RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 CHGAP10645 457 aaKnown RBP12.15□□□□□ -0.46
GAPVD1-211ENST00000467707 RASEFQ8IZ41 740 aa12.15□□□□□ -0.46
GAPVD1-211ENST00000467707 RIOK3O14730 519 aaKnown RBP12.14□□□□□ -0.47
GAPVD1-211ENST00000467707 HS6ST3Q8IZP7 471 aa12.13□□□□□ -0.47
GAPVD1-211ENST00000467707 RNF25Q96BH1 459 aaPredicted RBP12.11□□□□□ -0.47
GAPVD1-211ENST00000467707 PAXIP1Q6ZW49 1069 aaPredicted RBP12.1□□□□□ -0.47
GAPVD1-211ENST00000467707 SPRYD3Q8NCJ5 442 aa12.1□□□□□ -0.47
GAPVD1-211ENST00000467707 VSIG10Q8N0Z9 540 aa12.09□□□□□ -0.47
GAPVD1-211ENST00000467707 DNAJC5Q9H3Z4 198 aa12.09□□□□□ -0.47
GAPVD1-211ENST00000467707 FARP1Q9Y4F1 1045 aaPredicted RBP12.09□□□□□ -0.47
GAPVD1-211ENST00000467707 VGFO15240 615 aaPredicted RBP12.07□□□□□ -0.48
GAPVD1-211ENST00000467707 FXR2P51116 673 aaKnown RBP eCLIP12.06□□□□□ -0.48
GAPVD1-211ENST00000467707 CHADLQ6NUI6 762 aa12.06□□□□□ -0.48
GAPVD1-211ENST00000467707 PRKAR2AP13861 404 aaKnown RBP12.05□□□□□ -0.48
GAPVD1-211ENST00000467707 CFAP44Q96MT7 982 aa12.05□□□□□ -0.48
GAPVD1-211ENST00000467707 SGIP1Q9BQI5 828 aa12.04□□□□□ -0.48
GAPVD1-211ENST00000467707 CHRDL2Q6WN34 429 aa12.01□□□□□ -0.49
GAPVD1-211ENST00000467707 PYGBP11216 843 aa12□□□□□ -0.49
GAPVD1-211ENST00000467707 STK25O00506 426 aa11.98□□□□□ -0.49
GAPVD1-211ENST00000467707 ZNF467Q7Z7K2 595 aaPredicted RBP11.97□□□□□ -0.49
GAPVD1-211ENST00000467707 TSPYL2Q9H2G4 693 aaPredicted RBP11.97□□□□□ -0.49
GAPVD1-211ENST00000467707 PAK3O75914 559 aaPredicted RBP11.95□□□□□ -0.5
GAPVD1-211ENST00000467707 RYDENQ9NUL5 291 aaKnown RBP11.94□□□□□ -0.5
GAPVD1-211ENST00000467707 PIP4P2Q8N4L2 257 aa11.92□□□□□ -0.5
GAPVD1-211ENST00000467707 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.91□□□□□ -0.5
GAPVD1-211ENST00000467707 ZFP91Q96JP5 570 aaPredicted RBP11.91□□□□□ -0.5
GAPVD1-211ENST00000467707 BCL11BQ9C0K0 894 aaPredicted RBP11.9□□□□□ -0.5
GAPVD1-211ENST00000467707 CCDC61Q9Y6R9 512 aa11.9□□□□□ -0.5
GAPVD1-211ENST00000467707 STK24Q9Y6E0 443 aa11.89□□□□□ -0.51
GAPVD1-211ENST00000467707 NKX1-1Q15270 411 aaPredicted RBP11.87□□□□□ -0.51
GAPVD1-211ENST00000467707 PDAP1Q13442 181 aaKnown RBP11.86□□□□□ -0.51
GAPVD1-211ENST00000467707 BCANQ96GW7 911 aa11.86□□□□□ -0.51
GAPVD1-211ENST00000467707 ZNF579Q8NAF0 562 aaKnown RBP11.85□□□□□ -0.51
GAPVD1-211ENST00000467707 TSHZ2Q9NRE2 1034 aa11.85□□□□□ -0.51
GAPVD1-211ENST00000467707 KDM2AQ9Y2K7 1162 aa11.84□□□□□ -0.51
GAPVD1-211ENST00000467707 GTPBP6O43824 516 aaPredicted RBP11.83□□□□□ -0.52
GAPVD1-211ENST00000467707 PCDHB8Q9UN66 801 aa11.77□□□□□ -0.53
GAPVD1-211ENST00000467707 PCDHB13Q9Y5F0 798 aa11.77□□□□□ -0.53
GAPVD1-211ENST00000467707 PSEN1P49768 467 aa11.76□□□□□ -0.53
GAPVD1-211ENST00000467707 KIF12Q96FN5 646 aa11.76□□□□□ -0.53
GAPVD1-211ENST00000467707 CD44P16070 742 aaKnown RBP11.74□□□□□ -0.53
GAPVD1-211ENST00000467707 MAP3K13O43283 966 aa11.72□□□□□ -0.53
GAPVD1-211ENST00000467707 IFNL1Q8IU54 200 aa11.72□□□□□ -0.53
GAPVD1-211ENST00000467707 ZRANB1Q9UGI0 708 aa11.72□□□□□ -0.53
GAPVD1-211ENST00000467707 C19orf67A6NJJ6 358 aa11.63□□□□□ -0.55
GAPVD1-211ENST00000467707 SOX12O15370 315 aa11.63□□□□□ -0.55
GAPVD1-211ENST00000467707 PHF12Q96QT6 1004 aa11.6□□□□□ -0.55
GAPVD1-211ENST00000467707 MFRPQ9BY79 579 aa11.6□□□□□ -0.55
GAPVD1-211ENST00000467707 NLRP6P59044 892 aa11.59□□□□□ -0.55
GAPVD1-211ENST00000467707 CABP2Q9NPB3 220 aa11.59□□□□□ -0.55
GAPVD1-211ENST00000467707 CLCN6P51797 869 aa11.56□□□□□ -0.56
GAPVD1-211ENST00000467707 NBR1Q14596 966 aa11.56□□□□□ -0.56
GAPVD1-211ENST00000467707 EFCAB3Q8N7B9 438 aa11.56□□□□□ -0.56
GAPVD1-211ENST00000467707 GOLGA2Q08379 1002 aa11.53□□□□□ -0.56
GAPVD1-211ENST00000467707 FBXO22Q8NEZ5 403 aa11.53□□□□□ -0.56
GAPVD1-211ENST00000467707 P3H3Q8IVL6 736 aa11.52□□□□□ -0.57
GAPVD1-211ENST00000467707 TMEM106CQ9BVX2 250 aa11.51□□□□□ -0.57
GAPVD1-211ENST00000467707 MS4A3Q96HJ5 214 aa11.5□□□□□ -0.57
GAPVD1-211ENST00000467707 TIE1P35590 1138 aa11.49□□□□□ -0.57
GAPVD1-211ENST00000467707 WDR70Q9NW82 654 aa11.49□□□□□ -0.57
GAPVD1-211ENST00000467707 PHF8Q9UPP1 1060 aa11.49□□□□□ -0.57
GAPVD1-211ENST00000467707 MKRN3Q13064 507 aaKnown RBP11.46□□□□□ -0.57
GAPVD1-211ENST00000467707 HAX1O00165 279 aa11.43□□□□□ -0.58
GAPVD1-211ENST00000467707 CADPS2Q86UW7 1296 aa11.43□□□□□ -0.58
GAPVD1-211ENST00000467707 PPP1R37O75864 691 aa11.42□□□□□ -0.58
GAPVD1-211ENST00000467707 TTLL13PA6NNM8 815 aa11.41□□□□□ -0.58
GAPVD1-211ENST00000467707 TRPC6Q9Y210 931 aa11.4□□□□□ -0.58
GAPVD1-211ENST00000467707 MS4A4AQ96JQ5 239 aa11.38□□□□□ -0.59
GAPVD1-211ENST00000467707 ILDR1Q86SU0 546 aaPredicted RBP11.36□□□□□ -0.59
GAPVD1-211ENST00000467707 BMP2KQ9NSY1 1161 aaPredicted RBP11.36□□□□□ -0.59
GAPVD1-211ENST00000467707 GALR2O43603 387 aaPredicted RBP11.34□□□□□ -0.59
GAPVD1-211ENST00000467707 TPRNQ4KMQ1 711 aa11.34□□□□□ -0.59
GAPVD1-211ENST00000467707 PDE4AP27815 886 aa11.33□□□□□ -0.6
GAPVD1-211ENST00000467707 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.33□□□□□ -0.63e-6■■■□□ 15.8
GAPVD1-211ENST00000467707 TRIM35Q9UPQ4 493 aa11.33□□□□□ -0.6
GAPVD1-211ENST00000467707 KCNV2Q8TDN2 545 aa11.32□□□□□ -0.6
GAPVD1-211ENST00000467707 PRKCSHP14314 528 aaPredicted RBP11.3□□□□□ -0.6
GAPVD1-211ENST00000467707 E2F4Q16254 413 aa11.3□□□□□ -0.6
GAPVD1-211ENST00000467707 ARHGEF1Q92888 912 aaKnown RBP11.29□□□□□ -0.6
GAPVD1-211ENST00000467707 CRISPLD2Q9H0B8 497 aa11.28□□□□□ -0.6
GAPVD1-211ENST00000467707 MFSD10Q14728 455 aa11.27□□□□□ -0.61
GAPVD1-211ENST00000467707 IER5LQ5T953 404 aa11.27□□□□□ -0.61
GAPVD1-211ENST00000467707 NCKAP5LQ9HCH0 1330 aa11.27□□□□□ -0.61
GAPVD1-211ENST00000467707 EVX2Q03828 476 aa11.26□□□□□ -0.61
GAPVD1-211ENST00000467707 ASTLQ6HA08 431 aaPredicted RBP11.26□□□□□ -0.61
GAPVD1-211ENST00000467707 LARP6Q9BRS8 491 aaKnown RBP11.26□□□□□ -0.61
GAPVD1-211ENST00000467707 DDX27Q96GQ7 796 aaKnown RBP11.24□□□□□ -0.61
GAPVD1-211ENST00000467707 TULP1O00294 542 aaPredicted RBP11.23□□□□□ -0.61
GAPVD1-211ENST00000467707 ATMINO43313 823 aaPredicted RBP11.23□□□□□ -0.61
GAPVD1-211ENST00000467707 ATN1P54259 1190 aaPredicted RBP11.21□□□□□ -0.61
GAPVD1-211ENST00000467707 OCEL1Q9H607 264 aa11.2□□□□□ -0.62
GAPVD1-211ENST00000467707 ARIH1Q9Y4X5 557 aaPredicted RBP11.2□□□□□ -0.62
GAPVD1-211ENST00000467707 IRX5P78411 483 aaPredicted RBP11.19□□□□□ -0.62
GAPVD1-211ENST00000467707 PDCD7Q8N8D1 485 aaKnown RBP11.19□□□□□ -0.62
GAPVD1-211ENST00000467707 GPHNQ9NQX3 736 aaPredicted RBP11.19□□□□□ -0.62
GAPVD1-211ENST00000467707 CAMK2BQ13554 666 aa11.17□□□□□ -0.62
GAPVD1-211ENST00000467707 G3V3G9 751 aa11.16□□□□□ -0.62
GAPVD1-211ENST00000467707 GABBR2O75899 941 aa11.16□□□□□ -0.62
GAPVD1-211ENST00000467707 MICALL2Q8IY33 904 aa11.16□□□□□ -0.62
GAPVD1-211ENST00000467707 PLCG2P16885 1265 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms