSL 2

Gene TRIM27, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-204ENST00000467742 AEBP2Q6ZN18 517 aaPredicted RBP19.64■□□□□ 0.73
TRIM27-204ENST00000467742 CHIC1Q5VXU3 224 aa18.99■□□□□ 0.63
TRIM27-204ENST00000467742 SENP3Q9H4L4 574 aaPredicted RBP16.78■□□□□ 0.28
TRIM27-204ENST00000467742 PHF23Q9BUL5 403 aaPredicted RBP16.61■□□□□ 0.25
TRIM27-204ENST00000467742 FOXD1Q16676 465 aa15.54■□□□□ 0.08
TRIM27-204ENST00000467742 PLPPR3Q6T4P5 718 aa15.33■□□□□ 0.04
TRIM27-204ENST00000467742 POTEDQ86YR6 584 aa15.06■□□□□ 0
TRIM27-204ENST00000467742 PPP6R1Q9UPN7 881 aa14.72□□□□□ -0.05
TRIM27-204ENST00000467742 ADRA2BP18089 450 aa14.68□□□□□ -0.06
TRIM27-204ENST00000467742 PIAS4Q8N2W9 510 aaPredicted RBP14.62□□□□□ -0.07
TRIM27-204ENST00000467742 MSH5O43196 834 aa14.51□□□□□ -0.09
TRIM27-204ENST00000467742 SCAF1Q9H7N4 1312 aaKnown RBP13.53□□□□□ -0.24
TRIM27-204ENST00000467742 PPP4R3CPQ6ZMV5 832 aa13.43□□□□□ -0.26
TRIM27-204ENST00000467742 MAPK8IP2Q13387 824 aaPredicted RBP13.37□□□□□ -0.27
TRIM27-204ENST00000467742 DMRT2Q9Y5R5 561 aa13.35□□□□□ -0.27
TRIM27-204ENST00000467742 CNKSR2Q8WXI2 1034 aa13.15□□□□□ -0.3
TRIM27-204ENST00000467742 NCBP3Q53F19 620 aaKnown RBP13.04□□□□□ -0.32
TRIM27-204ENST00000467742 HOXD11P31277 338 aaPredicted RBP12.98□□□□□ -0.33
TRIM27-204ENST00000467742 RNF216Q9NWF9 866 aaPredicted RBP12.96□□□□□ -0.33
TRIM27-204ENST00000467742 NPM3O75607 178 aaKnown RBP12.82□□□□□ -0.36
TRIM27-204ENST00000467742 KCNA4P22459 653 aa12.81□□□□□ -0.36
TRIM27-204ENST00000467742 DCAF8L1A6NGE4 600 aa12.7□□□□□ -0.38
TRIM27-204ENST00000467742 CACNB1Q02641 598 aaPredicted RBP12.59□□□□□ -0.39
TRIM27-204ENST00000467742 DNAJC5BQ9UF47 199 aa12.59□□□□□ -0.39
TRIM27-204ENST00000467742 RNF39Q9H2S5 420 aa12.37□□□□□ -0.43
TRIM27-204ENST00000467742 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.32□□□□□ -0.44
TRIM27-204ENST00000467742 C1QBPQ07021 282 aaKnown RBP12.23□□□□□ -0.45
TRIM27-204ENST00000467742 SLC4A1APQ9BWU0 796 aaKnown RBP12.17□□□□□ -0.46
TRIM27-204ENST00000467742 SLC4A2P04920 1241 aa12.15□□□□□ -0.46
TRIM27-204ENST00000467742 U3KPZ7 1027 aaPredicted RBP12.11□□□□□ -0.47
TRIM27-204ENST00000467742 NISCHQ9Y2I1 1504 aa12.11□□□□□ -0.47
TRIM27-204ENST00000467742 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.93□□□□□ -0.5
TRIM27-204ENST00000467742 HNRNPUL2Q1KMD3 747 aaKnown RBP11.93□□□□□ -0.5
TRIM27-204ENST00000467742 FOXD4L1Q9NU39 408 aa11.92□□□□□ -0.5
TRIM27-204ENST00000467742 MYCNP04198 464 aaPredicted RBP11.9□□□□□ -0.5
TRIM27-204ENST00000467742 APLP2Q06481 763 aa11.89□□□□□ -0.51
TRIM27-204ENST00000467742 SAMD1Q6SPF0 538 aaPredicted RBP11.86□□□□□ -0.51
TRIM27-204ENST00000467742 SPINK5Q9NQ38 1064 aaPredicted RBP11.8□□□□□ -0.52
TRIM27-204ENST00000467742 CAPN15O75808 1086 aa11.78□□□□□ -0.52
TRIM27-204ENST00000467742 ZBTB22O15209 634 aa11.77□□□□□ -0.53
TRIM27-204ENST00000467742 ZNF219Q9P2Y4 722 aaPredicted RBP11.73□□□□□ -0.53
TRIM27-204ENST00000467742 DSG3P32926 999 aa11.67□□□□□ -0.54
TRIM27-204ENST00000467742 POTEHQ6S545 545 aa11.66□□□□□ -0.54
TRIM27-204ENST00000467742 EHMT2Q96KQ7 1210 aa11.66□□□□□ -0.54
TRIM27-204ENST00000467742 TRHP20396 242 aaPredicted RBP11.65□□□□□ -0.54
TRIM27-204ENST00000467742 ATXN8OSP0DMR3 200 aa11.56□□□□□ -0.56
TRIM27-204ENST00000467742 ABCB7O75027 752 aa11.51□□□□□ -0.57
TRIM27-204ENST00000467742 ATF5Q9Y2D1 282 aaPredicted RBP11.51□□□□□ -0.57
TRIM27-204ENST00000467742 CSRNP3Q8WYN3 585 aa11.5□□□□□ -0.57
TRIM27-204ENST00000467742 POLA2Q14181 598 aa11.42□□□□□ -0.58
TRIM27-204ENST00000467742 ZBTB12Q9Y330 459 aaPredicted RBP11.31□□□□□ -0.6
TRIM27-204ENST00000467742 RBM42Q9BTD8 480 aaKnown RBP11.19□□□□□ -0.62
TRIM27-204ENST00000467742 FBLN2P98095 1184 aa11.12□□□□□ -0.63
TRIM27-204ENST00000467742 OSCARQ8IYS5 282 aa11.06□□□□□ -0.64
TRIM27-204ENST00000467742 MKRN4PQ13434 485 aaPredicted RBP11.02□□□□□ -0.65
TRIM27-204ENST00000467742 AKT1S1Q96B36 256 aa10.97□□□□□ -0.65
TRIM27-204ENST00000467742 SPDYE2BA6NHP3 402 aa10.95□□□□□ -0.66
TRIM27-204ENST00000467742 SPDYE6P0CI01 402 aa10.95□□□□□ -0.66
TRIM27-204ENST00000467742 SPDYE2Q495Y8 402 aa10.95□□□□□ -0.66
TRIM27-204ENST00000467742 CCDC180Q9P1Z9 1646 aa10.85□□□□□ -0.67
TRIM27-204ENST00000467742 SSUH2Q9Y2M2 353 aa10.84□□□□□ -0.67
TRIM27-204ENST00000467742 REM2Q8IYK8 340 aaPredicted RBP10.82□□□□□ -0.68
TRIM27-204ENST00000467742 ZNF692Q9BU19 519 aaPredicted RBP10.82□□□□□ -0.68
TRIM27-204ENST00000467742 CHRDL2Q6WN34 429 aa10.77□□□□□ -0.69
TRIM27-204ENST00000467742 PITPNM1O00562 1244 aa10.71□□□□□ -0.69
TRIM27-204ENST00000467742 SPDYE1Q8NFV5 336 aaPredicted RBP10.68□□□□□ -0.7
TRIM27-204ENST00000467742 SPDYE4A6NLX3 237 aa10.67□□□□□ -0.7
TRIM27-204ENST00000467742 PABPN1Q86U42 306 aaKnown RBP eCLIP10.67□□□□□ -0.7
TRIM27-204ENST00000467742 SP7Q8TDD2 431 aaPredicted RBP10.62□□□□□ -0.71
TRIM27-204ENST00000467742 FXR2P51116 673 aaKnown RBP eCLIP10.58□□□□□ -0.72
TRIM27-204ENST00000467742 CLEC11AQ9Y240 323 aa10.58□□□□□ -0.72
TRIM27-204ENST00000467742 PIP4P2Q8N4L2 257 aa10.57□□□□□ -0.72
TRIM27-204ENST00000467742 PROM2Q8N271 834 aa10.51□□□□□ -0.73
TRIM27-204ENST00000467742 STAG3Q9UJ98 1225 aa10.49□□□□□ -0.73
TRIM27-204ENST00000467742 PRR29P0C7W0 189 aa10.48□□□□□ -0.73
TRIM27-204ENST00000467742 ABCC9O60706 1549 aa10.43□□□□□ -0.74
TRIM27-204ENST00000467742 PRKAR2AP13861 404 aaKnown RBP10.43□□□□□ -0.74
TRIM27-204ENST00000467742 FKBP8Q14318 412 aa10.42□□□□□ -0.74
TRIM27-204ENST00000467742 CHADLQ6NUI6 762 aa10.33□□□□□ -0.76
TRIM27-204ENST00000467742 CREBZFQ9NS37 354 aa10.29□□□□□ -0.76
TRIM27-204ENST00000467742 HAX1O00165 279 aa10.27□□□□□ -0.77
TRIM27-204ENST00000467742 FARP1Q9Y4F1 1045 aaPredicted RBP10.26□□□□□ -0.77
TRIM27-204ENST00000467742 C19orf67A6NJJ6 358 aa10.22□□□□□ -0.77
TRIM27-204ENST00000467742 FBXO3Q9UK99 471 aa10.19□□□□□ -0.78
TRIM27-204ENST00000467742 PLEKHG5O94827 1062 aa10.16□□□□□ -0.78
TRIM27-204ENST00000467742 MNX1P50219 401 aaPredicted RBP10.16□□□□□ -0.78
TRIM27-204ENST00000467742 NPM1P06748 294 aaKnown RBP eCLIP10.15□□□□□ -0.78
TRIM27-204ENST00000467742 ZCCHC6Q5VYS8 1495 aaKnown RBP10.14□□□□□ -0.79
TRIM27-204ENST00000467742 CD44P16070 742 aaKnown RBP10.13□□□□□ -0.79
TRIM27-204ENST00000467742 EVX2Q03828 476 aa10.13□□□□□ -0.79
TRIM27-204ENST00000467742 MIER1Q8N108 512 aa10.11□□□□□ -0.79
TRIM27-204ENST00000467742 PLCD3Q8N3E9 789 aa10.09□□□□□ -0.79
TRIM27-204ENST00000467742 UNC13AQ9UPW8 1703 aa10.08□□□□□ -0.8
TRIM27-204ENST00000467742 ZBTB47Q9UFB7 747 aaPredicted RBP10.08□□□□□ -0.8
TRIM27-204ENST00000467742 RB1CC1Q8TDY2 1594 aa10.08□□□□□ -0.8
TRIM27-204ENST00000467742 NACADO15069 1562 aa10.06□□□□□ -0.8
TRIM27-204ENST00000467742 PAK3O75914 559 aaPredicted RBP10.05□□□□□ -0.8
TRIM27-204ENST00000467742 CLCN6P51797 869 aa10.04□□□□□ -0.8
TRIM27-204ENST00000467742 VASPP50552 380 aaPredicted RBP10.02□□□□□ -0.81
TRIM27-204ENST00000467742 ZNF579Q8NAF0 562 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms