RNA–Protein interactions for RNA: ENST00000460872.1

ABCA9-203, Transcript of ATP binding cassette subfamily A member 9, humanhuman

TSL 5

Gene ABCA9, Length 635 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9-203ENST00000460872 PLEKHG5O94827 1062 aa9.95□□□□□ -0.82
ABCA9-203ENST00000460872 PRKCSHP14314 528 aaPredicted RBP9.95□□□□□ -0.82
ABCA9-203ENST00000460872 TAOK2Q9UL54 1235 aa9.95□□□□□ -0.82
ABCA9-203ENST00000460872 CHGAP10645 457 aaKnown RBP9.94□□□□□ -0.82
ABCA9-203ENST00000460872 AKT1S1Q96B36 256 aa9.94□□□□□ -0.82
ABCA9-203ENST00000460872 TSHZ2Q9NRE2 1034 aa9.93□□□□□ -0.82
ABCA9-203ENST00000460872 TRIM41Q8WV44 630 aa9.92□□□□□ -0.82
ABCA9-203ENST00000460872 BICRAQ9NZM4 1560 aa9.9□□□□□ -0.82
ABCA9-203ENST00000460872 RNF25Q96BH1 459 aaPredicted RBP9.9□□□□□ -0.82
ABCA9-203ENST00000460872 NUBP1P53384 320 aa9.88□□□□□ -0.83
ABCA9-203ENST00000460872 HS6ST3Q8IZP7 471 aa9.88□□□□□ -0.83
ABCA9-203ENST00000460872 SHROOM4Q9ULL8 1493 aa9.87□□□□□ -0.83
ABCA9-203ENST00000460872 REM2Q8IYK8 340 aaPredicted RBP9.86□□□□□ -0.83
ABCA9-203ENST00000460872 SPDYE1Q8NFV5 336 aaPredicted RBP9.86□□□□□ -0.83
ABCA9-203ENST00000460872 DNAJC5Q9H3Z4 198 aa9.85□□□□□ -0.83
ABCA9-203ENST00000460872 GSE1Q14687 1217 aa9.84□□□□□ -0.83
ABCA9-203ENST00000460872 CLEC11AQ9Y240 323 aa9.8□□□□□ -0.84
ABCA9-203ENST00000460872 MNX1P50219 401 aaPredicted RBP9.79□□□□□ -0.84
ABCA9-203ENST00000460872 TPRNQ4KMQ1 711 aa9.79□□□□□ -0.84
ABCA9-203ENST00000460872 NKX1-1Q15270 411 aaPredicted RBP9.78□□□□□ -0.84
ABCA9-203ENST00000460872 CREBZFQ9NS37 354 aa9.78□□□□□ -0.84
ABCA9-203ENST00000460872 RIOK3O14730 519 aaKnown RBP9.76□□□□□ -0.85
ABCA9-203ENST00000460872 PRR29P0C7W0 189 aa9.75□□□□□ -0.85
ABCA9-203ENST00000460872 DCAF8Q5TAQ9 597 aa9.75□□□□□ -0.85
ABCA9-203ENST00000460872 PITPNM1O00562 1244 aa9.74□□□□□ -0.85
ABCA9-203ENST00000460872 GTPBP6O43824 516 aaPredicted RBP9.72□□□□□ -0.85
ABCA9-203ENST00000460872 FAM212AQ96EL1 285 aa9.71□□□□□ -0.86
ABCA9-203ENST00000460872 CHRM1P11229 460 aaPredicted RBP9.7□□□□□ -0.86
ABCA9-203ENST00000460872 RASEFQ8IZ41 740 aa9.7□□□□□ -0.86
ABCA9-203ENST00000460872 VGFO15240 615 aaPredicted RBP9.68□□□□□ -0.86
ABCA9-203ENST00000460872 STK25O00506 426 aa9.67□□□□□ -0.86
ABCA9-203ENST00000460872 SGIP1Q9BQI5 828 aa9.67□□□□□ -0.86
ABCA9-203ENST00000460872 EIF4G1Q04637 1599 aaKnown RBP9.65□□□□□ -0.86
ABCA9-203ENST00000460872 NBR1Q14596 966 aa9.63□□□□□ -0.87
ABCA9-203ENST00000460872 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.61□□□□□ -0.87
ABCA9-203ENST00000460872 ZFP91Q96JP5 570 aaPredicted RBP9.61□□□□□ -0.87
ABCA9-203ENST00000460872 BCL11BQ9C0K0 894 aaPredicted RBP9.6□□□□□ -0.87
ABCA9-203ENST00000460872 CC2D2AQ9P2K1 1620 aa9.6□□□□□ -0.87
ABCA9-203ENST00000460872 SMARCA4P51532 1647 aa9.58□□□□□ -0.88
ABCA9-203ENST00000460872 PYGBP11216 843 aa9.58□□□□□ -0.88
ABCA9-203ENST00000460872 STK24Q9Y6E0 443 aa9.58□□□□□ -0.88
ABCA9-203ENST00000460872 CECR2Q9BXF3 1484 aa9.58□□□□□ -0.88
ABCA9-203ENST00000460872 CHADLQ6NUI6 762 aa9.56□□□□□ -0.88
ABCA9-203ENST00000460872 BAZ1AQ9NRL2 1556 aaPredicted RBP9.55□□□□□ -0.88
ABCA9-203ENST00000460872 RYDENQ9NUL5 291 aaKnown RBP9.52□□□□□ -0.89
ABCA9-203ENST00000460872 FXR2P51116 673 aaKnown RBP eCLIP9.51□□□□□ -0.89
ABCA9-203ENST00000460872 MROH2BQ7Z745 1585 aa9.5□□□□□ -0.89
ABCA9-203ENST00000460872 PRKAR2AP13861 404 aaKnown RBP9.49□□□□□ -0.89
ABCA9-203ENST00000460872 CHRDL2Q6WN34 429 aa9.49□□□□□ -0.89
ABCA9-203ENST00000460872 FARP1Q9Y4F1 1045 aaPredicted RBP9.49□□□□□ -0.89
ABCA9-203ENST00000460872 WIZO95785 1651 aa9.47□□□□□ -0.89
ABCA9-203ENST00000460872 ZNF467Q7Z7K2 595 aaPredicted RBP9.45□□□□□ -0.9
ABCA9-203ENST00000460872 SMARCA2P51531 1590 aa9.45□□□□□ -0.9
ABCA9-203ENST00000460872 PIP4P2Q8N4L2 257 aa9.44□□□□□ -0.9
ABCA9-203ENST00000460872 TSPYL2Q9H2G4 693 aaPredicted RBP9.44□□□□□ -0.9
ABCA9-203ENST00000460872 ATAD2BQ9ULI0 1458 aa9.43□□□□□ -0.9
ABCA9-203ENST00000460872 CADPS2Q86UW7 1296 aa9.43□□□□□ -0.9
ABCA9-203ENST00000460872 PDAP1Q13442 181 aaKnown RBP9.42□□□□□ -0.9
ABCA9-203ENST00000460872 PEG3Q9GZU2 1588 aa9.41□□□□□ -0.9
ABCA9-203ENST00000460872 BAZ1BQ9UIG0 1483 aaKnown RBP9.4□□□□□ -0.9
ABCA9-203ENST00000460872 PCDHB8Q9UN66 801 aa9.4□□□□□ -0.9
ABCA9-203ENST00000460872 PCDHB13Q9Y5F0 798 aa9.4□□□□□ -0.9
ABCA9-203ENST00000460872 CCDC61Q9Y6R9 512 aa9.4□□□□□ -0.9
ABCA9-203ENST00000460872 HMGXB3Q12766 1538 aa9.4□□□□□ -0.91
ABCA9-203ENST00000460872 RSF1Q96T23 1441 aaPredicted RBP9.39□□□□□ -0.91
ABCA9-203ENST00000460872 P3H3Q8IVL6 736 aa9.39□□□□□ -0.91
ABCA9-203ENST00000460872 KCNV2Q8TDN2 545 aa9.38□□□□□ -0.91
ABCA9-203ENST00000460872 MFRPQ9BY79 579 aa9.38□□□□□ -0.91
ABCA9-203ENST00000460872 NCAPD3P42695 1498 aa9.37□□□□□ -0.91
ABCA9-203ENST00000460872 PSEN1P49768 467 aa9.36□□□□□ -0.91
ABCA9-203ENST00000460872 ZNF579Q8NAF0 562 aaKnown RBP9.36□□□□□ -0.91
ABCA9-203ENST00000460872 TOP2AP11388 1531 aaKnown RBP9.33□□□□□ -0.92
ABCA9-203ENST00000460872 SUPT5HO00267 1087 aaKnown RBP9.32□□□□□ -0.92
ABCA9-203ENST00000460872 FBXO22Q8NEZ5 403 aa9.3□□□□□ -0.92
ABCA9-203ENST00000460872 WDR70Q9NW82 654 aa9.3□□□□□ -0.92
ABCA9-203ENST00000460872 PPP1R37O75864 691 aa9.29□□□□□ -0.92
ABCA9-203ENST00000460872 IFNL1Q8IU54 200 aa9.29□□□□□ -0.92
ABCA9-203ENST00000460872 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.28□□□□□ -0.92
ABCA9-203ENST00000460872 PAK3O75914 559 aaPredicted RBP9.27□□□□□ -0.93
ABCA9-203ENST00000460872 MAP3K13O43283 966 aa9.26□□□□□ -0.93
ABCA9-203ENST00000460872 LMOD2Q6P5Q4 547 aa9.26□□□□□ -0.93
ABCA9-203ENST00000460872 KIF12Q96FN5 646 aa9.26□□□□□ -0.93
ABCA9-203ENST00000460872 EFCAB3Q8N7B9 438 aa9.25□□□□□ -0.93
ABCA9-203ENST00000460872 PHF8Q9UPP1 1060 aa9.24□□□□□ -0.93
ABCA9-203ENST00000460872 CD44P16070 742 aaKnown RBP9.23□□□□□ -0.93
ABCA9-203ENST00000460872 NLRP6P59044 892 aa9.23□□□□□ -0.93
ABCA9-203ENST00000460872 CABP2Q9NPB3 220 aa9.23□□□□□ -0.93
ABCA9-203ENST00000460872 SOX12O15370 315 aa9.22□□□□□ -0.93
ABCA9-203ENST00000460872 ZRANB1Q9UGI0 708 aa9.22□□□□□ -0.93
ABCA9-203ENST00000460872 TIMELESSQ9UNS1 1208 aa9.22□□□□□ -0.93
ABCA9-203ENST00000460872 ARHGEF1Q92888 912 aaKnown RBP9.21□□□□□ -0.94
ABCA9-203ENST00000460872 GTF3C3Q9Y5Q9 886 aa9.2□□□□□ -0.94
ABCA9-203ENST00000460872 NESP48681 1621 aa9.2□□□□□ -0.94
ABCA9-203ENST00000460872 E2F4Q16254 413 aa9.19□□□□□ -0.94
ABCA9-203ENST00000460872 TMEM132AQ24JP5 1023 aa9.19□□□□□ -0.94
ABCA9-203ENST00000460872 CCDC88BA6NC98 1476 aa9.19□□□□□ -0.94
ABCA9-203ENST00000460872 PRDM2Q13029 1718 aa9.19□□□□□ -0.94
ABCA9-203ENST00000460872 NCKAP5LQ9HCH0 1330 aa9.18□□□□□ -0.94
ABCA9-203ENST00000460872 LAMC3Q9Y6N6 1575 aa9.18□□□□□ -0.94
ABCA9-203ENST00000460872 C19orf67A6NJJ6 358 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms