RNA–Protein interactions for RNA: ENST00000447726.6

PBX3-207, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene PBX3, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-207ENST00000447726 SETD5Q9C0A6 1442 aa23.58■■□□□ 1.37
PBX3-207ENST00000447726 FAM50AQ14320 339 aaKnown RBP23.58■■□□□ 1.37
PBX3-207ENST00000447726 PRDM2Q13029 1718 aa23.58■■□□□ 1.37
PBX3-207ENST00000447726 KCNH8Q96L42 1107 aa23.57■■□□□ 1.36
PBX3-207ENST00000447726 SIN3AQ96ST3 1273 aa23.55■■□□□ 1.36
PBX3-207ENST00000447726 ATP1B4Q9UN42 357 aaPredicted RBP23.54■■□□□ 1.36
PBX3-207ENST00000447726 MYT1Q01538 1121 aa23.51■■□□□ 1.35
PBX3-207ENST00000447726 FHAD1B1AJZ9 1412 aa23.5■■□□□ 1.35
PBX3-207ENST00000447726 PCF11O94913 1555 aaKnown RBP23.46■■□□□ 1.35
PBX3-207ENST00000447726 WDR97A6NE52 1622 aa23.46■■□□□ 1.35
PBX3-207ENST00000447726 FHOD3Q2V2M9 1422 aa23.44■■□□□ 1.34
PBX3-207ENST00000447726 DDX10Q13206 875 aaKnown RBP23.44■■□□□ 1.34
PBX3-207ENST00000447726 RAD54L2Q9Y4B4 1467 aa23.41■■□□□ 1.34
PBX3-207ENST00000447726 FANCD2Q9BXW9 1451 aa23.4■■□□□ 1.34
PBX3-207ENST00000447726 CFAP43Q8NDM7 1665 aa23.4■■□□□ 1.34
PBX3-207ENST00000447726 HIRIP3Q9BW71 556 aaPredicted RBP23.37■■□□□ 1.33
PBX3-207ENST00000447726 PPP1R15AO75807 674 aaPredicted RBP23.33■■□□□ 1.32
PBX3-207ENST00000447726 FYCO1Q9BQS8 1478 aa23.32■■□□□ 1.32
PBX3-207ENST00000447726 CASKIN1Q8WXD9 1431 aa23.31■■□□□ 1.32
PBX3-207ENST00000447726 TIMELESSQ9UNS1 1208 aa23.31■■□□□ 1.32
PBX3-207ENST00000447726 ABCA10Q8WWZ4 1543 aa23.3■■□□□ 1.32
PBX3-207ENST00000447726 POLA1P09884 1462 aaPredicted RBP23.3■■□□□ 1.32
PBX3-207ENST00000447726 CC2D2AQ9P2K1 1620 aa23.29■■□□□ 1.32
PBX3-207ENST00000447726 TSHZ2Q9NRE2 1034 aa23.28■■□□□ 1.32
PBX3-207ENST00000447726 DNMBPQ6XZF7 1577 aa23.27■■□□□ 1.32
PBX3-207ENST00000447726 TOPBP1Q92547 1522 aa23.27■■□□□ 1.32
PBX3-207ENST00000447726 EFCAB5A4FU69 1503 aa23.26■■□□□ 1.31
PBX3-207ENST00000447726 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.26■■□□□ 1.31
PBX3-207ENST00000447726 AQRO60306 1485 aaKnown RBP eCLIP23.25■■□□□ 1.31
PBX3-207ENST00000447726 FGD6Q6ZV73 1430 aa23.23■■□□□ 1.31
PBX3-207ENST00000447726 NESP48681 1621 aa23.23■■□□□ 1.31
PBX3-207ENST00000447726 BCANQ96GW7 911 aa23.23■■□□□ 1.31
PBX3-207ENST00000447726 PTPRKQ15262 1439 aa23.19■■□□□ 1.3
PBX3-207ENST00000447726 FMN1Q68DA7 1419 aa23.19■■□□□ 1.3
PBX3-207ENST00000447726 MTUS2Q5JR59 1369 aa23.18■■□□□ 1.3
PBX3-207ENST00000447726 FKBP8Q14318 412 aa23.18■■□□□ 1.3
PBX3-207ENST00000447726 SNAPC4Q5SXM2 1469 aa23.17■■□□□ 1.3
PBX3-207ENST00000447726 TONSLQ96HA7 1378 aa23.16■■□□□ 1.3
PBX3-207ENST00000447726 CUL7Q14999 1698 aa23.16■■□□□ 1.3
PBX3-207ENST00000447726 CCDC18Q5T9S5 1454 aa23.16■■□□□ 1.3
PBX3-207ENST00000447726 ANP32CO43423 234 aa23.15■■□□□ 1.3
PBX3-207ENST00000447726 CTTNBP2Q8WZ74 1663 aa23.15■■□□□ 1.3
PBX3-207ENST00000447726 TRIM52Q96A61 297 aa23.14■■□□□ 1.3
PBX3-207ENST00000447726 CCER2I3L3R5 266 aa23.12■■□□□ 1.29
PBX3-207ENST00000447726 HFM1A2PYH4 1435 aa23.12■■□□□ 1.29
PBX3-207ENST00000447726 TDRD9Q8NDG6 1382 aaKnown RBP23.11■■□□□ 1.29
PBX3-207ENST00000447726 UACAQ9BZF9 1416 aa23.1■■□□□ 1.29
PBX3-207ENST00000447726 NCOA2Q15596 1464 aa23.07■■□□□ 1.28
PBX3-207ENST00000447726 NAIPQ13075 1403 aa23.07■■□□□ 1.28
PBX3-207ENST00000447726 PTPN23Q9H3S7 1636 aa23.06■■□□□ 1.28
PBX3-207ENST00000447726 URB2Q14146 1524 aaKnown RBP23.06■■□□□ 1.28
PBX3-207ENST00000447726 MYOM3Q5VTT5 1437 aa23.04■■□□□ 1.28
PBX3-207ENST00000447726 LRRIQ1Q96JM4 1722 aa23.03■■□□□ 1.28
PBX3-207ENST00000447726 SAMD9Q5K651 1589 aa23.02■■□□□ 1.28
PBX3-207ENST00000447726 GRIN2BQ13224 1484 aa23.02■■□□□ 1.28
PBX3-207ENST00000447726 GAPVD1Q14C86 1478 aa22.99■■□□□ 1.27
PBX3-207ENST00000447726 NEFLP07196 543 aa22.99■■□□□ 1.27
PBX3-207ENST00000447726 RRP7BPQ9NSQ0 103 aa22.98■■□□□ 1.27
PBX3-207ENST00000447726 CHIC2Q9UKJ5 165 aa22.96■■□□□ 1.27
PBX3-207ENST00000447726 ABCA5Q8WWZ7 1642 aa22.96■■□□□ 1.27
PBX3-207ENST00000447726 KDM5BQ9UGL1 1544 aa22.95■■□□□ 1.26
PBX3-207ENST00000447726 SUPT6HQ7KZ85 1726 aaKnown RBP22.93■■□□□ 1.26
PBX3-207ENST00000447726 MAGI3Q5TCQ9 1506 aa22.93■■□□□ 1.26
PBX3-207ENST00000447726 EHBP1L1Q8N3D4 1523 aa22.93■■□□□ 1.26
PBX3-207ENST00000447726 UGGT2Q9NYU1 1516 aa22.91■■□□□ 1.26
PBX3-207ENST00000447726 THOC2Q8NI27 1593 aaKnown RBP22.89■■□□□ 1.26
PBX3-207ENST00000447726 LAMC3Q9Y6N6 1575 aa22.89■■□□□ 1.26
PBX3-207ENST00000447726 ANP32EQ9BTT0 268 aa22.88■■□□□ 1.25
PBX3-207ENST00000447726 ARHGEF11O15085 1522 aa22.87■■□□□ 1.25
PBX3-207ENST00000447726 HSPA5P11021 654 aaKnown RBP22.87■■□□□ 1.25
PBX3-207ENST00000447726 DENND4BO75064 1496 aaPredicted RBP22.86■■□□□ 1.25
PBX3-207ENST00000447726 WASHC2AQ641Q2 1341 aa22.86■■□□□ 1.25
PBX3-207ENST00000447726 DNAJC5BQ9UF47 199 aa22.86■■□□□ 1.25
PBX3-207ENST00000447726 HNRNPUQ00839 825 aaKnown RBP eCLIP22.84■■□□□ 1.25
PBX3-207ENST00000447726 ARID3CA6NKF2 412 aa22.83■■□□□ 1.25
PBX3-207ENST00000447726 RBM19Q9Y4C8 960 aaKnown RBP22.81■■□□□ 1.24
PBX3-207ENST00000447726 PDS5BQ9NTI5 1447 aa22.81■■□□□ 1.24
PBX3-207ENST00000447726 TCOF1Q13428 1488 aaKnown RBP22.81■■□□□ 1.24
PBX3-207ENST00000447726 KDM6BO15054 1643 aa22.8■■□□□ 1.24
PBX3-207ENST00000447726 FOXD1Q16676 465 aa22.79■■□□□ 1.24
PBX3-207ENST00000447726 MPHOSPH9Q99550 1183 aa22.78■■□□□ 1.24
PBX3-207ENST00000447726 EIF4G2P78344 907 aaKnown RBP eCLIP22.77■■□□□ 1.24
PBX3-207ENST00000447726 L3MBTL2Q969R5 705 aa22.76■■□□□ 1.23
PBX3-207ENST00000447726 EPRSP07814 1512 aaKnown RBP22.76■■□□□ 1.23
PBX3-207ENST00000447726 CDK13Q14004 1512 aaKnown RBP22.75■■□□□ 1.23
PBX3-207ENST00000447726 GCC2Q8IWJ2 1684 aa22.74■■□□□ 1.23
PBX3-207ENST00000447726 IRX6P78412 446 aaPredicted RBP22.74■■□□□ 1.23
PBX3-207ENST00000447726 HECW1Q76N89 1606 aa22.73■■□□□ 1.23
PBX3-207ENST00000447726 TARBP1Q13395 1621 aaKnown RBP22.73■■□□□ 1.23
PBX3-207ENST00000447726 CCDC184Q52MB2 194 aa22.73■■□□□ 1.23
PBX3-207ENST00000447726 C11orf95C9JLR9 678 aaPredicted RBP22.72■■□□□ 1.23
PBX3-207ENST00000447726 AKNAQ7Z591 1439 aa22.72■■□□□ 1.23
PBX3-207ENST00000447726 KIF21AQ7Z4S6 1674 aa22.72■■□□□ 1.23
PBX3-207ENST00000447726 MIA2Q96PC5 1412 aa22.7■■□□□ 1.22
PBX3-207ENST00000447726 IQGAP2Q13576 1575 aa22.68■■□□□ 1.22
PBX3-207ENST00000447726 CNTLNQ9NXG0 1405 aa22.66■■□□□ 1.22
PBX3-207ENST00000447726 NBPF8Q3BBV2 869 aa22.65■■□□□ 1.22
PBX3-207ENST00000447726 WDR62O43379 1518 aa22.63■■□□□ 1.21
PBX3-207ENST00000447726 ZNF644Q9H582 1327 aaPredicted RBP22.63■■□□□ 1.21
PBX3-207ENST00000447726 CCDC7Q96M83 1385 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms