RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 EIF4G1Q04637 1599 aaKnown RBP13□□□□□ -0.33
SCAF11-205ENST00000465950 CUX2O14529 1486 aa12.99□□□□□ -0.33
SCAF11-205ENST00000465950 FHAD1B1AJZ9 1412 aa12.99□□□□□ -0.33
SCAF11-205ENST00000465950 CENPBP07199 599 aaPredicted RBP12.99□□□□□ -0.33
SCAF11-205ENST00000465950 CARMIL1Q5VZK9 1371 aa12.98□□□□□ -0.33
SCAF11-205ENST00000465950 CCNB3Q8WWL7 1395 aa12.98□□□□□ -0.33
SCAF11-205ENST00000465950 TRIM26Q12899 539 aaPredicted RBP12.98□□□□□ -0.33
SCAF11-205ENST00000465950 PHF23Q9BUL5 403 aaPredicted RBP12.98□□□□□ -0.33
SCAF11-205ENST00000465950 FAM69CQ0P6D2 419 aa12.96□□□□□ -0.33
SCAF11-205ENST00000465950 MEX3CQ5U5Q3 659 aaKnown RBP12.95□□□□□ -0.34
SCAF11-205ENST00000465950 FANCD2Q9BXW9 1451 aa12.95□□□□□ -0.34
SCAF11-205ENST00000465950 ATAD2BQ9ULI0 1458 aa12.95□□□□□ -0.34
SCAF11-205ENST00000465950 CEP162Q5TB80 1403 aa12.95□□□□□ -0.34
SCAF11-205ENST00000465950 POGZQ7Z3K3 1410 aa12.95□□□□□ -0.34
SCAF11-205ENST00000465950 JPH4Q96JJ6 628 aa12.94□□□□□ -0.34
SCAF11-205ENST00000465950 POGKQ9P215 609 aa12.94□□□□□ -0.34
SCAF11-205ENST00000465950 DMRT2Q9Y5R5 561 aa12.93□□□□□ -0.34
SCAF11-205ENST00000465950 NPHP1O15259 732 aa12.93□□□□□ -0.34
SCAF11-205ENST00000465950 TMX4Q9H1E5 349 aaPredicted RBP12.93□□□□□ -0.34
SCAF11-205ENST00000465950 NCAPD3P42695 1498 aa12.92□□□□□ -0.34
SCAF11-205ENST00000465950 LMOD2Q6P5Q4 547 aa12.92□□□□□ -0.34
SCAF11-205ENST00000465950 DAXXQ9UER7 740 aaPredicted RBP12.92□□□□□ -0.34
SCAF11-205ENST00000465950 PTPRGP23470 1445 aa12.92□□□□□ -0.34
SCAF11-205ENST00000465950 MRC2Q9UBG0 1479 aa12.91□□□□□ -0.34
SCAF11-205ENST00000465950 ZBTB7CA1YPR0 619 aa12.91□□□□□ -0.34
SCAF11-205ENST00000465950 TDRD9Q8NDG6 1382 aaKnown RBP12.88□□□□□ -0.35
SCAF11-205ENST00000465950 NEUROD1Q13562 356 aa12.87□□□□□ -0.35
SCAF11-205ENST00000465950 IFT140Q96RY7 1462 aa12.86□□□□□ -0.35
SCAF11-205ENST00000465950 PPARGC1BQ86YN6 1023 aaKnown RBP12.86□□□□□ -0.35
SCAF11-205ENST00000465950 CCDC9Q9Y3X0 531 aaKnown RBP12.85□□□□□ -0.35
SCAF11-205ENST00000465950 SF3B2Q13435 895 aaKnown RBP12.85□□□□□ -0.35
SCAF11-205ENST00000465950 GGT6Q6P531 493 aa12.84□□□□□ -0.35
SCAF11-205ENST00000465950 ERICH6Q7L0X2 663 aa12.84□□□□□ -0.35
SCAF11-205ENST00000465950 CANXP27824 592 aaKnown RBP12.83□□□□□ -0.36
SCAF11-205ENST00000465950 FMN1Q68DA7 1419 aa12.83□□□□□ -0.36
SCAF11-205ENST00000465950 TONSLQ96HA7 1378 aa12.82□□□□□ -0.36
SCAF11-205ENST00000465950 CHMP4AQ9BY43 222 aa12.82□□□□□ -0.36
SCAF11-205ENST00000465950 SPAG9O60271 1321 aaKnown RBP12.8□□□□□ -0.36
SCAF11-205ENST00000465950 CFAP53Q96M91 514 aa12.8□□□□□ -0.36
SCAF11-205ENST00000465950 CHIC2Q9UKJ5 165 aa12.79□□□□□ -0.36
SCAF11-205ENST00000465950 CLSPNQ9HAW4 1339 aa12.79□□□□□ -0.36
SCAF11-205ENST00000465950 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.79□□□□□ -0.36
SCAF11-205ENST00000465950 TOP2AP11388 1531 aaKnown RBP12.78□□□□□ -0.36
SCAF11-205ENST00000465950 PNNQ9H307 717 aaKnown RBP12.77□□□□□ -0.37
SCAF11-205ENST00000465950 CNGB1Q14028 1251 aaPredicted RBP12.76□□□□□ -0.37
SCAF11-205ENST00000465950 CC2D2AQ9P2K1 1620 aa12.76□□□□□ -0.37
SCAF11-205ENST00000465950 WASHC2AQ641Q2 1341 aa12.76□□□□□ -0.37
SCAF11-205ENST00000465950 WASHC2CQ9Y4E1 1318 aa12.75□□□□□ -0.37
SCAF11-205ENST00000465950 GRIN2BQ13224 1484 aa12.75□□□□□ -0.37
SCAF11-205ENST00000465950 SMARCA4P51532 1647 aa12.72□□□□□ -0.37
SCAF11-205ENST00000465950 MROH2BQ7Z745 1585 aa12.72□□□□□ -0.37
SCAF11-205ENST00000465950 ANO8Q9HCE9 1232 aaPredicted RBP12.72□□□□□ -0.37
SCAF11-205ENST00000465950 ANP32CO43423 234 aa12.71□□□□□ -0.37
SCAF11-205ENST00000465950 CSB-PGBD3P0DP91 1061 aa12.71□□□□□ -0.37
SCAF11-205ENST00000465950 TNIKQ9UKE5 1360 aa12.71□□□□□ -0.37
SCAF11-205ENST00000465950 GAPVD1Q14C86 1478 aa12.7□□□□□ -0.38
SCAF11-205ENST00000465950 CCDC18Q5T9S5 1454 aa12.69□□□□□ -0.38
SCAF11-205ENST00000465950 NUDCQ9Y266 331 aa12.69□□□□□ -0.38
SCAF11-205ENST00000465950 ATF3P18847 181 aa12.69□□□□□ -0.38
SCAF11-205ENST00000465950 LOC105371045A0A1W2PR82 267 aa12.68□□□□□ -0.38
SCAF11-205ENST00000465950 HMGXB3Q12766 1538 aa12.68□□□□□ -0.38
SCAF11-205ENST00000465950 PLEKHG5O94827 1062 aa12.67□□□□□ -0.38
SCAF11-205ENST00000465950 TMC1Q8TDI8 760 aa12.67□□□□□ -0.38
SCAF11-205ENST00000465950 ANKRD30AQ9BXX3 1397 aa12.67□□□□□ -0.38
SCAF11-205ENST00000465950 CCDC88BA6NC98 1476 aa12.67□□□□□ -0.38
SCAF11-205ENST00000465950 ARXQ96QS3 562 aa12.66□□□□□ -0.38
SCAF11-205ENST00000465950 RAPGEF2Q9Y4G8 1499 aa12.66□□□□□ -0.38
SCAF11-205ENST00000465950 KIF3BO15066 747 aa12.65□□□□□ -0.38
SCAF11-205ENST00000465950 HDGFL2Q7Z4V5 671 aaPredicted RBP12.65□□□□□ -0.38
SCAF11-205ENST00000465950 SENP3Q9H4L4 574 aaPredicted RBP12.65□□□□□ -0.38
SCAF11-205ENST00000465950 KDM2AQ9Y2K7 1162 aa12.64□□□□□ -0.39
SCAF11-205ENST00000465950 LAMC3Q9Y6N6 1575 aa12.64□□□□□ -0.39
SCAF11-205ENST00000465950 WDR43Q15061 677 aaKnown RBP eCLIP12.64□□□□□ -0.39
SCAF11-205ENST00000465950 THEMISQ8N1K5 641 aaPredicted RBP12.64□□□□□ -0.39
SCAF11-205ENST00000465950 UACAQ9BZF9 1416 aa12.63□□□□□ -0.39
SCAF11-205ENST00000465950 EVA1CP58658 441 aa12.6□□□□□ -0.39
SCAF11-205ENST00000465950 GOLGA2Q08379 1002 aa12.6□□□□□ -0.39
SCAF11-205ENST00000465950 RRP7BPQ9NSQ0 103 aa12.59□□□□□ -0.39
SCAF11-205ENST00000465950 SRPK2P78362 688 aaKnown RBP12.59□□□□□ -0.39
SCAF11-205ENST00000465950 MYH16Q9H6N6 1097 aa12.58□□□□□ -0.4
SCAF11-205ENST00000465950 PAK3O75914 559 aaPredicted RBP12.57□□□□□ -0.4
SCAF11-205ENST00000465950 EIF5BO60841 1220 aaKnown RBP12.56□□□□□ -0.4
SCAF11-205ENST00000465950 NGDNQ8NEJ9 315 aaKnown RBP12.56□□□□□ -0.4
SCAF11-205ENST00000465950 VGFO15240 615 aaPredicted RBP12.56□□□□□ -0.4
SCAF11-205ENST00000465950 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.56□□□□□ -0.4
SCAF11-205ENST00000465950 EIF3AQ14152 1382 aaKnown RBP12.56□□□□□ -0.4
SCAF11-205ENST00000465950 PSME1Q06323 249 aa12.56□□□□□ -0.4
SCAF11-205ENST00000465950 RGL3Q3MIN7 710 aa12.56□□□□□ -0.4
SCAF11-205ENST00000465950 ANKLE2Q86XL3 938 aa12.55□□□□□ -0.4
SCAF11-205ENST00000465950 SYNJ2O15056 1496 aa12.55□□□□□ -0.4
SCAF11-205ENST00000465950 CHMP4BQ9H444 224 aaKnown RBP12.54□□□□□ -0.4
SCAF11-205ENST00000465950 ZNF316A6NFI3 1004 aaPredicted RBP12.54□□□□□ -0.4
SCAF11-205ENST00000465950 KNSTRNQ9Y448 316 aa12.53□□□□□ -0.4
SCAF11-205ENST00000465950 TEX14Q8IWB6 1497 aa12.53□□□□□ -0.4
SCAF11-205ENST00000465950 PRG4Q92954 1404 aaPredicted RBP12.53□□□□□ -0.4
SCAF11-205ENST00000465950 MAPK8IP3Q9UPT6 1336 aa12.53□□□□□ -0.4
SCAF11-205ENST00000465950 SYNJ1O43426 1573 aa12.53□□□□□ -0.4
SCAF11-205ENST00000465950 G3V3G9 751 aa12.52□□□□□ -0.4
SCAF11-205ENST00000465950 DCAF8Q5TAQ9 597 aa12.52□□□□□ -0.4
SCAF11-205ENST00000465950 PHLDB1Q86UU1 1377 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms