RNA–Protein interactions for RNA: ENST00000466425.1

PSMB4-202, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 665 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-202ENST00000466425 EIF4G1Q04637 1599 aaKnown RBP10.86□□□□□ -0.67
PSMB4-202ENST00000466425 BAZ1AQ9NRL2 1556 aaPredicted RBP10.86□□□□□ -0.67
PSMB4-202ENST00000466425 FAM163AQ96GL9 167 aaPredicted RBP10.84□□□□□ -0.67
PSMB4-202ENST00000466425 MROH2BQ7Z745 1585 aa10.84□□□□□ -0.67
PSMB4-202ENST00000466425 FARP1Q9Y4F1 1045 aaPredicted RBP10.83□□□□□ -0.68
PSMB4-202ENST00000466425 CC2D2AQ9P2K1 1620 aa10.83□□□□□ -0.68
PSMB4-202ENST00000466425 LCE2DQ5TA82 110 aaPredicted RBP10.82□□□□□ -0.68
PSMB4-202ENST00000466425 ZNF692Q9BU19 519 aaPredicted RBP10.8□□□□□ -0.68
PSMB4-202ENST00000466425 ZNF579Q8NAF0 562 aaKnown RBP10.79□□□□□ -0.68
PSMB4-202ENST00000466425 MKRN4PQ13434 485 aaPredicted RBP10.78□□□□□ -0.68
PSMB4-202ENST00000466425 GALR2O43603 387 aaPredicted RBP10.76□□□□□ -0.69
PSMB4-202ENST00000466425 SSUH2Q9Y2M2 353 aa10.76□□□□□ -0.69
PSMB4-202ENST00000466425 ZRANB1Q9UGI0 708 aa10.74□□□□□ -0.69
PSMB4-202ENST00000466425 TRIM41Q8WV44 630 aa10.72□□□□□ -0.69
PSMB4-202ENST00000466425 SMARCA4P51532 1647 aa10.72□□□□□ -0.69
PSMB4-202ENST00000466425 CDAN1Q8IWY9 1227 aa10.7□□□□□ -0.7
PSMB4-202ENST00000466425 WIZO95785 1651 aa10.69□□□□□ -0.7
PSMB4-202ENST00000466425 TOP2AP11388 1531 aaKnown RBP10.69□□□□□ -0.7
PSMB4-202ENST00000466425 MAMSTRQ6ZN01 415 aa10.68□□□□□ -0.7
PSMB4-202ENST00000466425 POTEJP0CG39 1038 aa10.67□□□□□ -0.7
PSMB4-202ENST00000466425 PELP1Q8IZL8 1130 aaKnown RBP10.66□□□□□ -0.7
PSMB4-202ENST00000466425 SMARCA2P51531 1590 aa10.64□□□□□ -0.71
PSMB4-202ENST00000466425 PEG3Q9GZU2 1588 aa10.63□□□□□ -0.71
PSMB4-202ENST00000466425 SLC24A1O60721 1099 aa10.61□□□□□ -0.71
PSMB4-202ENST00000466425 HMGXB3Q12766 1538 aa10.6□□□□□ -0.71
PSMB4-202ENST00000466425 METRNQ9UJH8 293 aa10.6□□□□□ -0.71
PSMB4-202ENST00000466425 CCDC88BA6NC98 1476 aa10.59□□□□□ -0.71
PSMB4-202ENST00000466425 NCAPD3P42695 1498 aa10.56□□□□□ -0.72
PSMB4-202ENST00000466425 SCUBE2Q9NQ36 999 aa10.56□□□□□ -0.72
PSMB4-202ENST00000466425 ATAD2BQ9ULI0 1458 aa10.55□□□□□ -0.72
PSMB4-202ENST00000466425 LOC105371045A0A1W2PR82 267 aa10.55□□□□□ -0.72
PSMB4-202ENST00000466425 MMRN1Q13201 1228 aa10.54□□□□□ -0.72
PSMB4-202ENST00000466425 C7P10643 843 aa10.53□□□□□ -0.72
PSMB4-202ENST00000466425 BAZ1BQ9UIG0 1483 aaKnown RBP10.51□□□□□ -0.73
PSMB4-202ENST00000466425 SPDYE4A6NLX3 237 aa10.51□□□□□ -0.73
PSMB4-202ENST00000466425 SLC39A7Q92504 469 aa10.51□□□□□ -0.73
PSMB4-202ENST00000466425 PHF12Q96QT6 1004 aa10.48□□□□□ -0.73
PSMB4-202ENST00000466425 FAM9AQ8IZU1 332 aaPredicted RBP10.47□□□□□ -0.73
PSMB4-202ENST00000466425 EEA1Q15075 1411 aa10.46□□□□□ -0.74
PSMB4-202ENST00000466425 SPNS2Q8IVW8 549 aa10.45□□□□□ -0.74
PSMB4-202ENST00000466425 ASTLQ6HA08 431 aaPredicted RBP10.44□□□□□ -0.74
PSMB4-202ENST00000466425 PRDM2Q13029 1718 aa10.42□□□□□ -0.74
PSMB4-202ENST00000466425 ATMINO43313 823 aaPredicted RBP10.41□□□□□ -0.74
PSMB4-202ENST00000466425 PAK3O75914 559 aaPredicted RBP10.41□□□□□ -0.74
PSMB4-202ENST00000466425 WRNQ14191 1432 aaPredicted RBP eCLIP10.4□□□□□ -0.75
PSMB4-202ENST00000466425 TRIM26Q12899 539 aaPredicted RBP10.38□□□□□ -0.75
PSMB4-202ENST00000466425 RTN4Q9NQC3 1192 aaKnown RBP10.38□□□□□ -0.75
PSMB4-202ENST00000466425 LAMC3Q9Y6N6 1575 aa10.38□□□□□ -0.75
PSMB4-202ENST00000466425 PCGF6Q9BYE7 350 aa10.37□□□□□ -0.75
PSMB4-202ENST00000466425 ABCC8Q09428 1581 aa10.36□□□□□ -0.75
PSMB4-202ENST00000466425 FKBP8Q14318 412 aa10.33□□□□□ -0.76
PSMB4-202ENST00000466425 KIF21AQ7Z4S6 1674 aa10.32□□□□□ -0.76
PSMB4-202ENST00000466425 HRCP23327 699 aa10.31□□□□□ -0.76
PSMB4-202ENST00000466425 CREBZFQ9NS37 354 aa10.31□□□□□ -0.76
PSMB4-202ENST00000466425 TNIKQ9UKE5 1360 aa10.3□□□□□ -0.76
PSMB4-202ENST00000466425 SOGA1O94964 1423 aa10.29□□□□□ -0.76
PSMB4-202ENST00000466425 ST18O60284 1047 aa10.28□□□□□ -0.76
PSMB4-202ENST00000466425 MS4A3Q96HJ5 214 aa10.28□□□□□ -0.76
PSMB4-202ENST00000466425 AMER1Q5JTC6 1135 aaPredicted RBP10.27□□□□□ -0.77
PSMB4-202ENST00000466425 STAG3Q9UJ98 1225 aa10.27□□□□□ -0.77
PSMB4-202ENST00000466425 CFTRP13569 1480 aa10.27□□□□□ -0.77
PSMB4-202ENST00000466425 NESP48681 1621 aa10.26□□□□□ -0.77
PSMB4-202ENST00000466425 ERCC6Q03468 1493 aa10.26□□□□□ -0.77
PSMB4-202ENST00000466425 GOLGA3Q08378 1498 aa10.26□□□□□ -0.77
PSMB4-202ENST00000466425 CEP164Q9UPV0 1460 aa10.24□□□□□ -0.77
PSMB4-202ENST00000466425 THOC2Q8NI27 1593 aaKnown RBP10.24□□□□□ -0.77
PSMB4-202ENST00000466425 UBTFP17480 764 aaKnown RBP10.24□□□□□ -0.77
PSMB4-202ENST00000466425 POTEFA5A3E0 1075 aa10.23□□□□□ -0.77
PSMB4-202ENST00000466425 ATN1P54259 1190 aaPredicted RBP10.23□□□□□ -0.77
PSMB4-202ENST00000466425 SYNJ1O43426 1573 aa10.22□□□□□ -0.77
PSMB4-202ENST00000466425 CADPSQ9ULU8 1353 aa10.22□□□□□ -0.77
PSMB4-202ENST00000466425 PDS5BQ9NTI5 1447 aa10.22□□□□□ -0.77
PSMB4-202ENST00000466425 TOP2BQ02880 1626 aa10.22□□□□□ -0.77
PSMB4-202ENST00000466425 CEP162Q5TB80 1403 aa10.21□□□□□ -0.78
PSMB4-202ENST00000466425 CUX2O14529 1486 aa10.2□□□□□ -0.78
PSMB4-202ENST00000466425 ZEB1P37275 1124 aaPredicted RBP10.19□□□□□ -0.78
PSMB4-202ENST00000466425 RUSC2Q8N2Y8 1516 aa10.18□□□□□ -0.78
PSMB4-202ENST00000466425 KIF21BO75037 1637 aa10.18□□□□□ -0.78
PSMB4-202ENST00000466425 BIVM-ERCC5R4GMW8 1640 aa10.16□□□□□ -0.78
PSMB4-202ENST00000466425 KIF27Q86VH2 1401 aa10.15□□□□□ -0.79
PSMB4-202ENST00000466425 PROM2Q8N271 834 aa10.14□□□□□ -0.79
PSMB4-202ENST00000466425 WDR62O43379 1518 aa10.13□□□□□ -0.79
PSMB4-202ENST00000466425 FANCD2Q9BXW9 1451 aa10.13□□□□□ -0.79
PSMB4-202ENST00000466425 CUX1P39880 1505 aa10.12□□□□□ -0.79
PSMB4-202ENST00000466425 MRC2Q9UBG0 1479 aa10.12□□□□□ -0.79
PSMB4-202ENST00000466425 NPM1P06748 294 aaKnown RBP eCLIP10.12□□□□□ -0.79
PSMB4-202ENST00000466425 SLAIN1Q8ND83 568 aa10.12□□□□□ -0.79
PSMB4-202ENST00000466425 CLIP1P30622 1438 aa10.11□□□□□ -0.79
PSMB4-202ENST00000466425 SEC24BO95487 1268 aa10.1□□□□□ -0.79
PSMB4-202ENST00000466425 ERICH3Q5RHP9 1530 aa10.1□□□□□ -0.79
PSMB4-202ENST00000466425 PRXQ9BXM0 1461 aa10.1□□□□□ -0.79
PSMB4-202ENST00000466425 COLQQ9Y215 455 aaPredicted RBP10.08□□□□□ -0.8
PSMB4-202ENST00000466425 RAPGEF2Q9Y4G8 1499 aa10.07□□□□□ -0.8
PSMB4-202ENST00000466425 MIER1Q8N108 512 aa10.06□□□□□ -0.8
PSMB4-202ENST00000466425 TMEM121BQ9BXQ6 578 aaPredicted RBP10.05□□□□□ -0.8
PSMB4-202ENST00000466425 VPS8Q8N3P4 1428 aa10.05□□□□□ -0.8
PSMB4-202ENST00000466425 BMP2KQ9NSY1 1161 aaPredicted RBP10.04□□□□□ -0.8
PSMB4-202ENST00000466425 DNMBPQ6XZF7 1577 aa10.04□□□□□ -0.8
PSMB4-202ENST00000466425 PLEKHG5O94827 1062 aa10.03□□□□□ -0.8
PSMB4-202ENST00000466425 URB2Q14146 1524 aaKnown RBP10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms