RNA–Protein interactions for RNA: ENST00000464138.1

SSR3-203, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 533 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-203ENST00000464138 CHRM1P11229 460 aaPredicted RBP13.48□□□□□ -0.25
SSR3-203ENST00000464138 RASEFQ8IZ41 740 aa13.48□□□□□ -0.25
SSR3-203ENST00000464138 HAP1P54257 671 aaPredicted RBP13.47□□□□□ -0.25
SSR3-203ENST00000464138 RIOK3O14730 519 aaKnown RBP13.45□□□□□ -0.26
SSR3-203ENST00000464138 HS6ST3Q8IZP7 471 aa13.43□□□□□ -0.26
SSR3-203ENST00000464138 RNF25Q96BH1 459 aaPredicted RBP13.43□□□□□ -0.26
SSR3-203ENST00000464138 CHADLQ6NUI6 762 aa13.41□□□□□ -0.26
SSR3-203ENST00000464138 FARP1Q9Y4F1 1045 aaPredicted RBP13.41□□□□□ -0.26
SSR3-203ENST00000464138 PAXIP1Q6ZW49 1069 aaPredicted RBP13.4□□□□□ -0.26
SSR3-203ENST00000464138 SPRYD3Q8NCJ5 442 aa13.39□□□□□ -0.27
SSR3-203ENST00000464138 PRKAR2AP13861 404 aaKnown RBP13.38□□□□□ -0.27
SSR3-203ENST00000464138 FXR2P51116 673 aaKnown RBP eCLIP13.38□□□□□ -0.27
SSR3-203ENST00000464138 VGFO15240 615 aaPredicted RBP13.36□□□□□ -0.27
SSR3-203ENST00000464138 CFAP44Q96MT7 982 aa13.36□□□□□ -0.27
SSR3-203ENST00000464138 VSIG10Q8N0Z9 540 aa13.35□□□□□ -0.27
SSR3-203ENST00000464138 DNAJC5Q9H3Z4 198 aa13.35□□□□□ -0.27
SSR3-203ENST00000464138 CHRDL2Q6WN34 429 aa13.34□□□□□ -0.27
SSR3-203ENST00000464138 PYGBP11216 843 aa13.32□□□□□ -0.28
SSR3-203ENST00000464138 SGIP1Q9BQI5 828 aa13.31□□□□□ -0.28
SSR3-203ENST00000464138 TSPYL2Q9H2G4 693 aaPredicted RBP13.3□□□□□ -0.28
SSR3-203ENST00000464138 STK25O00506 426 aa13.27□□□□□ -0.29
SSR3-203ENST00000464138 PAK3O75914 559 aaPredicted RBP13.26□□□□□ -0.29
SSR3-203ENST00000464138 ZNF467Q7Z7K2 595 aaPredicted RBP13.25□□□□□ -0.29
SSR3-203ENST00000464138 PIP4P2Q8N4L2 257 aa13.24□□□□□ -0.29
SSR3-203ENST00000464138 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.2□□□□□ -0.3
SSR3-203ENST00000464138 ZFP91Q96JP5 570 aaPredicted RBP13.2□□□□□ -0.3
SSR3-203ENST00000464138 CCDC61Q9Y6R9 512 aa13.19□□□□□ -0.3
SSR3-203ENST00000464138 BCL11BQ9C0K0 894 aaPredicted RBP13.18□□□□□ -0.3
SSR3-203ENST00000464138 RYDENQ9NUL5 291 aaKnown RBP13.18□□□□□ -0.3
SSR3-203ENST00000464138 STK24Q9Y6E0 443 aa13.18□□□□□ -0.3
SSR3-203ENST00000464138 PDAP1Q13442 181 aaKnown RBP13.15□□□□□ -0.3
SSR3-203ENST00000464138 NKX1-1Q15270 411 aaPredicted RBP13.15□□□□□ -0.3
SSR3-203ENST00000464138 TSHZ2Q9NRE2 1034 aa13.14□□□□□ -0.31
SSR3-203ENST00000464138 ZNF579Q8NAF0 562 aaKnown RBP13.13□□□□□ -0.31
SSR3-203ENST00000464138 KDM2AQ9Y2K7 1162 aa13.11□□□□□ -0.31
SSR3-203ENST00000464138 GTPBP6O43824 516 aaPredicted RBP13.1□□□□□ -0.31
SSR3-203ENST00000464138 BCANQ96GW7 911 aa13.09□□□□□ -0.31
SSR3-203ENST00000464138 PCDHB8Q9UN66 801 aa13.07□□□□□ -0.32
SSR3-203ENST00000464138 PCDHB13Q9Y5F0 798 aa13.07□□□□□ -0.32
SSR3-203ENST00000464138 PSEN1P49768 467 aa13.04□□□□□ -0.32
SSR3-203ENST00000464138 CD44P16070 742 aaKnown RBP13.03□□□□□ -0.32
SSR3-203ENST00000464138 KIF12Q96FN5 646 aa13.03□□□□□ -0.32
SSR3-203ENST00000464138 ZRANB1Q9UGI0 708 aa13.03□□□□□ -0.32
SSR3-203ENST00000464138 MAP3K13O43283 966 aa13.01□□□□□ -0.33
SSR3-203ENST00000464138 IFNL1Q8IU54 200 aa12.99□□□□□ -0.33
SSR3-203ENST00000464138 C19orf67A6NJJ6 358 aa12.9□□□□□ -0.34
SSR3-203ENST00000464138 PHF12Q96QT6 1004 aa12.9□□□□□ -0.34
SSR3-203ENST00000464138 SOX12O15370 315 aa12.87□□□□□ -0.35
SSR3-203ENST00000464138 MFRPQ9BY79 579 aa12.86□□□□□ -0.35
SSR3-203ENST00000464138 CABP2Q9NPB3 220 aa12.86□□□□□ -0.35
SSR3-203ENST00000464138 NLRP6P59044 892 aa12.85□□□□□ -0.35
SSR3-203ENST00000464138 EFCAB3Q8N7B9 438 aa12.83□□□□□ -0.36
SSR3-203ENST00000464138 GOLGA2Q08379 1002 aa12.79□□□□□ -0.36
SSR3-203ENST00000464138 NBR1Q14596 966 aa12.79□□□□□ -0.36
SSR3-203ENST00000464138 CLCN6P51797 869 aa12.78□□□□□ -0.36
SSR3-203ENST00000464138 TMEM106CQ9BVX2 250 aa12.78□□□□□ -0.36
SSR3-203ENST00000464138 FBXO22Q8NEZ5 403 aa12.77□□□□□ -0.37
SSR3-203ENST00000464138 MS4A3Q96HJ5 214 aa12.77□□□□□ -0.37
SSR3-203ENST00000464138 PHF8Q9UPP1 1060 aa12.75□□□□□ -0.37
SSR3-203ENST00000464138 TIE1P35590 1138 aa12.74□□□□□ -0.37
SSR3-203ENST00000464138 P3H3Q8IVL6 736 aa12.72□□□□□ -0.37
SSR3-203ENST00000464138 WDR70Q9NW82 654 aa12.72□□□□□ -0.37
SSR3-203ENST00000464138 HAX1O00165 279 aa12.71□□□□□ -0.37
SSR3-203ENST00000464138 MKRN3Q13064 507 aaKnown RBP12.71□□□□□ -0.37
SSR3-203ENST00000464138 CADPS2Q86UW7 1296 aa12.68□□□□□ -0.38
SSR3-203ENST00000464138 PPP1R37O75864 691 aa12.67□□□□□ -0.38
SSR3-203ENST00000464138 TRPC6Q9Y210 931 aa12.67□□□□□ -0.38
SSR3-203ENST00000464138 TTLL13PA6NNM8 815 aa12.65□□□□□ -0.38
SSR3-203ENST00000464138 MS4A4AQ96JQ5 239 aa12.62□□□□□ -0.39
SSR3-203ENST00000464138 BMP2KQ9NSY1 1161 aaPredicted RBP12.61□□□□□ -0.39
SSR3-203ENST00000464138 ABCC9O60706 1549 aa12.61□□□□□ -0.39
SSR3-203ENST00000464138 GALR2O43603 387 aaPredicted RBP12.6□□□□□ -0.39
SSR3-203ENST00000464138 ILDR1Q86SU0 546 aaPredicted RBP12.57□□□□□ -0.4
SSR3-203ENST00000464138 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.57□□□□□ -0.4
SSR3-203ENST00000464138 TRIM35Q9UPQ4 493 aa12.57□□□□□ -0.4
SSR3-203ENST00000464138 TPRNQ4KMQ1 711 aa12.56□□□□□ -0.4
SSR3-203ENST00000464138 PDE4AP27815 886 aa12.55□□□□□ -0.4
SSR3-203ENST00000464138 EVX2Q03828 476 aa12.54□□□□□ -0.4
SSR3-203ENST00000464138 KCNV2Q8TDN2 545 aa12.54□□□□□ -0.4
SSR3-203ENST00000464138 PRKCSHP14314 528 aaPredicted RBP12.53□□□□□ -0.4
SSR3-203ENST00000464138 E2F4Q16254 413 aa12.51□□□□□ -0.41
SSR3-203ENST00000464138 NCKAP5LQ9HCH0 1330 aa12.49□□□□□ -0.41
SSR3-203ENST00000464138 ARHGEF1Q92888 912 aaKnown RBP12.49□□□□□ -0.41
SSR3-203ENST00000464138 LARP6Q9BRS8 491 aaKnown RBP12.49□□□□□ -0.41
SSR3-203ENST00000464138 IER5LQ5T953 404 aa12.48□□□□□ -0.41
SSR3-203ENST00000464138 ASTLQ6HA08 431 aaPredicted RBP12.48□□□□□ -0.41
SSR3-203ENST00000464138 CRISPLD2Q9H0B8 497 aa12.48□□□□□ -0.41
SSR3-203ENST00000464138 MFSD10Q14728 455 aa12.47□□□□□ -0.41
SSR3-203ENST00000464138 ATMINO43313 823 aaPredicted RBP12.46□□□□□ -0.41
SSR3-203ENST00000464138 ATN1P54259 1190 aaPredicted RBP12.46□□□□□ -0.41
SSR3-203ENST00000464138 DDX27Q96GQ7 796 aaKnown RBP12.45□□□□□ -0.42
SSR3-203ENST00000464138 CCDC180Q9P1Z9 1646 aa12.43□□□□□ -0.42
SSR3-203ENST00000464138 OCEL1Q9H607 264 aa12.42□□□□□ -0.42
SSR3-203ENST00000464138 TULP1O00294 542 aaPredicted RBP12.41□□□□□ -0.42
SSR3-203ENST00000464138 GABBR2O75899 941 aa12.4□□□□□ -0.42
SSR3-203ENST00000464138 IRX5P78411 483 aaPredicted RBP12.4□□□□□ -0.42
SSR3-203ENST00000464138 PDCD7Q8N8D1 485 aaKnown RBP12.4□□□□□ -0.42
SSR3-203ENST00000464138 GPHNQ9NQX3 736 aaPredicted RBP12.39□□□□□ -0.43
SSR3-203ENST00000464138 G3V3G9 751 aa12.38□□□□□ -0.43
SSR3-203ENST00000464138 PLCG2P16885 1265 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms