RNA–Protein interactions for RNA: ENST00000448775.3

CLMP-201, Transcript of CXADR like membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLMP, Length 5,072 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMP-201ENST00000448775 BECN1Q14457 450 aa24.03■■□□□ 1.44
CLMP-201ENST00000448775 DEKP35659 375 aaKnown RBP24■■□□□ 1.43
CLMP-201ENST00000448775 RTN4Q9NQC3 1192 aaKnown RBP23.98■■□□□ 1.43
CLMP-201ENST00000448775 TRIM44Q96DX7 344 aaPredicted RBP23.97■■□□□ 1.43
CLMP-201ENST00000448775 GOLGA3Q08378 1498 aa23.96■■□□□ 1.43
CLMP-201ENST00000448775 WDR43Q15061 677 aaKnown RBP eCLIP23.95■■□□□ 1.43
CLMP-201ENST00000448775 NACADO15069 1562 aa23.95■■□□□ 1.43
CLMP-201ENST00000448775 TNIKQ9UKE5 1360 aa23.94■■□□□ 1.42
CLMP-201ENST00000448775 TSHZ2Q9NRE2 1034 aa23.92■■□□□ 1.42
CLMP-201ENST00000448775 CHIC2Q9UKJ5 165 aa23.92■■□□□ 1.42
CLMP-201ENST00000448775 LAS1LQ9Y4W2 734 aaKnown RBP23.9■■□□□ 1.42
CLMP-201ENST00000448775 CCER2I3L3R5 266 aa23.83■■□□□ 1.41
CLMP-201ENST00000448775 B4GALNT3Q6L9W6 998 aa23.83■■□□□ 1.41
CLMP-201ENST00000448775 MTUS2Q5JR59 1369 aa23.81■■□□□ 1.4
CLMP-201ENST00000448775 SLC24A1O60721 1099 aa23.79■■□□□ 1.4
CLMP-201ENST00000448775 NAP1L5Q96NT1 182 aaPredicted RBP23.79■■□□□ 1.4
CLMP-201ENST00000448775 WRNQ14191 1432 aaPredicted RBP eCLIP23.78■■□□□ 1.4
CLMP-201ENST00000448775 GOLGA6L22H0YM25 854 aa23.77■■□□□ 1.4
CLMP-201ENST00000448775 TNNT2P45379 298 aaPredicted RBP23.75■■□□□ 1.39
CLMP-201ENST00000448775 CECR2Q9BXF3 1484 aa23.73■■□□□ 1.39
CLMP-201ENST00000448775 BAZ1BQ9UIG0 1483 aaKnown RBP23.72■■□□□ 1.39
CLMP-201ENST00000448775 KDM2AQ9Y2K7 1162 aa23.72■■□□□ 1.39
CLMP-201ENST00000448775 TIMELESSQ9UNS1 1208 aa23.71■■□□□ 1.39
CLMP-201ENST00000448775 SIN3AQ96ST3 1273 aa23.69■■□□□ 1.38
CLMP-201ENST00000448775 CEP164Q9UPV0 1460 aa23.66■■□□□ 1.38
CLMP-201ENST00000448775 RRP7BPQ9NSQ0 103 aa23.66■■□□□ 1.38
CLMP-201ENST00000448775 BAZ1AQ9NRL2 1556 aaPredicted RBP23.65■■□□□ 1.38
CLMP-201ENST00000448775 SENP3-EIF4A1A0A087X0R7 540 aa23.61■■□□□ 1.37
CLMP-201ENST00000448775 MYH16Q9H6N6 1097 aa23.61■■□□□ 1.37
CLMP-201ENST00000448775 CHMP7Q8WUX9 453 aaPredicted RBP23.59■■□□□ 1.37
CLMP-201ENST00000448775 NCLP19338 710 aaKnown RBP23.59■■□□□ 1.37
CLMP-201ENST00000448775 L1TD1Q5T7N2 865 aaKnown RBP23.58■■□□□ 1.37
CLMP-201ENST00000448775 TSPY4P0CV99 314 aa23.57■■□□□ 1.36
CLMP-201ENST00000448775 TSPY10P0CW01 314 aa23.57■■□□□ 1.36
CLMP-201ENST00000448775 RGS3P49796 1198 aa23.57■■□□□ 1.36
CLMP-201ENST00000448775 PTMAP06454 111 aaKnown RBP23.55■■□□□ 1.36
CLMP-201ENST00000448775 CCNB3Q8WWL7 1395 aa23.55■■□□□ 1.36
CLMP-201ENST00000448775 KIF27Q86VH2 1401 aa23.54■■□□□ 1.36
CLMP-201ENST00000448775 CHGAP10645 457 aaKnown RBP23.51■■□□□ 1.35
CLMP-201ENST00000448775 DNTTIP2Q5QJE6 756 aaKnown RBP23.5■■□□□ 1.35
CLMP-201ENST00000448775 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.5■■□□□ 1.35
CLMP-201ENST00000448775 NPM1P06748 294 aaKnown RBP eCLIP23.48■■□□□ 1.35
CLMP-201ENST00000448775 IPO9Q96P70 1041 aaKnown RBP23.46■■□□□ 1.35
CLMP-201ENST00000448775 CARD11Q9BXL7 1154 aa23.44■■□□□ 1.34
CLMP-201ENST00000448775 TCERG1O14776 1098 aaKnown RBP23.43■■□□□ 1.34
CLMP-201ENST00000448775 KNSTRNQ9Y448 316 aa23.42■■□□□ 1.34
CLMP-201ENST00000448775 MROH2BQ7Z745 1585 aa23.41■■□□□ 1.34
CLMP-201ENST00000448775 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.4■■□□□ 1.34
CLMP-201ENST00000448775 CDCA8Q53HL2 280 aa23.4■■□□□ 1.34
CLMP-201ENST00000448775 SOGA1O94964 1423 aa23.38■■□□□ 1.33
CLMP-201ENST00000448775 FTSJ3Q8IY81 847 aaKnown RBP23.38■■□□□ 1.33
CLMP-201ENST00000448775 VPS8Q8N3P4 1428 aa23.37■■□□□ 1.33
CLMP-201ENST00000448775 ESF1Q9H501 851 aaKnown RBP23.35■■□□□ 1.33
CLMP-201ENST00000448775 SETD5Q9C0A6 1442 aa23.35■■□□□ 1.33
CLMP-201ENST00000448775 PNNQ9H307 717 aaKnown RBP23.34■■□□□ 1.33
CLMP-201ENST00000448775 CFAP53Q96M91 514 aa23.33■■□□□ 1.33
CLMP-201ENST00000448775 HSP90AB1P08238 724 aaKnown RBP23.33■■□□□ 1.32
CLMP-201ENST00000448775 FANCIQ9NVI1 1328 aa23.32■■□□□ 1.32
CLMP-201ENST00000448775 STAG3Q9UJ98 1225 aa23.32■■□□□ 1.32
CLMP-201ENST00000448775 USP35Q9P2H5 1018 aa23.32■■□□□ 1.32
CLMP-201ENST00000448775 MSNP26038 577 aaKnown RBP23.31■■□□□ 1.32
CLMP-201ENST00000448775 HSPA5P11021 654 aaKnown RBP23.31■■□□□ 1.32
CLMP-201ENST00000448775 CASC1Q6TDU7 716 aa23.31■■□□□ 1.32
CLMP-201ENST00000448775 PLEKHD1A6NEE1 506 aa23.3■■□□□ 1.32
CLMP-201ENST00000448775 HSCBQ8IWL3 235 aa23.3■■□□□ 1.32
CLMP-201ENST00000448775 RGL3Q3MIN7 710 aa23.28■■□□□ 1.32
CLMP-201ENST00000448775 FRAT1Q92837 279 aaPredicted RBP23.28■■□□□ 1.32
CLMP-201ENST00000448775 CCDC88BA6NC98 1476 aa23.28■■□□□ 1.32
CLMP-201ENST00000448775 MS4A1P11836 297 aa23.26■■□□□ 1.31
CLMP-201ENST00000448775 KCNH8Q96L42 1107 aa23.25■■□□□ 1.31
CLMP-201ENST00000448775 CDK11BP21127 795 aaKnown RBP23.25■■□□□ 1.31
CLMP-201ENST00000448775 RCAN3Q9UKA8 241 aa23.24■■□□□ 1.31
CLMP-201ENST00000448775 NUDCQ9Y266 331 aa23.22■■□□□ 1.31
CLMP-201ENST00000448775 PPP1R15AO75807 674 aaPredicted RBP23.21■■□□□ 1.31
CLMP-201ENST00000448775 NEUROD2Q15784 382 aa23.21■■□□□ 1.31
CLMP-201ENST00000448775 CFDP1Q9UEE9 299 aaPredicted RBP23.21■■□□□ 1.31
CLMP-201ENST00000448775 FHAD1B1AJZ9 1412 aa23.2■■□□□ 1.3
CLMP-201ENST00000448775 ABCC8Q09428 1581 aa23.2■■□□□ 1.3
CLMP-201ENST00000448775 CHMP4BQ9H444 224 aaKnown RBP23.2■■□□□ 1.3
CLMP-201ENST00000448775 RAB3GAP2Q9H2M9 1393 aa23.2■■□□□ 1.3
CLMP-201ENST00000448775 CC2D1BQ5T0F9 858 aaKnown RBP23.2■■□□□ 1.3
CLMP-201ENST00000448775 CUX2O14529 1486 aa23.19■■□□□ 1.3
CLMP-201ENST00000448775 CARMIL1Q5VZK9 1371 aa23.19■■□□□ 1.3
CLMP-201ENST00000448775 RSPH6AQ9H0K4 717 aa23.17■■□□□ 1.3
CLMP-201ENST00000448775 PLCB2Q00722 1185 aa23.16■■□□□ 1.3
CLMP-201ENST00000448775 CHAF1AQ13111 956 aaPredicted RBP23.16■■□□□ 1.3
CLMP-201ENST00000448775 ZRSR1Q15695 479 aaKnown RBP23.15■■□□□ 1.3
CLMP-201ENST00000448775 PTMSP20962 102 aa23.15■■□□□ 1.3
CLMP-201ENST00000448775 KANK4Q5T7N3 995 aaPredicted RBP23.14■■□□□ 1.3
CLMP-201ENST00000448775 ARID4BQ4LE39 1312 aaPredicted RBP23.14■■□□□ 1.29
CLMP-201ENST00000448775 PLPPR3Q6T4P5 718 aa23.14■■□□□ 1.29
CLMP-201ENST00000448775 GOLGA6L3A6NEY3 463 aa23.14■■□□□ 1.29
CLMP-201ENST00000448775 SLKQ9H2G2 1235 aaPredicted RBP23.13■■□□□ 1.29
CLMP-201ENST00000448775 GBP4Q96PP9 640 aa23.13■■□□□ 1.29
CLMP-201ENST00000448775 SPRYD3Q8NCJ5 442 aa23.12■■□□□ 1.29
CLMP-201ENST00000448775 MAPK8IP3Q9UPT6 1336 aa23.1■■□□□ 1.29
CLMP-201ENST00000448775 GZF1Q9H116 711 aaPredicted RBP23.1■■□□□ 1.29
CLMP-201ENST00000448775 TMF1P82094 1093 aa23.08■■□□□ 1.29
CLMP-201ENST00000448775 TPRNQ4KMQ1 711 aa23.08■■□□□ 1.28
CLMP-201ENST00000448775 GSE1Q14687 1217 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms