RNA–Protein interactions for RNA: ENST00000445323.6

MTMR1-208, Transcript of myotubularin related protein 1, humanhuman

TSL 1 (best) BASIC

Gene MTMR1, Length 4,516 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTMR1-208ENST00000445323 SOGA1O94964 1423 aa23.91■■□□□ 1.42
MTMR1-208ENST00000445323 VSIG10Q8N0Z9 540 aa23.88■■□□□ 1.41
MTMR1-208ENST00000445323 MROH2BQ7Z745 1585 aa23.86■■□□□ 1.41
MTMR1-208ENST00000445323 ABCC8Q09428 1581 aa23.83■■□□□ 1.41
MTMR1-208ENST00000445323 ARID4BQ4LE39 1312 aaPredicted RBP23.82■■□□□ 1.4
MTMR1-208ENST00000445323 PKNOX2Q96KN3 472 aa23.82■■□□□ 1.4
MTMR1-208ENST00000445323 CCDC88BA6NC98 1476 aa23.81■■□□□ 1.4
MTMR1-208ENST00000445323 IPO9Q96P70 1041 aaKnown RBP23.8■■□□□ 1.4
MTMR1-208ENST00000445323 TONSLQ96HA7 1378 aa23.79■■□□□ 1.4
MTMR1-208ENST00000445323 ZNF326Q5BKZ1 582 aaKnown RBP23.75■■□□□ 1.39
MTMR1-208ENST00000445323 SIN3AQ96ST3 1273 aa23.72■■□□□ 1.39
MTMR1-208ENST00000445323 DDRGK1Q96HY6 314 aa23.7■■□□□ 1.38
MTMR1-208ENST00000445323 PAK3O75914 559 aaPredicted RBP23.7■■□□□ 1.38
MTMR1-208ENST00000445323 WIZO95785 1651 aa23.68■■□□□ 1.38
MTMR1-208ENST00000445323 CCER2I3L3R5 266 aa23.67■■□□□ 1.38
MTMR1-208ENST00000445323 RUSC2Q8N2Y8 1516 aa23.67■■□□□ 1.38
MTMR1-208ENST00000445323 TNIKQ9UKE5 1360 aa23.65■■□□□ 1.38
MTMR1-208ENST00000445323 UBE2Q2Q8WVN8 375 aa23.62■■□□□ 1.37
MTMR1-208ENST00000445323 CLIP1P30622 1438 aa23.6■■□□□ 1.37
MTMR1-208ENST00000445323 RSPH6AQ9H0K4 717 aa23.59■■□□□ 1.37
MTMR1-208ENST00000445323 BRPF3Q9ULD4 1205 aa23.59■■□□□ 1.37
MTMR1-208ENST00000445323 HSP90AA1P07900 732 aaKnown RBP23.58■■□□□ 1.37
MTMR1-208ENST00000445323 TMC1Q8TDI8 760 aa23.55■■□□□ 1.36
MTMR1-208ENST00000445323 ANP32BQ92688 251 aaKnown RBP23.54■■□□□ 1.36
MTMR1-208ENST00000445323 P3H3Q8IVL6 736 aa23.54■■□□□ 1.36
MTMR1-208ENST00000445323 TRIM44Q96DX7 344 aaPredicted RBP23.54■■□□□ 1.36
MTMR1-208ENST00000445323 HSP90AA2PQ14568 343 aaPredicted RBP23.54■■□□□ 1.36
MTMR1-208ENST00000445323 PNNQ9H307 717 aaKnown RBP23.52■■□□□ 1.36
MTMR1-208ENST00000445323 GSE1Q14687 1217 aa23.51■■□□□ 1.35
MTMR1-208ENST00000445323 PODXL2Q9NZ53 605 aa23.49■■□□□ 1.35
MTMR1-208ENST00000445323 USP35Q9P2H5 1018 aa23.47■■□□□ 1.35
MTMR1-208ENST00000445323 GOLGA3Q08378 1498 aa23.46■■□□□ 1.35
MTMR1-208ENST00000445323 A0A0U1RQG5 324 aaPredicted RBP23.45■■□□□ 1.34
MTMR1-208ENST00000445323 CANXP27824 592 aaKnown RBP23.43■■□□□ 1.34
MTMR1-208ENST00000445323 KANK4Q5T7N3 995 aaPredicted RBP23.43■■□□□ 1.34
MTMR1-208ENST00000445323 UPF2Q9HAU5 1272 aaKnown RBP23.42■■□□□ 1.34
MTMR1-208ENST00000445323 SLC4A3P48751 1232 aa23.41■■□□□ 1.34
MTMR1-208ENST00000445323 ARID3AQ99856 593 aa23.41■■□□□ 1.34
MTMR1-208ENST00000445323 SLC4A1APQ9BWU0 796 aaKnown RBP23.39■■□□□ 1.34
MTMR1-208ENST00000445323 EIF4G2P78344 907 aaKnown RBP eCLIP23.38■■□□□ 1.33
MTMR1-208ENST00000445323 RGS3P49796 1198 aa23.37■■□□□ 1.33
MTMR1-208ENST00000445323 WRNQ14191 1432 aaPredicted RBP eCLIP23.36■■□□□ 1.33
MTMR1-208ENST00000445323 BAZ1BQ9UIG0 1483 aaKnown RBP23.35■■□□□ 1.33
MTMR1-208ENST00000445323 AMER1Q5JTC6 1135 aaPredicted RBP23.33■■□□□ 1.33
MTMR1-208ENST00000445323 BECN1Q14457 450 aa23.31■■□□□ 1.32
MTMR1-208ENST00000445323 DHX57Q6P158 1386 aaKnown RBP23.31■■□□□ 1.32
MTMR1-208ENST00000445323 GZF1Q9H116 711 aaPredicted RBP23.3■■□□□ 1.32
MTMR1-208ENST00000445323 L1TD1Q5T7N2 865 aaKnown RBP23.29■■□□□ 1.32
MTMR1-208ENST00000445323 TNNT2P45379 298 aaPredicted RBP23.27■■□□□ 1.32
MTMR1-208ENST00000445323 ARID3CA6NKF2 412 aa23.27■■□□□ 1.32
MTMR1-208ENST00000445323 TCERG1O14776 1098 aaKnown RBP23.26■■□□□ 1.31
MTMR1-208ENST00000445323 SLKQ9H2G2 1235 aaPredicted RBP23.24■■□□□ 1.31
MTMR1-208ENST00000445323 PDE4AP27815 886 aa23.24■■□□□ 1.31
MTMR1-208ENST00000445323 FRAT1Q92837 279 aaPredicted RBP23.23■■□□□ 1.31
MTMR1-208ENST00000445323 EEA1Q15075 1411 aa23.22■■□□□ 1.31
MTMR1-208ENST00000445323 PLPPR3Q6T4P5 718 aa23.21■■□□□ 1.31
MTMR1-208ENST00000445323 BAZ1AQ9NRL2 1556 aaPredicted RBP23.2■■□□□ 1.31
MTMR1-208ENST00000445323 CEP164Q9UPV0 1460 aa23.19■■□□□ 1.3
MTMR1-208ENST00000445323 NPM1P06748 294 aaKnown RBP eCLIP23.19■■□□□ 1.3
MTMR1-208ENST00000445323 VPS8Q8N3P4 1428 aa23.18■■□□□ 1.3
MTMR1-208ENST00000445323 SPRYD3Q8NCJ5 442 aa23.18■■□□□ 1.3
MTMR1-208ENST00000445323 NFKBIBQ15653 356 aa23.18■■□□□ 1.3
MTMR1-208ENST00000445323 CHIC2Q9UKJ5 165 aa23.14■■□□□ 1.3
MTMR1-208ENST00000445323 ZMYND15Q9H091 742 aa23.14■■□□□ 1.29
MTMR1-208ENST00000445323 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.14■■□□□ 1.29
MTMR1-208ENST00000445323 RAPGEF2Q9Y4G8 1499 aa23.12■■□□□ 1.29
MTMR1-208ENST00000445323 PPP1R15AO75807 674 aaPredicted RBP23.1■■□□□ 1.29
MTMR1-208ENST00000445323 NACADO15069 1562 aa23.1■■□□□ 1.29
MTMR1-208ENST00000445323 CCNB3Q8WWL7 1395 aa23.09■■□□□ 1.29
MTMR1-208ENST00000445323 NUDCQ9Y266 331 aa23.08■■□□□ 1.29
MTMR1-208ENST00000445323 GOLGA6L3A6NEY3 463 aa23.07■■□□□ 1.28
MTMR1-208ENST00000445323 HSPA5P11021 654 aaKnown RBP23.06■■□□□ 1.28
MTMR1-208ENST00000445323 CDK11BP21127 795 aaKnown RBP23.06■■□□□ 1.28
MTMR1-208ENST00000445323 RAB3GAP2Q9H2M9 1393 aa23.06■■□□□ 1.28
MTMR1-208ENST00000445323 DNTTIP2Q5QJE6 756 aaKnown RBP23.05■■□□□ 1.28
MTMR1-208ENST00000445323 NCLP19338 710 aaKnown RBP23.03■■□□□ 1.28
MTMR1-208ENST00000445323 FAM43AQ8N2R8 423 aa23.01■■□□□ 1.27
MTMR1-208ENST00000445323 ZBTB7CA1YPR0 619 aa23.01■■□□□ 1.27
MTMR1-208ENST00000445323 ESF1Q9H501 851 aaKnown RBP23.01■■□□□ 1.27
MTMR1-208ENST00000445323 EXOC6Q8TAG9 804 aa23■■□□□ 1.27
MTMR1-208ENST00000445323 MSNP26038 577 aaKnown RBP23■■□□□ 1.27
MTMR1-208ENST00000445323 RCAN3Q9UKA8 241 aa22.99■■□□□ 1.27
MTMR1-208ENST00000445323 MYH16Q9H6N6 1097 aa22.98■■□□□ 1.27
MTMR1-208ENST00000445323 FRAT2O75474 233 aaPredicted RBP22.98■■□□□ 1.27
MTMR1-208ENST00000445323 TOP2AP11388 1531 aaKnown RBP22.98■■□□□ 1.27
MTMR1-208ENST00000445323 RRP7BPQ9NSQ0 103 aa22.96■■□□□ 1.27
MTMR1-208ENST00000445323 ZBED9Q6R2W3 1325 aa22.94■■□□□ 1.26
MTMR1-208ENST00000445323 PTMAP06454 111 aaKnown RBP22.93■■□□□ 1.26
MTMR1-208ENST00000445323 SMARCA2P51531 1590 aa22.92■■□□□ 1.26
MTMR1-208ENST00000445323 PLEKHG5O94827 1062 aa22.9■■□□□ 1.26
MTMR1-208ENST00000445323 SETD5Q9C0A6 1442 aa22.88■■□□□ 1.25
MTMR1-208ENST00000445323 FAM13BQ9NYF5 915 aa22.88■■□□□ 1.25
MTMR1-208ENST00000445323 GOLGA6L22H0YM25 854 aa22.88■■□□□ 1.25
MTMR1-208ENST00000445323 WDR43Q15061 677 aaKnown RBP eCLIP22.86■■□□□ 1.25
MTMR1-208ENST00000445323 PRKRIP1Q9H875 184 aaPredicted RBP22.86■■□□□ 1.25
MTMR1-208ENST00000445323 KDM2AQ9Y2K7 1162 aa22.86■■□□□ 1.25
MTMR1-208ENST00000445323 PLIN1O60240 522 aa22.85■■□□□ 1.25
MTMR1-208ENST00000445323 CHMP7Q8WUX9 453 aaPredicted RBP22.85■■□□□ 1.25
MTMR1-208ENST00000445323 ZNF777Q9ULD5 760 aaPredicted RBP22.85■■□□□ 1.25
MTMR1-208ENST00000445323 RRP9O43818 475 aaKnown RBP22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms