RNA–Protein interactions for RNA: ENST00000460469.1

NMD3-202, Transcript of NMD3 ribosome export adaptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NMD3, Length 3,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3-202ENST00000460469 RAD54L2Q9Y4B4 1467 aa25.08■■□□□ 1.61
NMD3-202ENST00000460469 DDX10Q13206 875 aaKnown RBP25.06■■□□□ 1.6
NMD3-202ENST00000460469 FHOD3Q2V2M9 1422 aa25.06■■□□□ 1.6
NMD3-202ENST00000460469 MAPKBP1O60336 1514 aa25.03■■□□□ 1.6
NMD3-202ENST00000460469 TIAM1Q13009 1591 aa25.02■■□□□ 1.6
NMD3-202ENST00000460469 LRRC9Q6ZRR7 1453 aa25.02■■□□□ 1.6
NMD3-202ENST00000460469 SUPT16HQ9Y5B9 1047 aaKnown RBP25.01■■□□□ 1.6
NMD3-202ENST00000460469 SETD5Q9C0A6 1442 aa24.99■■□□□ 1.59
NMD3-202ENST00000460469 NESP48681 1621 aa24.98■■□□□ 1.59
NMD3-202ENST00000460469 FANCD2Q9BXW9 1451 aa24.95■■□□□ 1.59
NMD3-202ENST00000460469 BCANQ96GW7 911 aa24.92■■□□□ 1.58
NMD3-202ENST00000460469 DNAJC5BQ9UF47 199 aa24.91■■□□□ 1.58
NMD3-202ENST00000460469 WDR97A6NE52 1622 aa24.91■■□□□ 1.58
NMD3-202ENST00000460469 PCF11O94913 1555 aaKnown RBP24.9■■□□□ 1.58
NMD3-202ENST00000460469 CC2D2AQ9P2K1 1620 aa24.88■■□□□ 1.57
NMD3-202ENST00000460469 TDRD9Q8NDG6 1382 aaKnown RBP24.85■■□□□ 1.57
NMD3-202ENST00000460469 FHAD1B1AJZ9 1412 aa24.84■■□□□ 1.57
NMD3-202ENST00000460469 ARID3CA6NKF2 412 aa24.84■■□□□ 1.57
NMD3-202ENST00000460469 POLA1P09884 1462 aaPredicted RBP24.82■■□□□ 1.56
NMD3-202ENST00000460469 TRIM52Q96A61 297 aa24.79■■□□□ 1.56
NMD3-202ENST00000460469 PRDM2Q13029 1718 aa24.78■■□□□ 1.56
NMD3-202ENST00000460469 TOPBP1Q92547 1522 aa24.76■■□□□ 1.55
NMD3-202ENST00000460469 PPP1R15AO75807 674 aaPredicted RBP24.74■■□□□ 1.55
NMD3-202ENST00000460469 MAP3K1Q13233 1512 aa24.74■■□□□ 1.55
NMD3-202ENST00000460469 CHIC2Q9UKJ5 165 aa24.74■■□□□ 1.55
NMD3-202ENST00000460469 MTUS2Q5JR59 1369 aa24.72■■□□□ 1.55
NMD3-202ENST00000460469 PTPRKQ15262 1439 aa24.71■■□□□ 1.55
NMD3-202ENST00000460469 ABCA10Q8WWZ4 1543 aa24.68■■□□□ 1.54
NMD3-202ENST00000460469 FKBP8Q14318 412 aa24.67■■□□□ 1.54
NMD3-202ENST00000460469 RRP7BPQ9NSQ0 103 aa24.67■■□□□ 1.54
NMD3-202ENST00000460469 CASKIN1Q8WXD9 1431 aa24.67■■□□□ 1.54
NMD3-202ENST00000460469 DNMBPQ6XZF7 1577 aa24.65■■□□□ 1.54
NMD3-202ENST00000460469 FGD6Q6ZV73 1430 aa24.64■■□□□ 1.54
NMD3-202ENST00000460469 CFAP43Q8NDM7 1665 aa24.64■■□□□ 1.54
NMD3-202ENST00000460469 FYCO1Q9BQS8 1478 aa24.63■■□□□ 1.53
NMD3-202ENST00000460469 TSHZ2Q9NRE2 1034 aa24.63■■□□□ 1.53
NMD3-202ENST00000460469 TONSLQ96HA7 1378 aa24.62■■□□□ 1.53
NMD3-202ENST00000460469 URB2Q14146 1524 aaKnown RBP24.6■■□□□ 1.53
NMD3-202ENST00000460469 ANP32CO43423 234 aa24.57■■□□□ 1.52
NMD3-202ENST00000460469 CCDC18Q5T9S5 1454 aa24.57■■□□□ 1.52
NMD3-202ENST00000460469 FOXD1Q16676 465 aa24.56■■□□□ 1.52
NMD3-202ENST00000460469 AQRO60306 1485 aaKnown RBP eCLIP24.56■■□□□ 1.523e-7■■■■□ 23.5
NMD3-202ENST00000460469 FMN1Q68DA7 1419 aa24.55■■□□□ 1.52
NMD3-202ENST00000460469 SNAPC4Q5SXM2 1469 aa24.55■■□□□ 1.52
NMD3-202ENST00000460469 NCOA2Q15596 1464 aa24.5■■□□□ 1.51
NMD3-202ENST00000460469 EFCAB5A4FU69 1503 aa24.5■■□□□ 1.51
NMD3-202ENST00000460469 GAPVD1Q14C86 1478 aa24.49■■□□□ 1.51
NMD3-202ENST00000460469 TIMELESSQ9UNS1 1208 aa24.47■■□□□ 1.51
NMD3-202ENST00000460469 NAIPQ13075 1403 aa24.47■■□□□ 1.51
NMD3-202ENST00000460469 CTTNBP2Q8WZ74 1663 aa24.45■■□□□ 1.5
NMD3-202ENST00000460469 HFM1A2PYH4 1435 aa24.44■■□□□ 1.5
NMD3-202ENST00000460469 LRRIQ1Q96JM4 1722 aa24.44■■□□□ 1.5
NMD3-202ENST00000460469 IRX6P78412 446 aaPredicted RBP24.43■■□□□ 1.5
NMD3-202ENST00000460469 MYOM3Q5VTT5 1437 aa24.43■■□□□ 1.5
NMD3-202ENST00000460469 CUL7Q14999 1698 aa24.42■■□□□ 1.5
NMD3-202ENST00000460469 UACAQ9BZF9 1416 aa24.42■■□□□ 1.5
NMD3-202ENST00000460469 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.41■■□□□ 1.5
NMD3-202ENST00000460469 MAGI3Q5TCQ9 1506 aa24.4■■□□□ 1.5
NMD3-202ENST00000460469 CNGB1Q14028 1251 aaPredicted RBP24.4■■□□□ 1.5
NMD3-202ENST00000460469 PTPN23Q9H3S7 1636 aa24.39■■□□□ 1.5
NMD3-202ENST00000460469 GRIN2BQ13224 1484 aa24.37■■□□□ 1.49
NMD3-202ENST00000460469 HSPA5P11021 654 aaKnown RBP24.37■■□□□ 1.49
NMD3-202ENST00000460469 HNRNPUQ00839 825 aaKnown RBP eCLIP24.36■■□□□ 1.49
NMD3-202ENST00000460469 CCER2I3L3R5 266 aa24.34■■□□□ 1.49
NMD3-202ENST00000460469 NEFLP07196 543 aa24.34■■□□□ 1.49
NMD3-202ENST00000460469 CCDC184Q52MB2 194 aa24.33■■□□□ 1.49
NMD3-202ENST00000460469 WASHC2AQ641Q2 1341 aa24.33■■□□□ 1.49
NMD3-202ENST00000460469 ZNF644Q9H582 1327 aaPredicted RBP24.33■■□□□ 1.48
NMD3-202ENST00000460469 CDK13Q14004 1512 aaKnown RBP24.3■■□□□ 1.48
NMD3-202ENST00000460469 SAMD9Q5K651 1589 aa24.3■■□□□ 1.48
NMD3-202ENST00000460469 C11orf95C9JLR9 678 aaPredicted RBP24.3■■□□□ 1.48
NMD3-202ENST00000460469 ABCA5Q8WWZ7 1642 aa24.3■■□□□ 1.48
NMD3-202ENST00000460469 L3MBTL2Q969R5 705 aa24.29■■□□□ 1.48
NMD3-202ENST00000460469 KDM6BO15054 1643 aa24.29■■□□□ 1.48
NMD3-202ENST00000460469 MPHOSPH9Q99550 1183 aa24.29■■□□□ 1.48
NMD3-202ENST00000460469 PDS5BQ9NTI5 1447 aa24.27■■□□□ 1.48
NMD3-202ENST00000460469 DENND4BO75064 1496 aaPredicted RBP24.27■■□□□ 1.48
NMD3-202ENST00000460469 SENP3-EIF4A1A0A087X0R7 540 aa24.26■■□□□ 1.47
NMD3-202ENST00000460469 MYT1Q01538 1121 aa24.26■■□□□ 1.47
NMD3-202ENST00000460469 KDM5BQ9UGL1 1544 aa24.25■■□□□ 1.47
NMD3-202ENST00000460469 LAMC3Q9Y6N6 1575 aa24.24■■□□□ 1.47
NMD3-202ENST00000460469 SUPT6HQ7KZ85 1726 aaKnown RBP24.23■■□□□ 1.47
NMD3-202ENST00000460469 UGGT2Q9NYU1 1516 aa24.22■■□□□ 1.47
NMD3-202ENST00000460469 KIF21AQ7Z4S6 1674 aa24.22■■□□□ 1.47
NMD3-202ENST00000460469 EHBP1L1Q8N3D4 1523 aa24.2■■□□□ 1.46
NMD3-202ENST00000460469 FAM9BQ8IZU0 186 aa24.19■■□□□ 1.46
NMD3-202ENST00000460469 EIF4G2P78344 907 aaKnown RBP eCLIP24.19■■□□□ 1.46
NMD3-202ENST00000460469 NBPF8Q3BBV2 869 aa24.19■■□□□ 1.46
NMD3-202ENST00000460469 EPRSP07814 1512 aaKnown RBP24.18■■□□□ 1.46
NMD3-202ENST00000460469 POLR3GLQ9BT43 218 aa24.16■■□□□ 1.46
NMD3-202ENST00000460469 RBM19Q9Y4C8 960 aaKnown RBP24.16■■□□□ 1.46
NMD3-202ENST00000460469 ZNF326Q5BKZ1 582 aaKnown RBP24.15■■□□□ 1.46
NMD3-202ENST00000460469 ZNF777Q9ULD5 760 aaPredicted RBP24.15■■□□□ 1.46
NMD3-202ENST00000460469 THOC2Q8NI27 1593 aaKnown RBP24.14■■□□□ 1.45
NMD3-202ENST00000460469 SLC4A1APQ9BWU0 796 aaKnown RBP24.13■■□□□ 1.45
NMD3-202ENST00000460469 TARBP1Q13395 1621 aaKnown RBP24.12■■□□□ 1.45
NMD3-202ENST00000460469 ZNF608Q9ULD9 1512 aaPredicted RBP24.11■■□□□ 1.45
NMD3-202ENST00000460469 ARHGEF11O15085 1522 aa24.11■■□□□ 1.45
NMD3-202ENST00000460469 FBLN2P98095 1184 aa24.11■■□□□ 1.45
NMD3-202ENST00000460469 IQGAP2Q13576 1575 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms