RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 CCNB3Q8WWL7 1395 aa18.63■□□□□ 0.57
ECHDC1-209ENST00000454591 CTTNBP2Q8WZ74 1663 aa18.63■□□□□ 0.57
ECHDC1-209ENST00000454591 AQRO60306 1485 aaKnown RBP eCLIP18.62■□□□□ 0.57
ECHDC1-209ENST00000454591 RANGAP1P46060 587 aaPredicted RBP18.6■□□□□ 0.57
ECHDC1-209ENST00000454591 LRRC9Q6ZRR7 1453 aa18.59■□□□□ 0.57
ECHDC1-209ENST00000454591 ABCA5Q8WWZ7 1642 aa18.57■□□□□ 0.56
ECHDC1-209ENST00000454591 FYCO1Q9BQS8 1478 aa18.56■□□□□ 0.56
ECHDC1-209ENST00000454591 RAD54L2Q9Y4B4 1467 aa18.56■□□□□ 0.56
ECHDC1-209ENST00000454591 PCF11O94913 1555 aaKnown RBP18.56■□□□□ 0.56
ECHDC1-209ENST00000454591 SCAF1Q9H7N4 1312 aaKnown RBP18.55■□□□□ 0.56
ECHDC1-209ENST00000454591 NESP48681 1621 aa18.55■□□□□ 0.56
ECHDC1-209ENST00000454591 URB2Q14146 1524 aaKnown RBP18.54■□□□□ 0.56
ECHDC1-209ENST00000454591 ACIN1Q9UKV3 1341 aaKnown RBP18.54■□□□□ 0.56
ECHDC1-209ENST00000454591 CASKIN1Q8WXD9 1431 aa18.51■□□□□ 0.55
ECHDC1-209ENST00000454591 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.51■□□□□ 0.55
ECHDC1-209ENST00000454591 CENPBP07199 599 aaPredicted RBP18.49■□□□□ 0.55
ECHDC1-209ENST00000454591 PDS5BQ9NTI5 1447 aa18.48■□□□□ 0.55
ECHDC1-209ENST00000454591 SAMD9Q5K651 1589 aa18.48■□□□□ 0.55
ECHDC1-209ENST00000454591 THOC2Q8NI27 1593 aaKnown RBP18.45■□□□□ 0.54
ECHDC1-209ENST00000454591 KIF21AQ7Z4S6 1674 aa18.44■□□□□ 0.54
ECHDC1-209ENST00000454591 FMN1Q68DA7 1419 aa18.44■□□□□ 0.54
ECHDC1-209ENST00000454591 SNAPC4Q5SXM2 1469 aa18.42■□□□□ 0.54
ECHDC1-209ENST00000454591 TARBP1Q13395 1621 aaKnown RBP18.42■□□□□ 0.54
ECHDC1-209ENST00000454591 PHLDB1Q86UU1 1377 aa18.42■□□□□ 0.54
ECHDC1-209ENST00000454591 NEUROD1Q13562 356 aa18.41■□□□□ 0.54
ECHDC1-209ENST00000454591 GAPVD1Q14C86 1478 aa18.41■□□□□ 0.54
ECHDC1-209ENST00000454591 FHOD3Q2V2M9 1422 aa18.39■□□□□ 0.54
ECHDC1-209ENST00000454591 SETD5Q9C0A6 1442 aa18.39■□□□□ 0.54
ECHDC1-209ENST00000454591 MAPKBP1O60336 1514 aa18.38■□□□□ 0.53
ECHDC1-209ENST00000454591 RAB3GAP2Q9H2M9 1393 aa18.38■□□□□ 0.53
ECHDC1-209ENST00000454591 GRIN2BQ13224 1484 aa18.33■□□□□ 0.52
ECHDC1-209ENST00000454591 PELP1Q8IZL8 1130 aaKnown RBP18.32■□□□□ 0.52
ECHDC1-209ENST00000454591 PBRM1Q86U86 1689 aa18.32■□□□□ 0.52
ECHDC1-209ENST00000454591 LRRIQ1Q96JM4 1722 aa18.31■□□□□ 0.52
ECHDC1-209ENST00000454591 MIER1Q8N108 512 aa18.28■□□□□ 0.52
ECHDC1-209ENST00000454591 FGD6Q6ZV73 1430 aa18.28■□□□□ 0.52
ECHDC1-209ENST00000454591 TDRD9Q8NDG6 1382 aaKnown RBP18.27■□□□□ 0.52
ECHDC1-209ENST00000454591 TIMELESSQ9UNS1 1208 aa18.27■□□□□ 0.51
ECHDC1-209ENST00000454591 EHBP1L1Q8N3D4 1523 aa18.27■□□□□ 0.51
ECHDC1-209ENST00000454591 ARHGEF11O15085 1522 aa18.26■□□□□ 0.51
ECHDC1-209ENST00000454591 ADAMTS12P58397 1594 aa18.25■□□□□ 0.51
ECHDC1-209ENST00000454591 SUPT6HQ7KZ85 1726 aaKnown RBP18.24■□□□□ 0.51
ECHDC1-209ENST00000454591 CCDC18Q5T9S5 1454 aa18.23■□□□□ 0.51
ECHDC1-209ENST00000454591 MRC2Q9UBG0 1479 aa18.23■□□□□ 0.51
ECHDC1-209ENST00000454591 P3H3Q8IVL6 736 aa18.21■□□□□ 0.51
ECHDC1-209ENST00000454591 IQGAP2Q13576 1575 aa18.2■□□□□ 0.5
ECHDC1-209ENST00000454591 UGGT2Q9NYU1 1516 aa18.2■□□□□ 0.5
ECHDC1-209ENST00000454591 MYOM3Q5VTT5 1437 aa18.19■□□□□ 0.5
ECHDC1-209ENST00000454591 HECW1Q76N89 1606 aa18.19■□□□□ 0.5
ECHDC1-209ENST00000454591 HFM1A2PYH4 1435 aa18.19■□□□□ 0.5
ECHDC1-209ENST00000454591 GTF3C3Q9Y5Q9 886 aa18.18■□□□□ 0.5
ECHDC1-209ENST00000454591 NCOA2Q15596 1464 aa18.18■□□□□ 0.5
ECHDC1-209ENST00000454591 MTUS2Q5JR59 1369 aa18.17■□□□□ 0.5
ECHDC1-209ENST00000454591 TCOF1Q13428 1488 aaKnown RBP18.16■□□□□ 0.5
ECHDC1-209ENST00000454591 PTPN23Q9H3S7 1636 aa18.16■□□□□ 0.5
ECHDC1-209ENST00000454591 ITGAEP38570 1179 aa18.15■□□□□ 0.5
ECHDC1-209ENST00000454591 FAM50AQ14320 339 aaKnown RBP18.15■□□□□ 0.5
ECHDC1-209ENST00000454591 WDR62O43379 1518 aa18.15■□□□□ 0.5
ECHDC1-209ENST00000454591 IFT140Q96RY7 1462 aa18.14■□□□□ 0.49
ECHDC1-209ENST00000454591 DNAJC5BQ9UF47 199 aa18.13■□□□□ 0.49
ECHDC1-209ENST00000454591 AKNAQ7Z591 1439 aa18.13■□□□□ 0.49
ECHDC1-209ENST00000454591 UACAQ9BZF9 1416 aa18.12■□□□□ 0.49
ECHDC1-209ENST00000454591 MAGI3Q5TCQ9 1506 aa18.1■□□□□ 0.49
ECHDC1-209ENST00000454591 GCC2Q8IWJ2 1684 aa18.1■□□□□ 0.49
ECHDC1-209ENST00000454591 PTPRKQ15262 1439 aa18.09■□□□□ 0.49
ECHDC1-209ENST00000454591 NAIPQ13075 1403 aa18.07■□□□□ 0.48
ECHDC1-209ENST00000454591 MIA2Q96PC5 1412 aa18.07■□□□□ 0.48
ECHDC1-209ENST00000454591 EPRSP07814 1512 aaKnown RBP18.07■□□□□ 0.48
ECHDC1-209ENST00000454591 ATP1B4Q9UN42 357 aaPredicted RBP18.07■□□□□ 0.48
ECHDC1-209ENST00000454591 KIAA0586Q9BVV6 1533 aa18.04■□□□□ 0.48
ECHDC1-209ENST00000454591 FOXD1Q16676 465 aa18.03■□□□□ 0.48
ECHDC1-209ENST00000454591 KIAA0556O60303 1618 aa18.01■□□□□ 0.47
ECHDC1-209ENST00000454591 PPP1R15AO75807 674 aaPredicted RBP18.01■□□□□ 0.47
ECHDC1-209ENST00000454591 YTHDC1Q96MU7 727 aaKnown RBP17.98■□□□□ 0.47
ECHDC1-209ENST00000454591 DISP1Q96F81 1524 aa17.98■□□□□ 0.47
ECHDC1-209ENST00000454591 SIN3AQ96ST3 1273 aa17.98■□□□□ 0.47
ECHDC1-209ENST00000454591 EIF4G3O43432 1585 aaKnown RBP17.96■□□□□ 0.47
ECHDC1-209ENST00000454591 GRIN2AQ12879 1464 aa17.95■□□□□ 0.46
ECHDC1-209ENST00000454591 KDM5BQ9UGL1 1544 aa17.95■□□□□ 0.46
ECHDC1-209ENST00000454591 ZNF608Q9ULD9 1512 aaPredicted RBP17.95■□□□□ 0.46
ECHDC1-209ENST00000454591 MAGI1Q96QZ7 1491 aaPredicted RBP17.94■□□□□ 0.46
ECHDC1-209ENST00000454591 RAPGEF6Q8TEU7 1601 aa17.93■□□□□ 0.46
ECHDC1-209ENST00000454591 CDK13Q14004 1512 aaKnown RBP17.93■□□□□ 0.46
ECHDC1-209ENST00000454591 ROCK1Q13464 1354 aa17.92■□□□□ 0.46
ECHDC1-209ENST00000454591 DNMT1P26358 1616 aaKnown RBP17.9■□□□□ 0.46
ECHDC1-209ENST00000454591 NUP153P49790 1475 aaKnown RBP17.89■□□□□ 0.46
ECHDC1-209ENST00000454591 TONSLQ96HA7 1378 aa17.89■□□□□ 0.45
ECHDC1-209ENST00000454591 ADCY10Q96PN6 1610 aa17.88■□□□□ 0.45
ECHDC1-209ENST00000454591 DENND4BO75064 1496 aaPredicted RBP17.88■□□□□ 0.45
ECHDC1-209ENST00000454591 SYNJ2O15056 1496 aa17.85■□□□□ 0.45
ECHDC1-209ENST00000454591 ITSN2Q9NZM3 1697 aa17.84■□□□□ 0.45
ECHDC1-209ENST00000454591 KDM6BO15054 1643 aa17.84■□□□□ 0.45
ECHDC1-209ENST00000454591 CEP170Q5SW79 1584 aa17.83■□□□□ 0.44
ECHDC1-209ENST00000454591 DAPK1P53355 1430 aa17.83■□□□□ 0.44
ECHDC1-209ENST00000454591 NUP160Q12769 1436 aa17.83■□□□□ 0.44
ECHDC1-209ENST00000454591 CCER2I3L3R5 266 aa17.81■□□□□ 0.44
ECHDC1-209ENST00000454591 TROQ12816 1431 aaPredicted RBP17.8■□□□□ 0.44
ECHDC1-209ENST00000454591 ABCC5O15440 1437 aa17.78■□□□□ 0.44
ECHDC1-209ENST00000454591 ADGBQ8N7X0 1667 aa17.78■□□□□ 0.44
ECHDC1-209ENST00000454591 CROCC2H7BZ55 1655 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms