RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 ECM2O94769 699 aaPredicted RBP6.1□□□□□ -1.43
UBR3-206ENST00000444475 BCL11AQ9H165 835 aa6.1□□□□□ -1.43
UBR3-206ENST00000444475 KCTD17Q8N5Z5 321 aa6.09□□□□□ -1.43
UBR3-206ENST00000444475 ZNF428Q96B54 188 aa6.09□□□□□ -1.43
UBR3-206ENST00000444475 TAF7LQ5H9L4 462 aa6.09□□□□□ -1.44
UBR3-206ENST00000444475 LMOD2Q6P5Q4 547 aa6.08□□□□□ -1.44
UBR3-206ENST00000444475 MTMR7Q9Y216 660 aa6.08□□□□□ -1.44
UBR3-206ENST00000444475 MAPK8IP2Q13387 824 aaPredicted RBP6.08□□□□□ -1.44
UBR3-206ENST00000444475 NEUROD2Q15784 382 aa6.08□□□□□ -1.44
UBR3-206ENST00000444475 TRAIPQ9BWF2 469 aa6.08□□□□□ -1.44
UBR3-206ENST00000444475 RAD21O60216 631 aa6.06□□□□□ -1.44
UBR3-206ENST00000444475 PDE4CQ08493 712 aa6.06□□□□□ -1.44
UBR3-206ENST00000444475 ZNF692Q9BU19 519 aaPredicted RBP6.06□□□□□ -1.44
UBR3-206ENST00000444475 ARID3CA6NKF2 412 aa6.05□□□□□ -1.44
UBR3-206ENST00000444475 ATF5Q9Y2D1 282 aaPredicted RBP6.05□□□□□ -1.44
UBR3-206ENST00000444475 ZC3H15Q8WU90 426 aaKnown RBP6.02□□□□□ -1.45
UBR3-206ENST00000444475 APBB1O00213 710 aa6.01□□□□□ -1.45
UBR3-206ENST00000444475 SLC24A3Q9HC58 644 aa6□□□□□ -1.45
UBR3-206ENST00000444475 FOXD4L5Q5VV16 416 aaPredicted RBP6□□□□□ -1.45
UBR3-206ENST00000444475 FOXD4L4Q8WXT5 416 aaPredicted RBP6□□□□□ -1.45
UBR3-206ENST00000444475 HS6ST3Q8IZP7 471 aa5.99□□□□□ -1.45
UBR3-206ENST00000444475 CHGAP10645 457 aaKnown RBP5.99□□□□□ -1.45
UBR3-206ENST00000444475 FAM177A1Q8N128 213 aaPredicted RBP5.99□□□□□ -1.45
UBR3-206ENST00000444475 NKX1-1Q15270 411 aaPredicted RBP5.99□□□□□ -1.45
UBR3-206ENST00000444475 RNF216Q9NWF9 866 aaPredicted RBP5.99□□□□□ -1.45
UBR3-206ENST00000444475 BCCIPQ9P287 314 aaKnown RBP eCLIP5.98□□□□□ -1.45
UBR3-206ENST00000444475 RBM25P49756 843 aaKnown RBP5.97□□□□□ -1.45
UBR3-206ENST00000444475 SPDYE4A6NLX3 237 aa5.97□□□□□ -1.45
UBR3-206ENST00000444475 MFAP1P55081 439 aaKnown RBP5.97□□□□□ -1.45
UBR3-206ENST00000444475 CCDC82Q8N4S0 544 aa5.97□□□□□ -1.45
UBR3-206ENST00000444475 GTPBP6O43824 516 aaPredicted RBP5.96□□□□□ -1.46
UBR3-206ENST00000444475 SPOCK2Q92563 424 aa5.96□□□□□ -1.46
UBR3-206ENST00000444475 FAM9AQ8IZU1 332 aaPredicted RBP5.96□□□□□ -1.46
UBR3-206ENST00000444475 MKRN3Q13064 507 aaKnown RBP5.95□□□□□ -1.46
UBR3-206ENST00000444475 TMCO4Q5TGY1 634 aa5.93□□□□□ -1.46
UBR3-206ENST00000444475 IGSF5Q9NSI5 407 aa5.93□□□□□ -1.46
UBR3-206ENST00000444475 RSPH4AQ5TD94 716 aa5.93□□□□□ -1.46
UBR3-206ENST00000444475 CCDC125Q86Z20 511 aa5.93□□□□□ -1.46
UBR3-206ENST00000444475 PIAS4Q8N2W9 510 aaPredicted RBP5.93□□□□□ -1.46
UBR3-206ENST00000444475 P3H3Q8IVL6 736 aa5.92□□□□□ -1.46
UBR3-206ENST00000444475 ZMYND10O75800 440 aa5.92□□□□□ -1.46
UBR3-206ENST00000444475 ONECUT3O60422 494 aaPredicted RBP5.92□□□□□ -1.46
UBR3-206ENST00000444475 KCNV2Q8TDN2 545 aa5.92□□□□□ -1.46
UBR3-206ENST00000444475 E9PSI1 815 aa5.91□□□□□ -1.46
UBR3-206ENST00000444475 CC2D2BQ6DHV5 1058 aa5.91□□□□□ -1.46
UBR3-206ENST00000444475 CADPSQ9ULU8 1353 aa5.9□□□□□ -1.46
UBR3-206ENST00000444475 BARGINQ6ZT62 677 aa5.9□□□□□ -1.46
UBR3-206ENST00000444475 BRPF3Q9ULD4 1205 aa5.9□□□□□ -1.46
UBR3-206ENST00000444475 BCL11BQ9C0K0 894 aaPredicted RBP5.9□□□□□ -1.47
UBR3-206ENST00000444475 NEFLP07196 543 aa5.89□□□□□ -1.47
UBR3-206ENST00000444475 TICAM2Q86XR7 235 aa5.89□□□□□ -1.47
UBR3-206ENST00000444475 CERS3Q8IU89 383 aa5.89□□□□□ -1.47
UBR3-206ENST00000444475 FGD1P98174 961 aa5.88□□□□□ -1.47
UBR3-206ENST00000444475 IRF5Q13568 498 aa5.88□□□□□ -1.47
UBR3-206ENST00000444475 GZF1Q9H116 711 aaPredicted RBP5.87□□□□□ -1.47
UBR3-206ENST00000444475 CWC22Q9HCG8 908 aaKnown RBP5.87□□□□□ -1.47
UBR3-206ENST00000444475 ZFP91Q96JP5 570 aaPredicted RBP5.87□□□□□ -1.47
UBR3-206ENST00000444475 A6NJR5 290 aa5.87□□□□□ -1.47
UBR3-206ENST00000444475 TRAK2O60296 914 aa5.87□□□□□ -1.47
UBR3-206ENST00000444475 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.87□□□□□ -1.47
UBR3-206ENST00000444475 AEBP1Q8IUX7 1158 aa5.86□□□□□ -1.47
UBR3-206ENST00000444475 GPBP1L1Q9HC44 474 aaPredicted RBP5.86□□□□□ -1.47
UBR3-206ENST00000444475 AMOTL2Q9Y2J4 779 aa5.86□□□□□ -1.47
UBR3-206ENST00000444475 TMED8Q6PL24 325 aaPredicted RBP5.86□□□□□ -1.47
UBR3-206ENST00000444475 SCAF1Q9H7N4 1312 aaKnown RBP5.86□□□□□ -1.47
UBR3-206ENST00000444475 POLR3GLQ9BT43 218 aa5.86□□□□□ -1.47
UBR3-206ENST00000444475 ZNF592Q92610 1267 aa5.85□□□□□ -1.47
UBR3-206ENST00000444475 USP35Q9P2H5 1018 aa5.85□□□□□ -1.47
UBR3-206ENST00000444475 IL27Q8NEV9 243 aa5.84□□□□□ -1.47
UBR3-206ENST00000444475 MKRN4PQ13434 485 aaPredicted RBP5.83□□□□□ -1.48
UBR3-206ENST00000444475 RNF25Q96BH1 459 aaPredicted RBP5.83□□□□□ -1.48
UBR3-206ENST00000444475 ARIH1Q9Y4X5 557 aaPredicted RBP5.83□□□□□ -1.48
UBR3-206ENST00000444475 CLSTN1O94985 981 aa5.81□□□□□ -1.48
UBR3-206ENST00000444475 RETREG2Q8NC44 543 aa5.81□□□□□ -1.48
UBR3-206ENST00000444475 PRDM16Q9HAZ2 1276 aa5.81□□□□□ -1.48
UBR3-206ENST00000444475 FLIIQ13045 1269 aa5.81□□□□□ -1.48
UBR3-206ENST00000444475 KDM4CQ9H3R0 1056 aa5.81□□□□□ -1.48
UBR3-206ENST00000444475 ZNF316A6NFI3 1004 aaPredicted RBP5.8□□□□□ -1.48
UBR3-206ENST00000444475 TESPA1A2RU30 521 aaPredicted RBP5.79□□□□□ -1.48
UBR3-206ENST00000444475 UNCXA6NJT0 531 aa5.79□□□□□ -1.48
UBR3-206ENST00000444475 PKNOX2Q96KN3 472 aa5.79□□□□□ -1.48
UBR3-206ENST00000444475 CLUAP1Q96AJ1 413 aa5.78□□□□□ -1.48
UBR3-206ENST00000444475 PSMD1Q99460 953 aa5.78□□□□□ -1.48
UBR3-206ENST00000444475 HOXD11P31277 338 aaPredicted RBP5.78□□□□□ -1.48
UBR3-206ENST00000444475 FNBP4Q8N3X1 1017 aaPredicted RBP5.78□□□□□ -1.48
UBR3-206ENST00000444475 CANXP27824 592 aaKnown RBP5.77□□□□□ -1.49
UBR3-206ENST00000444475 PPM1GO15355 546 aaPredicted RBP5.77□□□□□ -1.49
UBR3-206ENST00000444475 CCDC27Q2M243 656 aa5.77□□□□□ -1.49
UBR3-206ENST00000444475 IRX6P78412 446 aaPredicted RBP5.77□□□□□ -1.49
UBR3-206ENST00000444475 WDR70Q9NW82 654 aa5.76□□□□□ -1.49
UBR3-206ENST00000444475 ZC3H4Q9UPT8 1303 aaKnown RBP5.75□□□□□ -1.49
UBR3-206ENST00000444475 PLEKHG3A1L390 1219 aa5.74□□□□□ -1.49
UBR3-206ENST00000444475 CADPS2Q86UW7 1296 aa5.74□□□□□ -1.49
UBR3-206ENST00000444475 SPATA32Q96LK8 384 aa5.74□□□□□ -1.49
UBR3-206ENST00000444475 AK7Q96M32 723 aa5.74□□□□□ -1.49
UBR3-206ENST00000444475 SERPINA10Q9UK55 444 aa5.73□□□□□ -1.49
UBR3-206ENST00000444475 FBXW7Q969H0 707 aa5.72□□□□□ -1.49
UBR3-206ENST00000444475 ARHGEF1Q92888 912 aaKnown RBP5.72□□□□□ -1.49
UBR3-206ENST00000444475 SEMA3EO15041 775 aa5.71□□□□□ -1.49
UBR3-206ENST00000444475 KDM4AO75164 1064 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms