RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 RAPGEF2Q9Y4G8 1499 aa13.9□□□□□ -0.18
UFD1-205ENST00000459854 IGF1RP08069 1367 aa13.9□□□□□ -0.19
UFD1-205ENST00000459854 DIEXFQ68CQ4 756 aaKnown RBP13.88□□□□□ -0.19
UFD1-205ENST00000459854 THOC2Q8NI27 1593 aaKnown RBP13.87□□□□□ -0.19
UFD1-205ENST00000459854 P3H3Q8IVL6 736 aa13.87□□□□□ -0.19
UFD1-205ENST00000459854 NPM1P06748 294 aaKnown RBP eCLIP13.87□□□□□ -0.19
UFD1-205ENST00000459854 ZNF316A6NFI3 1004 aaPredicted RBP13.86□□□□□ -0.19
UFD1-205ENST00000459854 SNAPC4Q5SXM2 1469 aa13.85□□□□□ -0.19
UFD1-205ENST00000459854 ZNF608Q9ULD9 1512 aaPredicted RBP13.85□□□□□ -0.19
UFD1-205ENST00000459854 MAGI1Q96QZ7 1491 aaPredicted RBP13.84□□□□□ -0.19
UFD1-205ENST00000459854 CARMIL2Q6F5E8 1435 aa13.82□□□□□ -0.2
UFD1-205ENST00000459854 ERICH3Q5RHP9 1530 aa13.81□□□□□ -0.2
UFD1-205ENST00000459854 RUSC2Q8N2Y8 1516 aa13.81□□□□□ -0.2
UFD1-205ENST00000459854 GLIPR1L2Q4G1C9 344 aa13.81□□□□□ -0.2
UFD1-205ENST00000459854 GTF3C3Q9Y5Q9 886 aa13.79□□□□□ -0.2
UFD1-205ENST00000459854 WDR97A6NE52 1622 aa13.79□□□□□ -0.2
UFD1-205ENST00000459854 SYNJ2O15056 1496 aa13.79□□□□□ -0.2
UFD1-205ENST00000459854 TNIKQ9UKE5 1360 aa13.79□□□□□ -0.2
UFD1-205ENST00000459854 JPH4Q96JJ6 628 aa13.78□□□□□ -0.2
UFD1-205ENST00000459854 CDK11AQ9UQ88 783 aaPredicted RBP13.78□□□□□ -0.2
UFD1-205ENST00000459854 CLIP1P30622 1438 aa13.76□□□□□ -0.21
UFD1-205ENST00000459854 CUL7Q14999 1698 aa13.74□□□□□ -0.21
UFD1-205ENST00000459854 EIF4G3O43432 1585 aaKnown RBP13.74□□□□□ -0.21
UFD1-205ENST00000459854 ACIN1Q9UKV3 1341 aaKnown RBP13.73□□□□□ -0.21
UFD1-205ENST00000459854 TARBP1Q13395 1621 aaKnown RBP13.72□□□□□ -0.21
UFD1-205ENST00000459854 GRIN2AQ12879 1464 aa13.7□□□□□ -0.22
UFD1-205ENST00000459854 PRXQ9BXM0 1461 aa13.69□□□□□ -0.22
UFD1-205ENST00000459854 ARID3CA6NKF2 412 aa13.68□□□□□ -0.22
UFD1-205ENST00000459854 CEP162Q5TB80 1403 aa13.68□□□□□ -0.22
UFD1-205ENST00000459854 PPARGC1BQ86YN6 1023 aaKnown RBP13.66□□□□□ -0.22
UFD1-205ENST00000459854 KIF21BO75037 1637 aa13.66□□□□□ -0.22
UFD1-205ENST00000459854 ABCA5Q8WWZ7 1642 aa13.66□□□□□ -0.22
UFD1-205ENST00000459854 KIAA0586Q9BVV6 1533 aa13.65□□□□□ -0.22
UFD1-205ENST00000459854 PTPRGP23470 1445 aa13.63□□□□□ -0.23
UFD1-205ENST00000459854 ADAMTS12P58397 1594 aa13.62□□□□□ -0.23
UFD1-205ENST00000459854 FMN1Q68DA7 1419 aa13.61□□□□□ -0.23
UFD1-205ENST00000459854 PLEKHD1A6NEE1 506 aa13.61□□□□□ -0.23
UFD1-205ENST00000459854 PRG4Q92954 1404 aaPredicted RBP13.61□□□□□ -0.23
UFD1-205ENST00000459854 PBRM1Q86U86 1689 aa13.61□□□□□ -0.23
UFD1-205ENST00000459854 CYB5RLQ6IPT4 315 aa13.6□□□□□ -0.23
UFD1-205ENST00000459854 ANP32AP39687 249 aaKnown RBP13.56□□□□□ -0.24
UFD1-205ENST00000459854 IQGAP2Q13576 1575 aa13.56□□□□□ -0.24
UFD1-205ENST00000459854 MTUS2Q5JR59 1369 aa13.55□□□□□ -0.24
UFD1-205ENST00000459854 FHOD3Q2V2M9 1422 aa13.54□□□□□ -0.24
UFD1-205ENST00000459854 NUP160Q12769 1436 aa13.52□□□□□ -0.24
UFD1-205ENST00000459854 KCNH8Q96L42 1107 aa13.52□□□□□ -0.25
UFD1-205ENST00000459854 EFCAB5A4FU69 1503 aa13.51□□□□□ -0.25
UFD1-205ENST00000459854 TRHP20396 242 aaPredicted RBP13.49□□□□□ -0.25
UFD1-205ENST00000459854 VPS8Q8N3P4 1428 aa13.48□□□□□ -0.25
UFD1-205ENST00000459854 ANP32CO43423 234 aa13.47□□□□□ -0.25
UFD1-205ENST00000459854 FAM50AQ14320 339 aaKnown RBP13.45□□□□□ -0.26
UFD1-205ENST00000459854 ZNF777Q9ULD5 760 aaPredicted RBP13.45□□□□□ -0.26
UFD1-205ENST00000459854 EIF5BO60841 1220 aaKnown RBP13.44□□□□□ -0.26
UFD1-205ENST00000459854 CHD1O14646 1710 aa13.42□□□□□ -0.26
UFD1-205ENST00000459854 ANP32BQ92688 251 aaKnown RBP13.42□□□□□ -0.26
UFD1-205ENST00000459854 ITGAEP38570 1179 aa13.41□□□□□ -0.26
UFD1-205ENST00000459854 UACAQ9BZF9 1416 aa13.41□□□□□ -0.26
UFD1-205ENST00000459854 CEP170Q5SW79 1584 aa13.4□□□□□ -0.26
UFD1-205ENST00000459854 ARHGAP35Q9NRY4 1499 aa13.4□□□□□ -0.26
UFD1-205ENST00000459854 UGGT2Q9NYU1 1516 aa13.4□□□□□ -0.26
UFD1-205ENST00000459854 CTTNBP2Q8WZ74 1663 aa13.39□□□□□ -0.27
UFD1-205ENST00000459854 BCANQ96GW7 911 aa13.39□□□□□ -0.27
UFD1-205ENST00000459854 CCDC18Q5T9S5 1454 aa13.36□□□□□ -0.27
UFD1-205ENST00000459854 CFDP1Q9UEE9 299 aaPredicted RBP13.36□□□□□ -0.27
UFD1-205ENST00000459854 CASKIN1Q8WXD9 1431 aa13.36□□□□□ -0.27
UFD1-205ENST00000459854 CCNB3Q8WWL7 1395 aa13.36□□□□□ -0.27
UFD1-205ENST00000459854 POLR3GLQ9BT43 218 aa13.34□□□□□ -0.27
UFD1-205ENST00000459854 DNAJC5Q9H3Z4 198 aa13.34□□□□□ -0.27
UFD1-205ENST00000459854 ARAP1Q96P48 1450 aa13.33□□□□□ -0.28
UFD1-205ENST00000459854 FYCO1Q9BQS8 1478 aa13.32□□□□□ -0.28
UFD1-205ENST00000459854 TSPY4P0CV99 314 aa13.32□□□□□ -0.28
UFD1-205ENST00000459854 TSPY10P0CW01 314 aa13.32□□□□□ -0.28
UFD1-205ENST00000459854 KIAA0556O60303 1618 aa13.32□□□□□ -0.28
UFD1-205ENST00000459854 FAM69CQ0P6D2 419 aa13.31□□□□□ -0.28
UFD1-205ENST00000459854 EFCAB2Q5VUJ9 269 aa13.31□□□□□ -0.28
UFD1-205ENST00000459854 HECW1Q76N89 1606 aa13.3□□□□□ -0.28
UFD1-205ENST00000459854 PLB1Q6P1J6 1458 aa13.28□□□□□ -0.28
UFD1-205ENST00000459854 ARHGEF11O15085 1522 aa13.28□□□□□ -0.28
UFD1-205ENST00000459854 DISP1Q96F81 1524 aa13.28□□□□□ -0.28
UFD1-205ENST00000459854 ANP32EQ9BTT0 268 aa13.27□□□□□ -0.28
UFD1-205ENST00000459854 ZBTB47Q9UFB7 747 aaPredicted RBP13.27□□□□□ -0.28
UFD1-205ENST00000459854 CLASP1Q7Z460 1538 aa13.27□□□□□ -0.29
UFD1-205ENST00000459854 ESF1Q9H501 851 aaKnown RBP13.23□□□□□ -0.29
UFD1-205ENST00000459854 KANK4Q5T7N3 995 aaPredicted RBP13.22□□□□□ -0.29
UFD1-205ENST00000459854 EPRSP07814 1512 aaKnown RBP13.22□□□□□ -0.29
UFD1-205ENST00000459854 TROQ12816 1431 aaPredicted RBP13.21□□□□□ -0.29
UFD1-205ENST00000459854 RAPGEF6Q8TEU7 1601 aa13.21□□□□□ -0.3
UFD1-205ENST00000459854 SCAF1Q9H7N4 1312 aaKnown RBP13.21□□□□□ -0.3
UFD1-205ENST00000459854 ABCC2Q92887 1545 aa13.21□□□□□ -0.3
UFD1-205ENST00000459854 SAMD9Q5K651 1589 aa13.2□□□□□ -0.3
UFD1-205ENST00000459854 RSPH4AQ5TD94 716 aa13.19□□□□□ -0.3
UFD1-205ENST00000459854 FKBP8Q14318 412 aa13.19□□□□□ -0.3
UFD1-205ENST00000459854 UPF2Q9HAU5 1272 aaKnown RBP13.18□□□□□ -0.3
UFD1-205ENST00000459854 TRIM52Q96A61 297 aa13.18□□□□□ -0.3
UFD1-205ENST00000459854 TNNT2P45379 298 aaPredicted RBP13.18□□□□□ -0.3
UFD1-205ENST00000459854 PCF11O94913 1555 aaKnown RBP13.17□□□□□ -0.3
UFD1-205ENST00000459854 UHRF1BP1LA0JNW5 1464 aa13.16□□□□□ -0.3
UFD1-205ENST00000459854 CDK13Q14004 1512 aaKnown RBP13.16□□□□□ -0.3
UFD1-205ENST00000459854 EHBP1L1Q8N3D4 1523 aa13.16□□□□□ -0.3
UFD1-205ENST00000459854 CHIC2Q9UKJ5 165 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms