RNA–Protein interactions for RNA: ENST00000467353.1

CPS1-205, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 323 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-205ENST00000467353 GRIN2AQ12879 1464 aa8.06□□□□□ -1.12
CPS1-205ENST00000467353 HECW2Q9P2P5 1572 aa8.06□□□□□ -1.12
CPS1-205ENST00000467353 PRG4Q92954 1404 aaPredicted RBP8.06□□□□□ -1.12
CPS1-205ENST00000467353 CUX1P39880 1505 aa8.06□□□□□ -1.12
CPS1-205ENST00000467353 KDM6BO15054 1643 aa8.06□□□□□ -1.12
CPS1-205ENST00000467353 DIP2BQ9P265 1576 aa8.02□□□□□ -1.13
CPS1-205ENST00000467353 LMTK3Q96Q04 1460 aa8.02□□□□□ -1.13
CPS1-205ENST00000467353 ILDR2Q71H61 639 aa8.02□□□□□ -1.13
CPS1-205ENST00000467353 MAPKBP1O60336 1514 aa8.02□□□□□ -1.13
CPS1-205ENST00000467353 SHROOM2Q13796 1616 aa8.01□□□□□ -1.13
CPS1-205ENST00000467353 SOCS7O14512 581 aa8.01□□□□□ -1.13
CPS1-205ENST00000467353 ABCA10Q8WWZ4 1543 aa8□□□□□ -1.13
CPS1-205ENST00000467353 COL17A1Q9UMD9 1497 aaPredicted RBP8□□□□□ -1.13
CPS1-205ENST00000467353 FHAD1B1AJZ9 1412 aa7.98□□□□□ -1.13
CPS1-205ENST00000467353 PBRM1Q86U86 1689 aa7.98□□□□□ -1.13
CPS1-205ENST00000467353 ABCA5Q8WWZ7 1642 aa7.97□□□□□ -1.13
CPS1-205ENST00000467353 SLC4A1APQ9BWU0 796 aaKnown RBP7.96□□□□□ -1.14
CPS1-205ENST00000467353 ADCY10Q96PN6 1610 aa7.96□□□□□ -1.14
CPS1-205ENST00000467353 ADAMTS12P58397 1594 aa7.95□□□□□ -1.14
CPS1-205ENST00000467353 PPP6R1Q9UPN7 881 aa7.94□□□□□ -1.14
CPS1-205ENST00000467353 TSPOAP1O95153 1857 aa7.93□□□□□ -1.14
CPS1-205ENST00000467353 FOXD1Q16676 465 aa7.92□□□□□ -1.14
CPS1-205ENST00000467353 DISP3Q9P2K9 1392 aa7.92□□□□□ -1.14
CPS1-205ENST00000467353 WRNQ14191 1432 aaPredicted RBP eCLIP7.92□□□□□ -1.14
CPS1-205ENST00000467353 TTBK1Q5TCY1 1321 aaPredicted RBP7.91□□□□□ -1.14
CPS1-205ENST00000467353 ASXL2Q76L83 1435 aa7.9□□□□□ -1.14
CPS1-205ENST00000467353 NCBP3Q53F19 620 aaKnown RBP7.9□□□□□ -1.14
CPS1-205ENST00000467353 PTPRGP23470 1445 aa7.89□□□□□ -1.15
CPS1-205ENST00000467353 PLB1Q6P1J6 1458 aa7.87□□□□□ -1.15
CPS1-205ENST00000467353 CERKQ8TCT0 537 aa7.87□□□□□ -1.15
CPS1-205ENST00000467353 CSRNP3Q8WYN3 585 aa7.87□□□□□ -1.15
CPS1-205ENST00000467353 ERICH3Q5RHP9 1530 aa7.87□□□□□ -1.15
CPS1-205ENST00000467353 PPRC1Q5VV67 1664 aaKnown RBP7.86□□□□□ -1.15
CPS1-205ENST00000467353 GLI2P10070 1586 aa7.86□□□□□ -1.15
CPS1-205ENST00000467353 ABCC2Q92887 1545 aa7.85□□□□□ -1.15
CPS1-205ENST00000467353 TOP2BQ02880 1626 aa7.84□□□□□ -1.15
CPS1-205ENST00000467353 EPRSP07814 1512 aaKnown RBP7.83□□□□□ -1.16
CPS1-205ENST00000467353 RUSC2Q8N2Y8 1516 aa7.83□□□□□ -1.16
CPS1-205ENST00000467353 KIAA0586Q9BVV6 1533 aa7.83□□□□□ -1.16
CPS1-205ENST00000467353 HSPA2P54652 639 aa7.82□□□□□ -1.16
CPS1-205ENST00000467353 PPP4R3CPQ6ZMV5 832 aa7.82□□□□□ -1.16
CPS1-205ENST00000467353 TNIKQ9UKE5 1360 aa7.82□□□□□ -1.16
CPS1-205ENST00000467353 PTPRMP28827 1452 aa7.81□□□□□ -1.16
CPS1-205ENST00000467353 TEX14Q8IWB6 1497 aa7.81□□□□□ -1.16
CPS1-205ENST00000467353 IGF1RP08069 1367 aa7.79□□□□□ -1.16
CPS1-205ENST00000467353 UHRF1BP1LA0JNW5 1464 aa7.79□□□□□ -1.16
CPS1-205ENST00000467353 UACAQ9BZF9 1416 aa7.78□□□□□ -1.16
CPS1-205ENST00000467353 MAP3K4Q9Y6R4 1608 aa7.78□□□□□ -1.16
CPS1-205ENST00000467353 KCNH8Q96L42 1107 aa7.77□□□□□ -1.17
CPS1-205ENST00000467353 CARMIL2Q6F5E8 1435 aa7.76□□□□□ -1.17
CPS1-205ENST00000467353 CD109Q6YHK3 1445 aa7.76□□□□□ -1.17
CPS1-205ENST00000467353 PCF11O94913 1555 aaKnown RBP7.76□□□□□ -1.17
CPS1-205ENST00000467353 KDM5BQ9UGL1 1544 aa7.75□□□□□ -1.17
CPS1-205ENST00000467353 MAGI3Q5TCQ9 1506 aa7.73□□□□□ -1.17
CPS1-205ENST00000467353 RAPGEF3O95398 923 aa7.73□□□□□ -1.17
CPS1-205ENST00000467353 KIF21BO75037 1637 aa7.73□□□□□ -1.17
CPS1-205ENST00000467353 ARID4BQ4LE39 1312 aaPredicted RBP7.73□□□□□ -1.17
CPS1-205ENST00000467353 BIVM-ERCC5R4GMW8 1640 aa7.71□□□□□ -1.17
CPS1-205ENST00000467353 ADAMTSL3P82987 1691 aa7.71□□□□□ -1.18
CPS1-205ENST00000467353 CUL7Q14999 1698 aa7.71□□□□□ -1.18
CPS1-205ENST00000467353 WDR7Q9Y4E6 1490 aa7.71□□□□□ -1.18
CPS1-205ENST00000467353 DISP1Q96F81 1524 aa7.7□□□□□ -1.18
CPS1-205ENST00000467353 PIAS4Q8N2W9 510 aaPredicted RBP7.7□□□□□ -1.18
CPS1-205ENST00000467353 ARAP3Q8WWN8 1544 aa7.69□□□□□ -1.18
CPS1-205ENST00000467353 SPATA31D1Q6ZQQ2 1576 aa7.69□□□□□ -1.18
CPS1-205ENST00000467353 CARMIL1Q5VZK9 1371 aa7.69□□□□□ -1.18
CPS1-205ENST00000467353 ZCCHC11Q5TAX3 1644 aaKnown RBP7.67□□□□□ -1.18
CPS1-205ENST00000467353 KIF27Q86VH2 1401 aa7.65□□□□□ -1.18
CPS1-205ENST00000467353 MADDQ8WXG6 1647 aa7.65□□□□□ -1.18
CPS1-205ENST00000467353 DMRT2Q9Y5R5 561 aa7.65□□□□□ -1.18
CPS1-205ENST00000467353 PHLDB1Q86UU1 1377 aa7.64□□□□□ -1.19
CPS1-205ENST00000467353 ARID3CA6NKF2 412 aa7.63□□□□□ -1.19
CPS1-205ENST00000467353 SUPT5HO00267 1087 aaKnown RBP7.63□□□□□ -1.19
CPS1-205ENST00000467353 IQGAP2Q13576 1575 aa7.63□□□□□ -1.19
CPS1-205ENST00000467353 YEATS2Q9ULM3 1422 aa7.62□□□□□ -1.19
CPS1-205ENST00000467353 BCORL1Q5H9F3 1711 aa7.62□□□□□ -1.19
CPS1-205ENST00000467353 SLC24A1O60721 1099 aa7.62□□□□□ -1.19
CPS1-205ENST00000467353 CEBPAP49715 358 aaPredicted RBP7.62□□□□□ -1.19
CPS1-205ENST00000467353 MLECQ14165 292 aa7.62□□□□□ -1.19
CPS1-205ENST00000467353 NPM3O75607 178 aaKnown RBP7.61□□□□□ -1.19
CPS1-205ENST00000467353 CFAP43Q8NDM7 1665 aa7.6□□□□□ -1.19
CPS1-205ENST00000467353 UGGT2Q9NYU1 1516 aa7.6□□□□□ -1.19
CPS1-205ENST00000467353 RIMS1Q86UR5 1692 aaKnown RBP7.58□□□□□ -1.2
CPS1-205ENST00000467353 SCAF1Q9H7N4 1312 aaKnown RBP7.57□□□□□ -1.2
CPS1-205ENST00000467353 UBAP1LF5GYI3 381 aa7.57□□□□□ -1.2
CPS1-205ENST00000467353 KIAA0556O60303 1618 aa7.56□□□□□ -1.2
CPS1-205ENST00000467353 NEO1Q92859 1461 aa7.56□□□□□ -1.2
CPS1-205ENST00000467353 FRMPD1Q5SYB0 1578 aa7.56□□□□□ -1.2
CPS1-205ENST00000467353 POGZQ7Z3K3 1410 aa7.56□□□□□ -1.2
CPS1-205ENST00000467353 ATP10BO94823 1461 aa7.55□□□□□ -1.2
CPS1-205ENST00000467353 ABCA8O94911 1581 aa7.55□□□□□ -1.2
CPS1-205ENST00000467353 PTPRTO14522 1441 aa7.55□□□□□ -1.2
CPS1-205ENST00000467353 LTBP4Q8N2S1 1624 aa7.55□□□□□ -1.2
CPS1-205ENST00000467353 FHOD3Q2V2M9 1422 aa7.53□□□□□ -1.2
CPS1-205ENST00000467353 AKNAQ7Z591 1439 aa7.53□□□□□ -1.2
CPS1-205ENST00000467353 HSPA1LP34931 641 aa7.53□□□□□ -1.2
CPS1-205ENST00000467353 AMER1Q5JTC6 1135 aaPredicted RBP7.53□□□□□ -1.2
CPS1-205ENST00000467353 FANCAO15360 1455 aa7.53□□□□□ -1.2
CPS1-205ENST00000467353 DENND4BO75064 1496 aaPredicted RBP7.53□□□□□ -1.2
CPS1-205ENST00000467353 STRCQ7RTU9 1775 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms