RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 SETD5Q9C0A6 1442 aa25.58■■□□□ 1.69
PTPN6-204ENST00000456013 FHAD1B1AJZ9 1412 aa25.57■■□□□ 1.68
PTPN6-204ENST00000456013 PHLDB1Q86UU1 1377 aa25.53■■□□□ 1.68
PTPN6-204ENST00000456013 PCF11O94913 1555 aaKnown RBP25.51■■□□□ 1.67
PTPN6-204ENST00000456013 SUPT16HQ9Y5B9 1047 aaKnown RBP25.46■■□□□ 1.67
PTPN6-204ENST00000456013 FANCD2Q9BXW9 1451 aa25.42■■□□□ 1.66
PTPN6-204ENST00000456013 EFCAB5A4FU69 1503 aa25.41■■□□□ 1.66
PTPN6-204ENST00000456013 FYCO1Q9BQS8 1478 aa25.41■■□□□ 1.66
PTPN6-204ENST00000456013 WDR97A6NE52 1622 aa25.4■■□□□ 1.66
PTPN6-204ENST00000456013 DNMBPQ6XZF7 1577 aa25.4■■□□□ 1.66
PTPN6-204ENST00000456013 FAM50AQ14320 339 aaKnown RBP25.39■■□□□ 1.66
PTPN6-204ENST00000456013 ABCA10Q8WWZ4 1543 aa25.39■■□□□ 1.65
PTPN6-204ENST00000456013 CC2D2AQ9P2K1 1620 aa25.38■■□□□ 1.65
PTPN6-204ENST00000456013 AQRO60306 1485 aaKnown RBP eCLIP25.37■■□□□ 1.65
PTPN6-204ENST00000456013 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.37■■□□□ 1.65
PTPN6-204ENST00000456013 TIMELESSQ9UNS1 1208 aa25.37■■□□□ 1.65
PTPN6-204ENST00000456013 CUL7Q14999 1698 aa25.36■■□□□ 1.65
PTPN6-204ENST00000456013 CTTNBP2Q8WZ74 1663 aa25.36■■□□□ 1.65
PTPN6-204ENST00000456013 CASKIN1Q8WXD9 1431 aa25.35■■□□□ 1.65
PTPN6-204ENST00000456013 FHOD3Q2V2M9 1422 aa25.35■■□□□ 1.65
PTPN6-204ENST00000456013 P3H3Q8IVL6 736 aa25.34■■□□□ 1.65
PTPN6-204ENST00000456013 SIN3AQ96ST3 1273 aa25.33■■□□□ 1.65
PTPN6-204ENST00000456013 RAD54L2Q9Y4B4 1467 aa25.31■■□□□ 1.64
PTPN6-204ENST00000456013 TOPBP1Q92547 1522 aa25.3■■□□□ 1.64
PTPN6-204ENST00000456013 POLA1P09884 1462 aaPredicted RBP25.3■■□□□ 1.64
PTPN6-204ENST00000456013 KCNH8Q96L42 1107 aa25.27■■□□□ 1.64
PTPN6-204ENST00000456013 ATP1B4Q9UN42 357 aaPredicted RBP25.27■■□□□ 1.64
PTPN6-204ENST00000456013 FMN1Q68DA7 1419 aa25.23■■□□□ 1.63
PTPN6-204ENST00000456013 DDX10Q13206 875 aaKnown RBP25.22■■□□□ 1.63
PTPN6-204ENST00000456013 PPP1R15AO75807 674 aaPredicted RBP25.21■■□□□ 1.63
PTPN6-204ENST00000456013 FGD6Q6ZV73 1430 aa25.2■■□□□ 1.63
PTPN6-204ENST00000456013 SNAPC4Q5SXM2 1469 aa25.19■■□□□ 1.62
PTPN6-204ENST00000456013 SAMD9Q5K651 1589 aa25.13■■□□□ 1.61
PTPN6-204ENST00000456013 LRRIQ1Q96JM4 1722 aa25.12■■□□□ 1.61
PTPN6-204ENST00000456013 CCDC18Q5T9S5 1454 aa25.12■■□□□ 1.61
PTPN6-204ENST00000456013 NESP48681 1621 aa25.12■■□□□ 1.61
PTPN6-204ENST00000456013 HFM1A2PYH4 1435 aa25.1■■□□□ 1.61
PTPN6-204ENST00000456013 PTPN23Q9H3S7 1636 aa25.1■■□□□ 1.61
PTPN6-204ENST00000456013 CCER2I3L3R5 266 aa25.09■■□□□ 1.61
PTPN6-204ENST00000456013 MTUS2Q5JR59 1369 aa25.09■■□□□ 1.61
PTPN6-204ENST00000456013 UACAQ9BZF9 1416 aa25.09■■□□□ 1.61
PTPN6-204ENST00000456013 TSHZ2Q9NRE2 1034 aa25.09■■□□□ 1.61
PTPN6-204ENST00000456013 ABCA5Q8WWZ7 1642 aa25.07■■□□□ 1.6
PTPN6-204ENST00000456013 THOC2Q8NI27 1593 aaKnown RBP25.07■■□□□ 1.6
PTPN6-204ENST00000456013 PTPRKQ15262 1439 aa25.06■■□□□ 1.6
PTPN6-204ENST00000456013 TONSLQ96HA7 1378 aa25.05■■□□□ 1.6
PTPN6-204ENST00000456013 URB2Q14146 1524 aaKnown RBP25.05■■□□□ 1.6
PTPN6-204ENST00000456013 GRIN2BQ13224 1484 aa25.04■■□□□ 1.6
PTPN6-204ENST00000456013 LAMC3Q9Y6N6 1575 aa25.04■■□□□ 1.6
PTPN6-204ENST00000456013 SUPT6HQ7KZ85 1726 aaKnown RBP25.03■■□□□ 1.6
PTPN6-204ENST00000456013 NCOA2Q15596 1464 aa25.02■■□□□ 1.6
PTPN6-204ENST00000456013 MYOM3Q5VTT5 1437 aa25.02■■□□□ 1.6
PTPN6-204ENST00000456013 ANP32CO43423 234 aa25.02■■□□□ 1.6
PTPN6-204ENST00000456013 HIRIP3Q9BW71 556 aaPredicted RBP25.02■■□□□ 1.6
PTPN6-204ENST00000456013 NAIPQ13075 1403 aa25■■□□□ 1.59
PTPN6-204ENST00000456013 EHBP1L1Q8N3D4 1523 aa25■■□□□ 1.59
PTPN6-204ENST00000456013 KIF21AQ7Z4S6 1674 aa24.99■■□□□ 1.59
PTPN6-204ENST00000456013 GAPVD1Q14C86 1478 aa24.97■■□□□ 1.59
PTPN6-204ENST00000456013 FKBP8Q14318 412 aa24.95■■□□□ 1.59
PTPN6-204ENST00000456013 TDRD9Q8NDG6 1382 aaKnown RBP24.94■■□□□ 1.58
PTPN6-204ENST00000456013 ARHGEF11O15085 1522 aa24.93■■□□□ 1.58
PTPN6-204ENST00000456013 UGGT2Q9NYU1 1516 aa24.93■■□□□ 1.58
PTPN6-204ENST00000456013 KDM5BQ9UGL1 1544 aa24.91■■□□□ 1.58
PTPN6-204ENST00000456013 BCANQ96GW7 911 aa24.88■■□□□ 1.57
PTPN6-204ENST00000456013 GCC2Q8IWJ2 1684 aa24.88■■□□□ 1.57
PTPN6-204ENST00000456013 TCOF1Q13428 1488 aaKnown RBP24.86■■□□□ 1.57
PTPN6-204ENST00000456013 MAGI3Q5TCQ9 1506 aa24.86■■□□□ 1.57
PTPN6-204ENST00000456013 NEFLP07196 543 aa24.86■■□□□ 1.57
PTPN6-204ENST00000456013 TRIM52Q96A61 297 aa24.85■■□□□ 1.57
PTPN6-204ENST00000456013 HECW1Q76N89 1606 aa24.84■■□□□ 1.57
PTPN6-204ENST00000456013 PDS5BQ9NTI5 1447 aa24.82■■□□□ 1.56
PTPN6-204ENST00000456013 AKNAQ7Z591 1439 aa24.8■■□□□ 1.56
PTPN6-204ENST00000456013 TARBP1Q13395 1621 aaKnown RBP24.8■■□□□ 1.56
PTPN6-204ENST00000456013 DENND4BO75064 1496 aaPredicted RBP24.76■■□□□ 1.55
PTPN6-204ENST00000456013 PBRM1Q86U86 1689 aa24.74■■□□□ 1.55
PTPN6-204ENST00000456013 RRP7BPQ9NSQ0 103 aa24.73■■□□□ 1.55
PTPN6-204ENST00000456013 MIA2Q96PC5 1412 aa24.72■■□□□ 1.55
PTPN6-204ENST00000456013 EPRSP07814 1512 aaKnown RBP24.72■■□□□ 1.55
PTPN6-204ENST00000456013 ANP32EQ9BTT0 268 aa24.72■■□□□ 1.55
PTPN6-204ENST00000456013 IQGAP2Q13576 1575 aa24.71■■□□□ 1.55
PTPN6-204ENST00000456013 KDM6BO15054 1643 aa24.71■■□□□ 1.55
PTPN6-204ENST00000456013 CHIC2Q9UKJ5 165 aa24.68■■□□□ 1.54
PTPN6-204ENST00000456013 HSPA5P11021 654 aaKnown RBP24.68■■□□□ 1.54
PTPN6-204ENST00000456013 WASHC2AQ641Q2 1341 aa24.67■■□□□ 1.54
PTPN6-204ENST00000456013 WDR62O43379 1518 aa24.65■■□□□ 1.54
PTPN6-204ENST00000456013 ADAMTS12P58397 1594 aa24.64■■□□□ 1.54
PTPN6-204ENST00000456013 CDK13Q14004 1512 aaKnown RBP24.63■■□□□ 1.53
PTPN6-204ENST00000456013 EIF4G2P78344 907 aaKnown RBP eCLIP24.62■■□□□ 1.53
PTPN6-204ENST00000456013 MPHOSPH9Q99550 1183 aa24.62■■□□□ 1.53
PTPN6-204ENST00000456013 HNRNPUQ00839 825 aaKnown RBP eCLIP24.6■■□□□ 1.53
PTPN6-204ENST00000456013 RBM19Q9Y4C8 960 aaKnown RBP24.59■■□□□ 1.53
PTPN6-204ENST00000456013 CNTLNQ9NXG0 1405 aa24.59■■□□□ 1.53
PTPN6-204ENST00000456013 ROCK1Q13464 1354 aa24.55■■□□□ 1.52
PTPN6-204ENST00000456013 L3MBTL2Q969R5 705 aa24.55■■□□□ 1.52
PTPN6-204ENST00000456013 NCOA1Q15788 1441 aa24.54■■□□□ 1.52
PTPN6-204ENST00000456013 DNMT1P26358 1616 aaKnown RBP24.53■■□□□ 1.52
PTPN6-204ENST00000456013 DAPK1P53355 1430 aa24.53■■□□□ 1.52
PTPN6-204ENST00000456013 RPRD2Q5VT52 1461 aaKnown RBP24.52■■□□□ 1.52
PTPN6-204ENST00000456013 ANKRD30BQ9BXX2 1392 aa24.51■■□□□ 1.51
PTPN6-204ENST00000456013 POLR1AO95602 1720 aaPredicted RBP24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms