RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 DNAJC5BQ9UF47 199 aa26.17■■□□□ 1.78
SNAPC3-205ENST00000467062 RAD54L2Q9Y4B4 1467 aa26.16■■□□□ 1.78
SNAPC3-205ENST00000467062 DHX57Q6P158 1386 aaKnown RBP26.08■■□□□ 1.77
SNAPC3-205ENST00000467062 PRDM2Q13029 1718 aa26.06■■□□□ 1.76
SNAPC3-205ENST00000467062 CCNB3Q8WWL7 1395 aa26.05■■□□□ 1.76
SNAPC3-205ENST00000467062 RRBP1Q9P2E9 1410 aaKnown RBP26.03■■□□□ 1.76
SNAPC3-205ENST00000467062 POLA1P09884 1462 aaPredicted RBP25.98■■□□□ 1.75
SNAPC3-205ENST00000467062 TOPBP1Q92547 1522 aa25.96■■□□□ 1.75
SNAPC3-205ENST00000467062 FAM50AQ14320 339 aaKnown RBP25.95■■□□□ 1.74
SNAPC3-205ENST00000467062 ERICH6Q7L0X2 663 aa25.95■■□□□ 1.74
SNAPC3-205ENST00000467062 FHOD3Q2V2M9 1422 aa25.93■■□□□ 1.74
SNAPC3-205ENST00000467062 TDRD9Q8NDG6 1382 aaKnown RBP25.91■■□□□ 1.74
SNAPC3-205ENST00000467062 PHLDB1Q86UU1 1377 aa25.89■■□□□ 1.74
SNAPC3-205ENST00000467062 DNMBPQ6XZF7 1577 aa25.88■■□□□ 1.73
SNAPC3-205ENST00000467062 ABCA10Q8WWZ4 1543 aa25.86■■□□□ 1.73
SNAPC3-205ENST00000467062 TIAM1Q13009 1591 aa25.85■■□□□ 1.73
SNAPC3-205ENST00000467062 RAB3GAP2Q9H2M9 1393 aa25.84■■□□□ 1.73
SNAPC3-205ENST00000467062 LRRC9Q6ZRR7 1453 aa25.84■■□□□ 1.73
SNAPC3-205ENST00000467062 URB2Q14146 1524 aaKnown RBP25.81■■□□□ 1.72
SNAPC3-205ENST00000467062 FHAD1B1AJZ9 1412 aa25.78■■□□□ 1.72
SNAPC3-205ENST00000467062 PCF11O94913 1555 aaKnown RBP25.75■■□□□ 1.71
SNAPC3-205ENST00000467062 SIN3AQ96ST3 1273 aa25.72■■□□□ 1.71
SNAPC3-205ENST00000467062 MAP3K1Q13233 1512 aa25.68■■□□□ 1.7
SNAPC3-205ENST00000467062 SETD5Q9C0A6 1442 aa25.67■■□□□ 1.7
SNAPC3-205ENST00000467062 RBM19Q9Y4C8 960 aaKnown RBP25.66■■□□□ 1.7
SNAPC3-205ENST00000467062 PDS5BQ9NTI5 1447 aa25.64■■□□□ 1.69
SNAPC3-205ENST00000467062 LAMC3Q9Y6N6 1575 aa25.64■■□□□ 1.69
SNAPC3-205ENST00000467062 GAPVD1Q14C86 1478 aa25.63■■□□□ 1.69
SNAPC3-205ENST00000467062 CASKIN1Q8WXD9 1431 aa25.61■■□□□ 1.69
SNAPC3-205ENST00000467062 MAPKBP1O60336 1514 aa25.59■■□□□ 1.69
SNAPC3-205ENST00000467062 ARID3CA6NKF2 412 aa25.58■■□□□ 1.69
SNAPC3-205ENST00000467062 FYCO1Q9BQS8 1478 aa25.57■■□□□ 1.68
SNAPC3-205ENST00000467062 CUL7Q14999 1698 aa25.56■■□□□ 1.68
SNAPC3-205ENST00000467062 MTUS2Q5JR59 1369 aa25.56■■□□□ 1.68
SNAPC3-205ENST00000467062 FMN1Q68DA7 1419 aa25.53■■□□□ 1.68
SNAPC3-205ENST00000467062 EFCAB5A4FU69 1503 aa25.53■■□□□ 1.68
SNAPC3-205ENST00000467062 MYT1LQ9UL68 1186 aa25.52■■□□□ 1.68
SNAPC3-205ENST00000467062 CFAP43Q8NDM7 1665 aa25.52■■□□□ 1.68
SNAPC3-205ENST00000467062 HIRIP3Q9BW71 556 aaPredicted RBP25.51■■□□□ 1.68
SNAPC3-205ENST00000467062 AQRO60306 1485 aaKnown RBP eCLIP25.5■■□□□ 1.671e-7■■□□□ 13.1
SNAPC3-205ENST00000467062 BCANQ96GW7 911 aa25.5■■□□□ 1.67
SNAPC3-205ENST00000467062 SNAPC4Q5SXM2 1469 aa25.48■■□□□ 1.67
SNAPC3-205ENST00000467062 KIF21AQ7Z4S6 1674 aa25.48■■□□□ 1.67
SNAPC3-205ENST00000467062 CTTNBP2Q8WZ74 1663 aa25.48■■□□□ 1.67
SNAPC3-205ENST00000467062 ABCA5Q8WWZ7 1642 aa25.47■■□□□ 1.67
SNAPC3-205ENST00000467062 WDR97A6NE52 1622 aa25.47■■□□□ 1.67
SNAPC3-205ENST00000467062 FKBP8Q14318 412 aa25.46■■□□□ 1.67
SNAPC3-205ENST00000467062 FGD6Q6ZV73 1430 aa25.44■■□□□ 1.66
SNAPC3-205ENST00000467062 KCNH8Q96L42 1107 aa25.43■■□□□ 1.66
SNAPC3-205ENST00000467062 PTPRKQ15262 1439 aa25.43■■□□□ 1.66
SNAPC3-205ENST00000467062 MSH5O43196 834 aa25.41■■□□□ 1.66
SNAPC3-205ENST00000467062 CHIC2Q9UKJ5 165 aa25.4■■□□□ 1.66
SNAPC3-205ENST00000467062 DDX10Q13206 875 aaKnown RBP25.38■■□□□ 1.65
SNAPC3-205ENST00000467062 NEFLP07196 543 aa25.36■■□□□ 1.65
SNAPC3-205ENST00000467062 TARBP1Q13395 1621 aaKnown RBP25.35■■□□□ 1.65
SNAPC3-205ENST00000467062 NCOA2Q15596 1464 aa25.35■■□□□ 1.65
SNAPC3-205ENST00000467062 FANCIQ9NVI1 1328 aa25.34■■□□□ 1.65
SNAPC3-205ENST00000467062 RRP7BPQ9NSQ0 103 aa25.34■■□□□ 1.65
SNAPC3-205ENST00000467062 GRIN2BQ13224 1484 aa25.33■■□□□ 1.65
SNAPC3-205ENST00000467062 SAMD9Q5K651 1589 aa25.33■■□□□ 1.65
SNAPC3-205ENST00000467062 LRRIQ1Q96JM4 1722 aa25.3■■□□□ 1.64
SNAPC3-205ENST00000467062 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.3■■□□□ 1.64
SNAPC3-205ENST00000467062 PPP1R15AO75807 674 aaPredicted RBP25.29■■□□□ 1.64
SNAPC3-205ENST00000467062 MYOM3Q5VTT5 1437 aa25.27■■□□□ 1.64
SNAPC3-205ENST00000467062 ZNF608Q9ULD9 1512 aaPredicted RBP25.27■■□□□ 1.64
SNAPC3-205ENST00000467062 MAGI3Q5TCQ9 1506 aa25.26■■□□□ 1.63
SNAPC3-205ENST00000467062 CCDC18Q5T9S5 1454 aa25.25■■□□□ 1.63
SNAPC3-205ENST00000467062 NAIPQ13075 1403 aa25.21■■□□□ 1.63
SNAPC3-205ENST00000467062 MRC2Q9UBG0 1479 aa25.21■■□□□ 1.63
SNAPC3-205ENST00000467062 HFM1A2PYH4 1435 aa25.2■■□□□ 1.63
SNAPC3-205ENST00000467062 DEKP35659 375 aaKnown RBP25.2■■□□□ 1.63
SNAPC3-205ENST00000467062 TONSLQ96HA7 1378 aa25.19■■□□□ 1.62
SNAPC3-205ENST00000467062 TRIM52Q96A61 297 aa25.19■■□□□ 1.62
SNAPC3-205ENST00000467062 CDK13Q14004 1512 aaKnown RBP25.19■■□□□ 1.62
SNAPC3-205ENST00000467062 FBLN2P98095 1184 aa25.15■■□□□ 1.62
SNAPC3-205ENST00000467062 TIMELESSQ9UNS1 1208 aa25.15■■□□□ 1.62
SNAPC3-205ENST00000467062 IQGAP2Q13576 1575 aa25.14■■□□□ 1.62
SNAPC3-205ENST00000467062 ANO8Q9HCE9 1232 aaPredicted RBP25.14■■□□□ 1.61
SNAPC3-205ENST00000467062 UACAQ9BZF9 1416 aa25.14■■□□□ 1.61
SNAPC3-205ENST00000467062 PBRM1Q86U86 1689 aa25.14■■□□□ 1.61
SNAPC3-205ENST00000467062 EPRSP07814 1512 aaKnown RBP25.13■■□□□ 1.61
SNAPC3-205ENST00000467062 EHBP1L1Q8N3D4 1523 aa25.13■■□□□ 1.61
SNAPC3-205ENST00000467062 PTPN23Q9H3S7 1636 aa25.12■■□□□ 1.61
SNAPC3-205ENST00000467062 FOXD1Q16676 465 aa25.12■■□□□ 1.61
SNAPC3-205ENST00000467062 SUPT6HQ7KZ85 1726 aaKnown RBP25.12■■□□□ 1.61
SNAPC3-205ENST00000467062 UGGT2Q9NYU1 1516 aa25.11■■□□□ 1.61
SNAPC3-205ENST00000467062 ADAMTS12P58397 1594 aa25.11■■□□□ 1.61
SNAPC3-205ENST00000467062 ERICH6BQ5W0A0 696 aa25.1■■□□□ 1.61
SNAPC3-205ENST00000467062 ZNF644Q9H582 1327 aaPredicted RBP25.1■■□□□ 1.61
SNAPC3-205ENST00000467062 THOC2Q8NI27 1593 aaKnown RBP25.05■■□□□ 1.6
SNAPC3-205ENST00000467062 CDK11AQ9UQ88 783 aaPredicted RBP25.05■■□□□ 1.6
SNAPC3-205ENST00000467062 ARHGEF11O15085 1522 aa25.04■■□□□ 1.6
SNAPC3-205ENST00000467062 IFT140Q96RY7 1462 aa25.03■■□□□ 1.6
SNAPC3-205ENST00000467062 CHMP7Q8WUX9 453 aaPredicted RBP25.02■■□□□ 1.6
SNAPC3-205ENST00000467062 HECW1Q76N89 1606 aa25.02■■□□□ 1.6
SNAPC3-205ENST00000467062 MPHOSPH9Q99550 1183 aa24.98■■□□□ 1.59
SNAPC3-205ENST00000467062 ERCC6Q03468 1493 aa24.98■■□□□ 1.59
SNAPC3-205ENST00000467062 KDM6BO15054 1643 aa24.97■■□□□ 1.59
SNAPC3-205ENST00000467062 WDR62O43379 1518 aa24.97■■□□□ 1.59
SNAPC3-205ENST00000467062 DISP1Q96F81 1524 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms