RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 NPM1P06748 294 aaKnown RBP eCLIP9.86□□□□□ -0.83
HMGB3P10-201ENST00000434734 MNX1P50219 401 aaPredicted RBP9.84□□□□□ -0.83
HMGB3P10-201ENST00000434734 EVX2Q03828 476 aa9.84□□□□□ -0.83
HMGB3P10-201ENST00000434734 TMEM132AQ24JP5 1023 aa9.84□□□□□ -0.83
HMGB3P10-201ENST00000434734 CD44P16070 742 aaKnown RBP9.83□□□□□ -0.84
HMGB3P10-201ENST00000434734 ERICH6Q7L0X2 663 aa9.82□□□□□ -0.84
HMGB3P10-201ENST00000434734 MIER1Q8N108 512 aa9.82□□□□□ -0.84
HMGB3P10-201ENST00000434734 PKD2Q13563 968 aa9.81□□□□□ -0.84
HMGB3P10-201ENST00000434734 PAXIP1Q6ZW49 1069 aaPredicted RBP9.8□□□□□ -0.84
HMGB3P10-201ENST00000434734 CLCN6P51797 869 aa9.79□□□□□ -0.84
HMGB3P10-201ENST00000434734 ZBTB47Q9UFB7 747 aaPredicted RBP9.78□□□□□ -0.84
HMGB3P10-201ENST00000434734 PLCD3Q8N3E9 789 aa9.77□□□□□ -0.85
HMGB3P10-201ENST00000434734 CFAP44Q96MT7 982 aa9.77□□□□□ -0.85
HMGB3P10-201ENST00000434734 PAK3O75914 559 aaPredicted RBP9.76□□□□□ -0.85
HMGB3P10-201ENST00000434734 C14orf37Q86TY3 774 aa9.75□□□□□ -0.85
HMGB3P10-201ENST00000434734 BBXQ8WY36 941 aaPredicted RBP9.74□□□□□ -0.85
HMGB3P10-201ENST00000434734 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.74□□□□□ -0.85
HMGB3P10-201ENST00000434734 ZNF579Q8NAF0 562 aaKnown RBP9.73□□□□□ -0.85
HMGB3P10-201ENST00000434734 TSHZ2Q9NRE2 1034 aa9.73□□□□□ -0.85
HMGB3P10-201ENST00000434734 ZRANB1Q9UGI0 708 aa9.72□□□□□ -0.85
HMGB3P10-201ENST00000434734 RANGAP1P46060 587 aaPredicted RBP9.71□□□□□ -0.86
HMGB3P10-201ENST00000434734 IFNLR1Q8IU57 520 aaPredicted RBP9.71□□□□□ -0.86
HMGB3P10-201ENST00000434734 PODXL2Q9NZ53 605 aa9.71□□□□□ -0.86
HMGB3P10-201ENST00000434734 GABBR2O75899 941 aa9.7□□□□□ -0.86
HMGB3P10-201ENST00000434734 VASPP50552 380 aaPredicted RBP9.7□□□□□ -0.86
HMGB3P10-201ENST00000434734 NBR1Q14596 966 aa9.66□□□□□ -0.86
HMGB3P10-201ENST00000434734 NUBP1P53384 320 aa9.6□□□□□ -0.87
HMGB3P10-201ENST00000434734 TSPYL2Q9H2G4 693 aaPredicted RBP9.6□□□□□ -0.87
HMGB3P10-201ENST00000434734 RASEFQ8IZ41 740 aa9.59□□□□□ -0.87
HMGB3P10-201ENST00000434734 CCDC61Q9Y6R9 512 aa9.59□□□□□ -0.87
HMGB3P10-201ENST00000434734 FAM212AQ96EL1 285 aa9.57□□□□□ -0.88
HMGB3P10-201ENST00000434734 PHF12Q96QT6 1004 aa9.57□□□□□ -0.88
HMGB3P10-201ENST00000434734 SUPT5HO00267 1087 aaKnown RBP9.56□□□□□ -0.88
HMGB3P10-201ENST00000434734 KLHL34Q8N239 644 aa9.56□□□□□ -0.88
HMGB3P10-201ENST00000434734 DNAJC5Q9H3Z4 198 aa9.56□□□□□ -0.88
HMGB3P10-201ENST00000434734 SPRYD3Q8NCJ5 442 aa9.55□□□□□ -0.88
HMGB3P10-201ENST00000434734 GALR2O43603 387 aaPredicted RBP9.52□□□□□ -0.89
HMGB3P10-201ENST00000434734 KIF12Q96FN5 646 aa9.51□□□□□ -0.89
HMGB3P10-201ENST00000434734 DCBLD2Q96PD2 775 aa9.51□□□□□ -0.89
HMGB3P10-201ENST00000434734 ECM2O94769 699 aaPredicted RBP9.49□□□□□ -0.89
HMGB3P10-201ENST00000434734 SGIP1Q9BQI5 828 aa9.49□□□□□ -0.89
HMGB3P10-201ENST00000434734 GSE1Q14687 1217 aa9.47□□□□□ -0.89
HMGB3P10-201ENST00000434734 SPOCK2Q92563 424 aa9.47□□□□□ -0.89
HMGB3P10-201ENST00000434734 MS4A3Q96HJ5 214 aa9.47□□□□□ -0.89
HMGB3P10-201ENST00000434734 POTEIP0CG38 1075 aa9.46□□□□□ -0.9
HMGB3P10-201ENST00000434734 DCAF8Q5TAQ9 597 aa9.46□□□□□ -0.9
HMGB3P10-201ENST00000434734 RGL2O15211 777 aa9.44□□□□□ -0.9
HMGB3P10-201ENST00000434734 MAP3K13O43283 966 aa9.44□□□□□ -0.9
HMGB3P10-201ENST00000434734 TRIM26Q12899 539 aaPredicted RBP9.42□□□□□ -0.9
HMGB3P10-201ENST00000434734 UBTFP17480 764 aaKnown RBP9.41□□□□□ -0.9
HMGB3P10-201ENST00000434734 NPM2Q86SE8 214 aaKnown RBP9.41□□□□□ -0.9
HMGB3P10-201ENST00000434734 ASTLQ6HA08 431 aaPredicted RBP9.4□□□□□ -0.9
HMGB3P10-201ENST00000434734 PCDHB13Q9Y5F0 798 aa9.4□□□□□ -0.9
HMGB3P10-201ENST00000434734 CHRM1P11229 460 aaPredicted RBP9.38□□□□□ -0.91
HMGB3P10-201ENST00000434734 TIE1P35590 1138 aa9.38□□□□□ -0.91
HMGB3P10-201ENST00000434734 ATMINO43313 823 aaPredicted RBP9.37□□□□□ -0.91
HMGB3P10-201ENST00000434734 PYGBP11216 843 aa9.36□□□□□ -0.91
HMGB3P10-201ENST00000434734 IFNL1Q8IU54 200 aa9.35□□□□□ -0.91
HMGB3P10-201ENST00000434734 TRIM41Q8WV44 630 aa9.34□□□□□ -0.91
HMGB3P10-201ENST00000434734 BMP2KQ9NSY1 1161 aaPredicted RBP9.33□□□□□ -0.92
HMGB3P10-201ENST00000434734 ZNF467Q7Z7K2 595 aaPredicted RBP9.32□□□□□ -0.92
HMGB3P10-201ENST00000434734 CIZ1Q9ULV3 898 aaPredicted RBP9.32□□□□□ -0.92
HMGB3P10-201ENST00000434734 C7P10643 843 aa9.31□□□□□ -0.92
HMGB3P10-201ENST00000434734 CHGAP10645 457 aaKnown RBP9.31□□□□□ -0.92
HMGB3P10-201ENST00000434734 HRCP23327 699 aa9.31□□□□□ -0.92
HMGB3P10-201ENST00000434734 SLC39A7Q92504 469 aa9.31□□□□□ -0.92
HMGB3P10-201ENST00000434734 ATN1P54259 1190 aaPredicted RBP9.3□□□□□ -0.92
HMGB3P10-201ENST00000434734 LHX8Q68G74 356 aa9.3□□□□□ -0.92
HMGB3P10-201ENST00000434734 PELP1Q8IZL8 1130 aaKnown RBP9.3□□□□□ -0.92
HMGB3P10-201ENST00000434734 TRPC6Q9Y210 931 aa9.3□□□□□ -0.92
HMGB3P10-201ENST00000434734 TTLL13PA6NNM8 815 aa9.29□□□□□ -0.92
HMGB3P10-201ENST00000434734 BRPF1P55201 1214 aaPredicted RBP9.27□□□□□ -0.93
HMGB3P10-201ENST00000434734 METRNQ9UJH8 293 aa9.26□□□□□ -0.93
HMGB3P10-201ENST00000434734 IER5LQ5T953 404 aa9.25□□□□□ -0.93
HMGB3P10-201ENST00000434734 TMEM106CQ9BVX2 250 aa9.25□□□□□ -0.93
HMGB3P10-201ENST00000434734 PCDHB8Q9UN66 801 aa9.25□□□□□ -0.93
HMGB3P10-201ENST00000434734 TRIM35Q9UPQ4 493 aa9.23□□□□□ -0.93
HMGB3P10-201ENST00000434734 PDAP1Q13442 181 aaKnown RBP9.19□□□□□ -0.94
HMGB3P10-201ENST00000434734 PSEN1P49768 467 aa9.17□□□□□ -0.94
HMGB3P10-201ENST00000434734 SEC24BO95487 1268 aa9.16□□□□□ -0.94
HMGB3P10-201ENST00000434734 POTEB2H3BUK9 544 aa9.14□□□□□ -0.95
HMGB3P10-201ENST00000434734 MAMSTRQ6ZN01 415 aa9.14□□□□□ -0.95
HMGB3P10-201ENST00000434734 RIOK3O14730 519 aaKnown RBP9.13□□□□□ -0.95
HMGB3P10-201ENST00000434734 GOLGA2Q08379 1002 aa9.13□□□□□ -0.95
HMGB3P10-201ENST00000434734 HS6ST3Q8IZP7 471 aa9.13□□□□□ -0.95
HMGB3P10-201ENST00000434734 POTEFA5A3E0 1075 aa9.12□□□□□ -0.95
HMGB3P10-201ENST00000434734 LMOD2Q6P5Q4 547 aa9.12□□□□□ -0.95
HMGB3P10-201ENST00000434734 IRX5P78411 483 aaPredicted RBP9.11□□□□□ -0.95
HMGB3P10-201ENST00000434734 COLQQ9Y215 455 aaPredicted RBP9.11□□□□□ -0.95
HMGB3P10-201ENST00000434734 PLCG2P16885 1265 aa9.1□□□□□ -0.95
HMGB3P10-201ENST00000434734 NKX1-1Q15270 411 aaPredicted RBP9.1□□□□□ -0.95
HMGB3P10-201ENST00000434734 NEUROD2Q15784 382 aa9.1□□□□□ -0.95
HMGB3P10-201ENST00000434734 OCEL1Q9H607 264 aa9.1□□□□□ -0.95
HMGB3P10-201ENST00000434734 VGFO15240 615 aaPredicted RBP9.09□□□□□ -0.95
HMGB3P10-201ENST00000434734 MKRN3Q13064 507 aaKnown RBP9.09□□□□□ -0.95
HMGB3P10-201ENST00000434734 RNF25Q96BH1 459 aaPredicted RBP9.09□□□□□ -0.95
HMGB3P10-201ENST00000434734 OTUD5Q96G74 571 aa9.09□□□□□ -0.95
HMGB3P10-201ENST00000434734 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.08□□□□□ -0.96
HMGB3P10-201ENST00000434734 POTEJP0CG39 1038 aa9.07□□□□□ -0.96
HMGB3P10-201ENST00000434734 ARID3AQ99856 593 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms