RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 ATAD2BQ9ULI0 1458 aa9.84□□□□□ -0.83
BEST1-202ENST00000449131 TOP2AP11388 1531 aaKnown RBP9.83□□□□□ -0.84
BEST1-202ENST00000449131 FAM9BQ8IZU0 186 aa9.82□□□□□ -0.84
BEST1-202ENST00000449131 UNC13AQ9UPW8 1703 aa9.82□□□□□ -0.84
BEST1-202ENST00000449131 BCL11AQ9H165 835 aa9.82□□□□□ -0.84
BEST1-202ENST00000449131 HAP1P54257 671 aaPredicted RBP9.81□□□□□ -0.84
BEST1-202ENST00000449131 RRP7BPQ9NSQ0 103 aa9.8□□□□□ -0.84
BEST1-202ENST00000449131 RUSC2Q8N2Y8 1516 aa9.8□□□□□ -0.84
BEST1-202ENST00000449131 KIF27Q86VH2 1401 aa9.8□□□□□ -0.84
BEST1-202ENST00000449131 TPRNQ4KMQ1 711 aa9.8□□□□□ -0.84
BEST1-202ENST00000449131 SALL2Q9Y467 1007 aaPredicted RBP9.8□□□□□ -0.84
BEST1-202ENST00000449131 SIN3AQ96ST3 1273 aa9.79□□□□□ -0.84
BEST1-202ENST00000449131 SUPT16HQ9Y5B9 1047 aaKnown RBP9.79□□□□□ -0.84
BEST1-202ENST00000449131 NPM2Q86SE8 214 aaKnown RBP9.77□□□□□ -0.84
BEST1-202ENST00000449131 SMARCA2P51531 1590 aa9.77□□□□□ -0.85
BEST1-202ENST00000449131 DNAJC5BQ9UF47 199 aa9.76□□□□□ -0.85
BEST1-202ENST00000449131 NBR1Q14596 966 aa9.76□□□□□ -0.85
BEST1-202ENST00000449131 KCNH8Q96L42 1107 aa9.75□□□□□ -0.85
BEST1-202ENST00000449131 MRS2Q9HD23 443 aa9.74□□□□□ -0.85
BEST1-202ENST00000449131 KDM2AQ9Y2K7 1162 aa9.74□□□□□ -0.85
BEST1-202ENST00000449131 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.73□□□□□ -0.85
BEST1-202ENST00000449131 EIF4G2P78344 907 aaKnown RBP eCLIP9.73□□□□□ -0.85
BEST1-202ENST00000449131 TSPY4P0CV99 314 aa9.72□□□□□ -0.85
BEST1-202ENST00000449131 TSPY10P0CW01 314 aa9.72□□□□□ -0.85
BEST1-202ENST00000449131 CHMP7Q8WUX9 453 aaPredicted RBP9.72□□□□□ -0.85
BEST1-202ENST00000449131 TMC1Q8TDI8 760 aa9.72□□□□□ -0.85
BEST1-202ENST00000449131 CANXP27824 592 aaKnown RBP9.71□□□□□ -0.85
BEST1-202ENST00000449131 KANK4Q5T7N3 995 aaPredicted RBP9.7□□□□□ -0.86
BEST1-202ENST00000449131 ANP32EQ9BTT0 268 aa9.7□□□□□ -0.86
BEST1-202ENST00000449131 TIMELESSQ9UNS1 1208 aa9.7□□□□□ -0.86
BEST1-202ENST00000449131 CCNB3Q8WWL7 1395 aa9.7□□□□□ -0.86
BEST1-202ENST00000449131 ANP32AP39687 249 aaKnown RBP9.7□□□□□ -0.86
BEST1-202ENST00000449131 VPS8Q8N3P4 1428 aa9.69□□□□□ -0.86
BEST1-202ENST00000449131 EIF4G1Q04637 1599 aaKnown RBP9.69□□□□□ -0.86
BEST1-202ENST00000449131 PODXL2Q9NZ53 605 aa9.69□□□□□ -0.86
BEST1-202ENST00000449131 CHGAP10645 457 aaKnown RBP9.69□□□□□ -0.86
BEST1-202ENST00000449131 CARMIL1Q5VZK9 1371 aa9.67□□□□□ -0.86
BEST1-202ENST00000449131 CUX2O14529 1486 aa9.67□□□□□ -0.86
BEST1-202ENST00000449131 CCDC136Q96JN2 1154 aa9.66□□□□□ -0.86
BEST1-202ENST00000449131 TAOK2Q9UL54 1235 aa9.64□□□□□ -0.87
BEST1-202ENST00000449131 HOMEZQ8IX15 550 aa9.64□□□□□ -0.87
BEST1-202ENST00000449131 TSHZ2Q9NRE2 1034 aa9.64□□□□□ -0.87
BEST1-202ENST00000449131 PLEKHD1A6NEE1 506 aa9.63□□□□□ -0.87
BEST1-202ENST00000449131 CFDP1Q9UEE9 299 aaPredicted RBP9.63□□□□□ -0.87
BEST1-202ENST00000449131 FHAD1B1AJZ9 1412 aa9.62□□□□□ -0.87
BEST1-202ENST00000449131 NEFMP07197 916 aa9.61□□□□□ -0.87
BEST1-202ENST00000449131 RGL3Q3MIN7 710 aa9.61□□□□□ -0.87
BEST1-202ENST00000449131 ARXQ96QS3 562 aa9.61□□□□□ -0.87
BEST1-202ENST00000449131 ZBTB47Q9UFB7 747 aaPredicted RBP9.61□□□□□ -0.87
BEST1-202ENST00000449131 NCAPD3P42695 1498 aa9.6□□□□□ -0.87
BEST1-202ENST00000449131 CADPSQ9ULU8 1353 aa9.6□□□□□ -0.87
BEST1-202ENST00000449131 B4GALNT3Q6L9W6 998 aa9.6□□□□□ -0.87
BEST1-202ENST00000449131 RBM19Q9Y4C8 960 aaKnown RBP9.59□□□□□ -0.87
BEST1-202ENST00000449131 RAPGEF2Q9Y4G8 1499 aa9.59□□□□□ -0.88
BEST1-202ENST00000449131 NPM1P06748 294 aaKnown RBP eCLIP9.58□□□□□ -0.88
BEST1-202ENST00000449131 SETD5Q9C0A6 1442 aa9.58□□□□□ -0.88
BEST1-202ENST00000449131 SYNJ1O43426 1573 aa9.58□□□□□ -0.88
BEST1-202ENST00000449131 WDR43Q15061 677 aaKnown RBP eCLIP9.57□□□□□ -0.88
BEST1-202ENST00000449131 NESP48681 1621 aa9.57□□□□□ -0.88
BEST1-202ENST00000449131 TDRD9Q8NDG6 1382 aaKnown RBP9.56□□□□□ -0.88
BEST1-202ENST00000449131 RAB3GAP2Q9H2M9 1393 aa9.56□□□□□ -0.88
BEST1-202ENST00000449131 CARD11Q9BXL7 1154 aa9.55□□□□□ -0.88
BEST1-202ENST00000449131 STAG3Q9UJ98 1225 aa9.55□□□□□ -0.88
BEST1-202ENST00000449131 CC2D2AQ9P2K1 1620 aa9.55□□□□□ -0.88
BEST1-202ENST00000449131 EIF5BO60841 1220 aaKnown RBP9.55□□□□□ -0.88
BEST1-202ENST00000449131 FOXD1Q16676 465 aa9.54□□□□□ -0.88
BEST1-202ENST00000449131 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.52□□□□□ -0.88
BEST1-202ENST00000449131 SENP3Q9H4L4 574 aaPredicted RBP9.52□□□□□ -0.89
BEST1-202ENST00000449131 ARHGAP35Q9NRY4 1499 aa9.52□□□□□ -0.89
BEST1-202ENST00000449131 ESF1Q9H501 851 aaKnown RBP9.51□□□□□ -0.89
BEST1-202ENST00000449131 FANCD2Q9BXW9 1451 aa9.5□□□□□ -0.89
BEST1-202ENST00000449131 HSPA5P11021 654 aaKnown RBP9.5□□□□□ -0.89
BEST1-202ENST00000449131 RAD54L2Q9Y4B4 1467 aa9.5□□□□□ -0.89
BEST1-202ENST00000449131 CCER2I3L3R5 266 aa9.49□□□□□ -0.89
BEST1-202ENST00000449131 PPP1R15AO75807 674 aaPredicted RBP9.49□□□□□ -0.89
BEST1-202ENST00000449131 C14orf37Q86TY3 774 aa9.49□□□□□ -0.89
BEST1-202ENST00000449131 CFTRP13569 1480 aa9.48□□□□□ -0.89
BEST1-202ENST00000449131 LAS1LQ9Y4W2 734 aaKnown RBP9.48□□□□□ -0.89
BEST1-202ENST00000449131 PEG3Q9GZU2 1588 aa9.48□□□□□ -0.89
BEST1-202ENST00000449131 UPF2Q9HAU5 1272 aaKnown RBP9.48□□□□□ -0.89
BEST1-202ENST00000449131 PPP4R2Q9NY27 417 aa9.48□□□□□ -0.89
BEST1-202ENST00000449131 DHX57Q6P158 1386 aaKnown RBP9.47□□□□□ -0.89
BEST1-202ENST00000449131 DCAF11Q8TEB1 546 aa9.47□□□□□ -0.89
BEST1-202ENST00000449131 FHOD3Q2V2M9 1422 aa9.47□□□□□ -0.89
BEST1-202ENST00000449131 KNSTRNQ9Y448 316 aa9.46□□□□□ -0.89
BEST1-202ENST00000449131 CUX1P39880 1505 aa9.46□□□□□ -0.89
BEST1-202ENST00000449131 FGD5Q6ZNL6 1462 aa9.45□□□□□ -0.9
BEST1-202ENST00000449131 FMN1Q68DA7 1419 aa9.45□□□□□ -0.9
BEST1-202ENST00000449131 MPHOSPH9Q99550 1183 aa9.45□□□□□ -0.9
BEST1-202ENST00000449131 IGF1RP08069 1367 aa9.45□□□□□ -0.9
BEST1-202ENST00000449131 HMGXB3Q12766 1538 aa9.44□□□□□ -0.9
BEST1-202ENST00000449131 PKD2Q13563 968 aa9.44□□□□□ -0.9
BEST1-202ENST00000449131 ERCC6Q03468 1493 aa9.44□□□□□ -0.9
BEST1-202ENST00000449131 HSP90AA1P07900 732 aaKnown RBP9.44□□□□□ -0.9
BEST1-202ENST00000449131 CC2D1BQ5T0F9 858 aaKnown RBP9.44□□□□□ -0.9
BEST1-202ENST00000449131 CDCA8Q53HL2 280 aa9.42□□□□□ -0.9
BEST1-202ENST00000449131 PDS5BQ9NTI5 1447 aa9.42□□□□□ -0.9
BEST1-202ENST00000449131 L3MBTL2Q969R5 705 aa9.42□□□□□ -0.9
BEST1-202ENST00000449131 DEKP35659 375 aaKnown RBP9.41□□□□□ -0.9
BEST1-202ENST00000449131 NEUROD2Q15784 382 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms