RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 DCBLD2Q96PD2 775 aa6.72□□□□□ -1.33
HMGB3P8-201ENST00000449709 MIER1Q8N108 512 aa6.7□□□□□ -1.34
HMGB3P8-201ENST00000449709 IFNLR1Q8IU57 520 aaPredicted RBP6.68□□□□□ -1.34
HMGB3P8-201ENST00000449709 TSPYL2Q9H2G4 693 aaPredicted RBP6.68□□□□□ -1.34
HMGB3P8-201ENST00000449709 MS4A3Q96HJ5 214 aa6.65□□□□□ -1.34
HMGB3P8-201ENST00000449709 PLEKHG5O94827 1062 aa6.64□□□□□ -1.35
HMGB3P8-201ENST00000449709 HAP1P54257 671 aaPredicted RBP6.64□□□□□ -1.35
HMGB3P8-201ENST00000449709 PKD2Q13563 968 aa6.64□□□□□ -1.35
HMGB3P8-201ENST00000449709 PLCD3Q8N3E9 789 aa6.64□□□□□ -1.35
HMGB3P8-201ENST00000449709 RASEFQ8IZ41 740 aa6.63□□□□□ -1.35
HMGB3P8-201ENST00000449709 CCDC61Q9Y6R9 512 aa6.63□□□□□ -1.35
HMGB3P8-201ENST00000449709 PELP1Q8IZL8 1130 aaKnown RBP6.62□□□□□ -1.35
HMGB3P8-201ENST00000449709 DCAF8L2P0C7V8 631 aa6.61□□□□□ -1.35
HMGB3P8-201ENST00000449709 KIF12Q96FN5 646 aa6.59□□□□□ -1.35
HMGB3P8-201ENST00000449709 POTEB2H3BUK9 544 aa6.58□□□□□ -1.36
HMGB3P8-201ENST00000449709 ASTLQ6HA08 431 aaPredicted RBP6.58□□□□□ -1.36
HMGB3P8-201ENST00000449709 VSIG10Q8N0Z9 540 aa6.58□□□□□ -1.36
HMGB3P8-201ENST00000449709 BCANQ96GW7 911 aa6.58□□□□□ -1.36
HMGB3P8-201ENST00000449709 MAP3K13O43283 966 aa6.57□□□□□ -1.36
HMGB3P8-201ENST00000449709 ATMINO43313 823 aaPredicted RBP6.57□□□□□ -1.36
HMGB3P8-201ENST00000449709 TRPC6Q9Y210 931 aa6.57□□□□□ -1.36
HMGB3P8-201ENST00000449709 NUBP1P53384 320 aa6.56□□□□□ -1.36
HMGB3P8-201ENST00000449709 ATN1P54259 1190 aaPredicted RBP6.54□□□□□ -1.36
HMGB3P8-201ENST00000449709 ZBTB47Q9UFB7 747 aaPredicted RBP6.54□□□□□ -1.36
HMGB3P8-201ENST00000449709 METRNQ9UJH8 293 aa6.54□□□□□ -1.36
HMGB3P8-201ENST00000449709 OTUD5Q96G74 571 aa6.53□□□□□ -1.36
HMGB3P8-201ENST00000449709 BMP2KQ9NSY1 1161 aaPredicted RBP6.53□□□□□ -1.36
HMGB3P8-201ENST00000449709 PRKCSHP14314 528 aaPredicted RBP6.52□□□□□ -1.37
HMGB3P8-201ENST00000449709 BBXQ8WY36 941 aaPredicted RBP6.52□□□□□ -1.37
HMGB3P8-201ENST00000449709 SPOCK2Q92563 424 aa6.52□□□□□ -1.37
HMGB3P8-201ENST00000449709 C7P10643 843 aa6.51□□□□□ -1.37
HMGB3P8-201ENST00000449709 SLC39A7Q92504 469 aa6.51□□□□□ -1.37
HMGB3P8-201ENST00000449709 TAOK2Q9UL54 1235 aa6.51□□□□□ -1.37
HMGB3P8-201ENST00000449709 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P8-201ENST00000449709 KDM2AQ9Y2K7 1162 aa6.5□□□□□ -1.37
HMGB3P8-201ENST00000449709 ECM2O94769 699 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P8-201ENST00000449709 POTEJP0CG39 1038 aa6.49□□□□□ -1.37
HMGB3P8-201ENST00000449709 KLHL34Q8N239 644 aa6.49□□□□□ -1.37
HMGB3P8-201ENST00000449709 FAM212AQ96EL1 285 aa6.49□□□□□ -1.37
HMGB3P8-201ENST00000449709 PCDHB13Q9Y5F0 798 aa6.49□□□□□ -1.37
HMGB3P8-201ENST00000449709 TIE1P35590 1138 aa6.48□□□□□ -1.37
HMGB3P8-201ENST00000449709 TTLL13PA6NNM8 815 aa6.47□□□□□ -1.37
HMGB3P8-201ENST00000449709 MYT1Q01538 1121 aa6.47□□□□□ -1.37
HMGB3P8-201ENST00000449709 POTEFA5A3E0 1075 aa6.46□□□□□ -1.38
HMGB3P8-201ENST00000449709 DCAF8Q5TAQ9 597 aa6.46□□□□□ -1.38
HMGB3P8-201ENST00000449709 PAXIP1Q6ZW49 1069 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P8-201ENST00000449709 IFNL1Q8IU54 200 aa6.46□□□□□ -1.38
HMGB3P8-201ENST00000449709 SGIP1Q9BQI5 828 aa6.45□□□□□ -1.38
HMGB3P8-201ENST00000449709 POTEMA6NI47 508 aa6.44□□□□□ -1.38
HMGB3P8-201ENST00000449709 PYGBP11216 843 aa6.44□□□□□ -1.38
HMGB3P8-201ENST00000449709 RGL2O15211 777 aa6.43□□□□□ -1.38
HMGB3P8-201ENST00000449709 CFAP44Q96MT7 982 aa6.43□□□□□ -1.38
HMGB3P8-201ENST00000449709 TRIM35Q9UPQ4 493 aa6.43□□□□□ -1.38
HMGB3P8-201ENST00000449709 COLQQ9Y215 455 aaPredicted RBP6.43□□□□□ -1.38
HMGB3P8-201ENST00000449709 TMEM106CQ9BVX2 250 aa6.42□□□□□ -1.38
HMGB3P8-201ENST00000449709 POTEGQ6S5H5 508 aa6.41□□□□□ -1.38
HMGB3P8-201ENST00000449709 SEC24BO95487 1268 aa6.4□□□□□ -1.38
HMGB3P8-201ENST00000449709 TPRNQ4KMQ1 711 aa6.4□□□□□ -1.38
HMGB3P8-201ENST00000449709 SPRYD3Q8NCJ5 442 aa6.4□□□□□ -1.38
HMGB3P8-201ENST00000449709 MAMSTRQ6ZN01 415 aa6.39□□□□□ -1.39
HMGB3P8-201ENST00000449709 PCDHB8Q9UN66 801 aa6.39□□□□□ -1.39
HMGB3P8-201ENST00000449709 SCUBE2Q9NQ36 999 aa6.38□□□□□ -1.39
HMGB3P8-201ENST00000449709 TSHZ2Q9NRE2 1034 aa6.38□□□□□ -1.39
HMGB3P8-201ENST00000449709 IER5LQ5T953 404 aa6.37□□□□□ -1.39
HMGB3P8-201ENST00000449709 GSE1Q14687 1217 aa6.36□□□□□ -1.39
HMGB3P8-201ENST00000449709 PCDH10Q9P2E7 1040 aa6.34□□□□□ -1.39
HMGB3P8-201ENST00000449709 CHGAP10645 457 aaKnown RBP6.33□□□□□ -1.4
HMGB3P8-201ENST00000449709 IRX5P78411 483 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P8-201ENST00000449709 TTBK1Q5TCY1 1321 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P8-201ENST00000449709 PLCG2P16885 1265 aa6.32□□□□□ -1.4
HMGB3P8-201ENST00000449709 LCE2DQ5TA82 110 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P8-201ENST00000449709 FAM163AQ96GL9 167 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P8-201ENST00000449709 DNAJC5Q9H3Z4 198 aa6.32□□□□□ -1.4
HMGB3P8-201ENST00000449709 CIZ1Q9ULV3 898 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P8-201ENST00000449709 CHRM1P11229 460 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P8-201ENST00000449709 ZNF467Q7Z7K2 595 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P8-201ENST00000449709 TRIM41Q8WV44 630 aa6.3□□□□□ -1.4
HMGB3P8-201ENST00000449709 OCEL1Q9H607 264 aa6.29□□□□□ -1.4
HMGB3P8-201ENST00000449709 PSEN1P49768 467 aa6.28□□□□□ -1.4
HMGB3P8-201ENST00000449709 HS6ST3Q8IZP7 471 aa6.28□□□□□ -1.4
HMGB3P8-201ENST00000449709 SLAIN1Q8ND83 568 aa6.27□□□□□ -1.41
HMGB3P8-201ENST00000449709 PDCD7Q8N8D1 485 aaKnown RBP6.25□□□□□ -1.41
HMGB3P8-201ENST00000449709 GOLGA2Q08379 1002 aa6.24□□□□□ -1.41
HMGB3P8-201ENST00000449709 MKRN3Q13064 507 aaKnown RBP6.24□□□□□ -1.41
HMGB3P8-201ENST00000449709 PDAP1Q13442 181 aaKnown RBP6.24□□□□□ -1.41
HMGB3P8-201ENST00000449709 RNF25Q96BH1 459 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P8-201ENST00000449709 NBR1Q14596 966 aa6.23□□□□□ -1.41
HMGB3P8-201ENST00000449709 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.22□□□□□ -1.41
HMGB3P8-201ENST00000449709 CABP2Q9NPB3 220 aa6.21□□□□□ -1.42
HMGB3P8-201ENST00000449709 ST18O60284 1047 aa6.2□□□□□ -1.42
HMGB3P8-201ENST00000449709 NKX1-1Q15270 411 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P8-201ENST00000449709 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.2□□□□□ -1.42
HMGB3P8-201ENST00000449709 DPY19L2Q6NUT2 758 aa6.19□□□□□ -1.42
HMGB3P8-201ENST00000449709 GTPBP6O43824 516 aaPredicted RBP6.18□□□□□ -1.42
HMGB3P8-201ENST00000449709 RIOK3O14730 519 aaKnown RBP6.17□□□□□ -1.42
HMGB3P8-201ENST00000449709 C3orf67Q6ZVT6 689 aa6.17□□□□□ -1.42
HMGB3P8-201ENST00000449709 ILDR1Q86SU0 546 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P8-201ENST00000449709 L3MBTL3Q96JM7 780 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P8-201ENST00000449709 CDAN1Q8IWY9 1227 aa6.14□□□□□ -1.43
HMGB3P8-201ENST00000449709 EFCAB3Q8N7B9 438 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms