RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 FGD5Q6ZNL6 1462 aa18.55■□□□□ 0.56
SHC1-210ENST00000448116 KCNH8Q96L42 1107 aa18.53■□□□□ 0.56
SHC1-210ENST00000448116 PHLDB1Q86UU1 1377 aa18.52■□□□□ 0.56
SHC1-210ENST00000448116 ERICH6Q7L0X2 663 aa18.51■□□□□ 0.55
SHC1-210ENST00000448116 SETD5Q9C0A6 1442 aa18.51■□□□□ 0.55
SHC1-210ENST00000448116 DDX10Q13206 875 aaKnown RBP18.5■□□□□ 0.55
SHC1-210ENST00000448116 HIRIP3Q9BW71 556 aaPredicted RBP18.5■□□□□ 0.55
SHC1-210ENST00000448116 SUPT16HQ9Y5B9 1047 aaKnown RBP18.48■□□□□ 0.55
SHC1-210ENST00000448116 TIAM1Q13009 1591 aa18.47■□□□□ 0.55
SHC1-210ENST00000448116 LRRC9Q6ZRR7 1453 aa18.47■□□□□ 0.55
SHC1-210ENST00000448116 FHOD3Q2V2M9 1422 aa18.45■□□□□ 0.54
SHC1-210ENST00000448116 FHAD1B1AJZ9 1412 aa18.44■□□□□ 0.54
SHC1-210ENST00000448116 RAD54L2Q9Y4B4 1467 aa18.43■□□□□ 0.54
SHC1-210ENST00000448116 MAPKBP1O60336 1514 aa18.41■□□□□ 0.54
SHC1-210ENST00000448116 FANCD2Q9BXW9 1451 aa18.4■□□□□ 0.54
SHC1-210ENST00000448116 BCANQ96GW7 911 aa18.36■□□□□ 0.53
SHC1-210ENST00000448116 MAP3K1Q13233 1512 aa18.36■□□□□ 0.53
SHC1-210ENST00000448116 PCF11O94913 1555 aaKnown RBP18.34■□□□□ 0.53
SHC1-210ENST00000448116 WDR97A6NE52 1622 aa18.33■□□□□ 0.53
SHC1-210ENST00000448116 NESP48681 1621 aa18.3■□□□□ 0.52
SHC1-210ENST00000448116 PRDM2Q13029 1718 aa18.3■□□□□ 0.52
SHC1-210ENST00000448116 PPP1R15AO75807 674 aaPredicted RBP18.3■□□□□ 0.52
SHC1-210ENST00000448116 MTUS2Q5JR59 1369 aa18.3■□□□□ 0.52
SHC1-210ENST00000448116 CC2D2AQ9P2K1 1620 aa18.29■□□□□ 0.52
SHC1-210ENST00000448116 POLA1P09884 1462 aaPredicted RBP18.28■□□□□ 0.52
SHC1-210ENST00000448116 TDRD9Q8NDG6 1382 aaKnown RBP18.27■□□□□ 0.52
SHC1-210ENST00000448116 TONSLQ96HA7 1378 aa18.26■□□□□ 0.51
SHC1-210ENST00000448116 TRIM52Q96A61 297 aa18.26■□□□□ 0.51
SHC1-210ENST00000448116 ANP32CO43423 234 aa18.26■□□□□ 0.51
SHC1-210ENST00000448116 FKBP8Q14318 412 aa18.25■□□□□ 0.51
SHC1-210ENST00000448116 TOPBP1Q92547 1522 aa18.25■□□□□ 0.51
SHC1-210ENST00000448116 CASKIN1Q8WXD9 1431 aa18.25■□□□□ 0.51
SHC1-210ENST00000448116 TIMELESSQ9UNS1 1208 aa18.24■□□□□ 0.51
SHC1-210ENST00000448116 ABCA10Q8WWZ4 1543 aa18.23■□□□□ 0.51
SHC1-210ENST00000448116 FYCO1Q9BQS8 1478 aa18.23■□□□□ 0.51
SHC1-210ENST00000448116 CHIC2Q9UKJ5 165 aa18.22■□□□□ 0.51
SHC1-210ENST00000448116 DNMBPQ6XZF7 1577 aa18.21■□□□□ 0.51
SHC1-210ENST00000448116 ARID3CA6NKF2 412 aa18.21■□□□□ 0.51
SHC1-210ENST00000448116 FMN1Q68DA7 1419 aa18.2■□□□□ 0.5
SHC1-210ENST00000448116 FGD6Q6ZV73 1430 aa18.2■□□□□ 0.5
SHC1-210ENST00000448116 TSHZ2Q9NRE2 1034 aa18.19■□□□□ 0.5
SHC1-210ENST00000448116 CFAP43Q8NDM7 1665 aa18.19■□□□□ 0.5
SHC1-210ENST00000448116 RRP7BPQ9NSQ0 103 aa18.19■□□□□ 0.5
SHC1-210ENST00000448116 NEFLP07196 543 aa18.17■□□□□ 0.5
SHC1-210ENST00000448116 EFCAB5A4FU69 1503 aa18.16■□□□□ 0.5
SHC1-210ENST00000448116 CCDC18Q5T9S5 1454 aa18.15■□□□□ 0.5
SHC1-210ENST00000448116 PTPRKQ15262 1439 aa18.14■□□□□ 0.5
SHC1-210ENST00000448116 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.13■□□□□ 0.49
SHC1-210ENST00000448116 AQRO60306 1485 aaKnown RBP eCLIP18.13■□□□□ 0.491e-7■■■■■ 45.2
SHC1-210ENST00000448116 DNAJC5BQ9UF47 199 aa18.11■□□□□ 0.49
SHC1-210ENST00000448116 CCER2I3L3R5 266 aa18.1■□□□□ 0.49
SHC1-210ENST00000448116 URB2Q14146 1524 aaKnown RBP18.09■□□□□ 0.49
SHC1-210ENST00000448116 NCOA2Q15596 1464 aa18.08■□□□□ 0.49
SHC1-210ENST00000448116 GAPVD1Q14C86 1478 aa18.08■□□□□ 0.48
SHC1-210ENST00000448116 CUL7Q14999 1698 aa18.08■□□□□ 0.48
SHC1-210ENST00000448116 UACAQ9BZF9 1416 aa18.08■□□□□ 0.48
SHC1-210ENST00000448116 SNAPC4Q5SXM2 1469 aa18.07■□□□□ 0.48
SHC1-210ENST00000448116 HFM1A2PYH4 1435 aa18.07■□□□□ 0.48
SHC1-210ENST00000448116 MYOM3Q5VTT5 1437 aa18.07■□□□□ 0.48
SHC1-210ENST00000448116 NAIPQ13075 1403 aa18.05■□□□□ 0.48
SHC1-210ENST00000448116 CTTNBP2Q8WZ74 1663 aa18.04■□□□□ 0.48
SHC1-210ENST00000448116 FOXD1Q16676 465 aa18.03■□□□□ 0.48
SHC1-210ENST00000448116 HNRNPUQ00839 825 aaKnown RBP eCLIP18.02■□□□□ 0.48
SHC1-210ENST00000448116 PTPN23Q9H3S7 1636 aa18■□□□□ 0.47
SHC1-210ENST00000448116 HSPA5P11021 654 aaKnown RBP18■□□□□ 0.47
SHC1-210ENST00000448116 PDS5BQ9NTI5 1447 aa17.98■□□□□ 0.47
SHC1-210ENST00000448116 GRIN2BQ13224 1484 aa17.98■□□□□ 0.47
SHC1-210ENST00000448116 IRX6P78412 446 aaPredicted RBP17.97■□□□□ 0.47
SHC1-210ENST00000448116 MPHOSPH9Q99550 1183 aa17.95■□□□□ 0.46
SHC1-210ENST00000448116 EIF4G2P78344 907 aaKnown RBP eCLIP17.95■□□□□ 0.46
SHC1-210ENST00000448116 L3MBTL2Q969R5 705 aa17.93■□□□□ 0.46
SHC1-210ENST00000448116 WASHC2AQ641Q2 1341 aa17.93■□□□□ 0.46
SHC1-210ENST00000448116 LAMC3Q9Y6N6 1575 aa17.93■□□□□ 0.46
SHC1-210ENST00000448116 CNGB1Q14028 1251 aaPredicted RBP17.92■□□□□ 0.46
SHC1-210ENST00000448116 SUPT6HQ7KZ85 1726 aaKnown RBP17.92■□□□□ 0.46
SHC1-210ENST00000448116 SAMD9Q5K651 1589 aa17.92■□□□□ 0.46
SHC1-210ENST00000448116 EHBP1L1Q8N3D4 1523 aa17.92■□□□□ 0.46
SHC1-210ENST00000448116 MAGI3Q5TCQ9 1506 aa17.9■□□□□ 0.46
SHC1-210ENST00000448116 ABCA5Q8WWZ7 1642 aa17.9■□□□□ 0.46
SHC1-210ENST00000448116 LRRIQ1Q96JM4 1722 aa17.89■□□□□ 0.45
SHC1-210ENST00000448116 UGGT2Q9NYU1 1516 aa17.88■□□□□ 0.45
SHC1-210ENST00000448116 FAM9BQ8IZU0 186 aa17.88■□□□□ 0.45
SHC1-210ENST00000448116 RBM19Q9Y4C8 960 aaKnown RBP17.87■□□□□ 0.45
SHC1-210ENST00000448116 ANP32EQ9BTT0 268 aa17.87■□□□□ 0.45
SHC1-210ENST00000448116 CDK13Q14004 1512 aaKnown RBP17.87■□□□□ 0.45
SHC1-210ENST00000448116 ZNF644Q9H582 1327 aaPredicted RBP17.86■□□□□ 0.45
SHC1-210ENST00000448116 CCDC184Q52MB2 194 aa17.86■□□□□ 0.45
SHC1-210ENST00000448116 POLR3GLQ9BT43 218 aa17.85■□□□□ 0.45
SHC1-210ENST00000448116 SLC4A1APQ9BWU0 796 aaKnown RBP17.85■□□□□ 0.45
SHC1-210ENST00000448116 PLEKHG5O94827 1062 aa17.84■□□□□ 0.45
SHC1-210ENST00000448116 EPRSP07814 1512 aaKnown RBP17.84■□□□□ 0.45
SHC1-210ENST00000448116 C11orf95C9JLR9 678 aaPredicted RBP17.84■□□□□ 0.45
SHC1-210ENST00000448116 ZNF326Q5BKZ1 582 aaKnown RBP17.82■□□□□ 0.44
SHC1-210ENST00000448116 ZNF777Q9ULD5 760 aaPredicted RBP17.82■□□□□ 0.44
SHC1-210ENST00000448116 THOC2Q8NI27 1593 aaKnown RBP17.82■□□□□ 0.44
SHC1-210ENST00000448116 MRS2Q9HD23 443 aa17.81■□□□□ 0.44
SHC1-210ENST00000448116 KDM5BQ9UGL1 1544 aa17.81■□□□□ 0.44
SHC1-210ENST00000448116 NBPF8Q3BBV2 869 aa17.81■□□□□ 0.44
SHC1-210ENST00000448116 KDM6BO15054 1643 aa17.8■□□□□ 0.44
SHC1-210ENST00000448116 DENND4BO75064 1496 aaPredicted RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms