RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 LRRC9Q6ZRR7 1453 aa16.25■□□□□ 0.19
SYVN1-204ENST00000449943 KCNH8Q96L42 1107 aa16.25■□□□□ 0.19
SYVN1-204ENST00000449943 SUPT16HQ9Y5B9 1047 aaKnown RBP16.24■□□□□ 0.19
SYVN1-204ENST00000449943 MAPKBP1O60336 1514 aa16.23■□□□□ 0.19
SYVN1-204ENST00000449943 FHOD3Q2V2M9 1422 aa16.22■□□□□ 0.19
SYVN1-204ENST00000449943 DDX10Q13206 875 aaKnown RBP16.21■□□□□ 0.19
SYVN1-204ENST00000449943 FHAD1B1AJZ9 1412 aa16.21■□□□□ 0.18
SYVN1-204ENST00000449943 HIRIP3Q9BW71 556 aaPredicted RBP16.2■□□□□ 0.18
SYVN1-204ENST00000449943 PRDM2Q13029 1718 aa16.19■□□□□ 0.18
SYVN1-204ENST00000449943 RAD54L2Q9Y4B4 1467 aa16.19■□□□□ 0.18
SYVN1-204ENST00000449943 FANCD2Q9BXW9 1451 aa16.18■□□□□ 0.18
SYVN1-204ENST00000449943 PCF11O94913 1555 aaKnown RBP16.18■□□□□ 0.18
SYVN1-204ENST00000449943 MAP3K1Q13233 1512 aa16.17■□□□□ 0.18
SYVN1-204ENST00000449943 WDR97A6NE52 1622 aa16.14■□□□□ 0.17
SYVN1-204ENST00000449943 BCANQ96GW7 911 aa16.11■□□□□ 0.17
SYVN1-204ENST00000449943 CC2D2AQ9P2K1 1620 aa16.1■□□□□ 0.17
SYVN1-204ENST00000449943 NESP48681 1621 aa16.08■□□□□ 0.17
SYVN1-204ENST00000449943 MYT1Q01538 1121 aa16.08■□□□□ 0.17
SYVN1-204ENST00000449943 CFAP43Q8NDM7 1665 aa16.08■□□□□ 0.16
SYVN1-204ENST00000449943 POLA1P09884 1462 aaPredicted RBP16.08■□□□□ 0.16
SYVN1-204ENST00000449943 FYCO1Q9BQS8 1478 aa16.06■□□□□ 0.16
SYVN1-204ENST00000449943 MTUS2Q5JR59 1369 aa16.06■□□□□ 0.16
SYVN1-204ENST00000449943 TOPBP1Q92547 1522 aa16.05■□□□□ 0.16
SYVN1-204ENST00000449943 CASKIN1Q8WXD9 1431 aa16.05■□□□□ 0.16
SYVN1-204ENST00000449943 DNMBPQ6XZF7 1577 aa16.04■□□□□ 0.16
SYVN1-204ENST00000449943 ABCA10Q8WWZ4 1543 aa16.04■□□□□ 0.16
SYVN1-204ENST00000449943 PPP1R15AO75807 674 aaPredicted RBP16.04■□□□□ 0.16
SYVN1-204ENST00000449943 TONSLQ96HA7 1378 aa16.03■□□□□ 0.16
SYVN1-204ENST00000449943 TDRD9Q8NDG6 1382 aaKnown RBP16.02■□□□□ 0.15
SYVN1-204ENST00000449943 FKBP8Q14318 412 aa16.01■□□□□ 0.15
SYVN1-204ENST00000449943 TRIM52Q96A61 297 aa16.01■□□□□ 0.15
SYVN1-204ENST00000449943 EFCAB5A4FU69 1503 aa16.01■□□□□ 0.15
SYVN1-204ENST00000449943 FGD6Q6ZV73 1430 aa16.01■□□□□ 0.15
SYVN1-204ENST00000449943 ANP32CO43423 234 aa16■□□□□ 0.15
SYVN1-204ENST00000449943 FMN1Q68DA7 1419 aa16■□□□□ 0.15
SYVN1-204ENST00000449943 TIMELESSQ9UNS1 1208 aa15.99■□□□□ 0.15
SYVN1-204ENST00000449943 TSHZ2Q9NRE2 1034 aa15.98■□□□□ 0.15
SYVN1-204ENST00000449943 CCDC18Q5T9S5 1454 aa15.98■□□□□ 0.15
SYVN1-204ENST00000449943 AQRO60306 1485 aaKnown RBP eCLIP15.96■□□□□ 0.152e-7■■■■□ 19.3
SYVN1-204ENST00000449943 PTPRKQ15262 1439 aa15.95■□□□□ 0.14
SYVN1-204ENST00000449943 CHIC2Q9UKJ5 165 aa15.95■□□□□ 0.14
SYVN1-204ENST00000449943 CUL7Q14999 1698 aa15.95■□□□□ 0.14
SYVN1-204ENST00000449943 ARID3CA6NKF2 412 aa15.94■□□□□ 0.14
SYVN1-204ENST00000449943 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.94■□□□□ 0.14
SYVN1-204ENST00000449943 CTTNBP2Q8WZ74 1663 aa15.94■□□□□ 0.14
SYVN1-204ENST00000449943 SNAPC4Q5SXM2 1469 aa15.93■□□□□ 0.14
SYVN1-204ENST00000449943 NEFLP07196 543 aa15.93■□□□□ 0.14
SYVN1-204ENST00000449943 RRP7BPQ9NSQ0 103 aa15.93■□□□□ 0.14
SYVN1-204ENST00000449943 URB2Q14146 1524 aaKnown RBP15.91■□□□□ 0.14
SYVN1-204ENST00000449943 NCOA2Q15596 1464 aa15.91■□□□□ 0.14
SYVN1-204ENST00000449943 HFM1A2PYH4 1435 aa15.9■□□□□ 0.14
SYVN1-204ENST00000449943 UACAQ9BZF9 1416 aa15.89■□□□□ 0.13
SYVN1-204ENST00000449943 CCER2I3L3R5 266 aa15.89■□□□□ 0.13
SYVN1-204ENST00000449943 GAPVD1Q14C86 1478 aa15.89■□□□□ 0.13
SYVN1-204ENST00000449943 MYOM3Q5VTT5 1437 aa15.88■□□□□ 0.13
SYVN1-204ENST00000449943 NAIPQ13075 1403 aa15.87■□□□□ 0.13
SYVN1-204ENST00000449943 PTPN23Q9H3S7 1636 aa15.87■□□□□ 0.13
SYVN1-204ENST00000449943 DNAJC5BQ9UF47 199 aa15.85■□□□□ 0.13
SYVN1-204ENST00000449943 GRIN2BQ13224 1484 aa15.84■□□□□ 0.13
SYVN1-204ENST00000449943 FBLN2P98095 1184 aa15.82■□□□□ 0.12
SYVN1-204ENST00000449943 SAMD9Q5K651 1589 aa15.81■□□□□ 0.12
SYVN1-204ENST00000449943 LRRIQ1Q96JM4 1722 aa15.81■□□□□ 0.12
SYVN1-204ENST00000449943 HNRNPUQ00839 825 aaKnown RBP eCLIP15.8■□□□□ 0.12
SYVN1-204ENST00000449943 SUPT6HQ7KZ85 1726 aaKnown RBP15.8■□□□□ 0.12
SYVN1-204ENST00000449943 EHBP1L1Q8N3D4 1523 aa15.8■□□□□ 0.12
SYVN1-204ENST00000449943 FOXD1Q16676 465 aa15.8■□□□□ 0.12
SYVN1-204ENST00000449943 ABCA5Q8WWZ7 1642 aa15.79■□□□□ 0.12
SYVN1-204ENST00000449943 HSPA5P11021 654 aaKnown RBP15.79■□□□□ 0.12
SYVN1-204ENST00000449943 PDS5BQ9NTI5 1447 aa15.78■□□□□ 0.12
SYVN1-204ENST00000449943 LAMC3Q9Y6N6 1575 aa15.78■□□□□ 0.12
SYVN1-204ENST00000449943 MAGI3Q5TCQ9 1506 aa15.77■□□□□ 0.12
SYVN1-204ENST00000449943 IRX6P78412 446 aaPredicted RBP15.76■□□□□ 0.11
SYVN1-204ENST00000449943 UGGT2Q9NYU1 1516 aa15.75■□□□□ 0.11
SYVN1-204ENST00000449943 WASHC2AQ641Q2 1341 aa15.74■□□□□ 0.11
SYVN1-204ENST00000449943 MPHOSPH9Q99550 1183 aa15.73■□□□□ 0.11
SYVN1-204ENST00000449943 MYT1LQ9UL68 1186 aa15.73■□□□□ 0.11
SYVN1-204ENST00000449943 EIF4G2P78344 907 aaKnown RBP eCLIP15.73■□□□□ 0.11
SYVN1-204ENST00000449943 THOC2Q8NI27 1593 aaKnown RBP15.73■□□□□ 0.11
SYVN1-204ENST00000449943 CDK13Q14004 1512 aaKnown RBP15.72■□□□□ 0.11
SYVN1-204ENST00000449943 L3MBTL2Q969R5 705 aa15.71■□□□□ 0.11
SYVN1-204ENST00000449943 KDM5BQ9UGL1 1544 aa15.7■□□□□ 0.1
SYVN1-204ENST00000449943 ANP32EQ9BTT0 268 aa15.7■□□□□ 0.1
SYVN1-204ENST00000449943 KDM6BO15054 1643 aa15.69■□□□□ 0.1
SYVN1-204ENST00000449943 EPRSP07814 1512 aaKnown RBP15.69■□□□□ 0.1
SYVN1-204ENST00000449943 RBM19Q9Y4C8 960 aaKnown RBP15.68■□□□□ 0.1
SYVN1-204ENST00000449943 HECW1Q76N89 1606 aa15.68■□□□□ 0.1
SYVN1-204ENST00000449943 KIF21AQ7Z4S6 1674 aa15.68■□□□□ 0.1
SYVN1-204ENST00000449943 CNGB1Q14028 1251 aaPredicted RBP15.68■□□□□ 0.1
SYVN1-204ENST00000449943 ARHGEF11O15085 1522 aa15.68■□□□□ 0.1
SYVN1-204ENST00000449943 DENND4BO75064 1496 aaPredicted RBP15.67■□□□□ 0.1
SYVN1-204ENST00000449943 TCOF1Q13428 1488 aaKnown RBP15.66■□□□□ 0.1
SYVN1-204ENST00000449943 CCDC184Q52MB2 194 aa15.66■□□□□ 0.1
SYVN1-204ENST00000449943 FAM9BQ8IZU0 186 aa15.66■□□□□ 0.1
SYVN1-204ENST00000449943 ZNF644Q9H582 1327 aaPredicted RBP15.65■□□□□ 0.1
SYVN1-204ENST00000449943 IQGAP2Q13576 1575 aa15.65■□□□□ 0.1
SYVN1-204ENST00000449943 C11orf95C9JLR9 678 aaPredicted RBP15.64■□□□□ 0.09
SYVN1-204ENST00000449943 TARBP1Q13395 1621 aaKnown RBP15.64■□□□□ 0.09
SYVN1-204ENST00000449943 SLC4A1APQ9BWU0 796 aaKnown RBP15.63■□□□□ 0.09
SYVN1-204ENST00000449943 CDK11AQ9UQ88 783 aaPredicted RBP15.63■□□□□ 0.09
SYVN1-204ENST00000449943 POLR3GLQ9BT43 218 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms