RNA–Protein interactions for RNA: ENST00000433642.2

BLOC1S3-201, Transcript of biogenesis of lysosomal organelles complex 1 subunit 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene BLOC1S3, Length 2,601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S3-201ENST00000433642 RAD54L2Q9Y4B4 1467 aa27.43■■□□□ 1.98
BLOC1S3-201ENST00000433642 PHLDB1Q86UU1 1377 aa27.42■■□□□ 1.98
BLOC1S3-201ENST00000433642 P3H3Q8IVL6 736 aa27.41■■□□□ 1.98
BLOC1S3-201ENST00000433642 DNMBPQ6XZF7 1577 aa27.4■■□□□ 1.98
BLOC1S3-201ENST00000433642 PCF11O94913 1555 aaKnown RBP27.39■■□□□ 1.98
BLOC1S3-201ENST00000433642 FHAD1B1AJZ9 1412 aa27.39■■□□□ 1.97
BLOC1S3-201ENST00000433642 MAPKBP1O60336 1514 aa27.38■■□□□ 1.97
BLOC1S3-201ENST00000433642 ABCA10Q8WWZ4 1543 aa27.37■■□□□ 1.97
BLOC1S3-201ENST00000433642 POLA1P09884 1462 aaPredicted RBP27.37■■□□□ 1.97
BLOC1S3-201ENST00000433642 CFAP43Q8NDM7 1665 aa27.36■■□□□ 1.97
BLOC1S3-201ENST00000433642 TOPBP1Q92547 1522 aa27.36■■□□□ 1.97
BLOC1S3-201ENST00000433642 NESP48681 1621 aa27.34■■□□□ 1.97
BLOC1S3-201ENST00000433642 FHOD3Q2V2M9 1422 aa27.33■■□□□ 1.97
BLOC1S3-201ENST00000433642 SETD5Q9C0A6 1442 aa27.32■■□□□ 1.96
BLOC1S3-201ENST00000433642 FAM50AQ14320 339 aaKnown RBP27.28■■□□□ 1.96
BLOC1S3-201ENST00000433642 ATP1B4Q9UN42 357 aaPredicted RBP27.28■■□□□ 1.96
BLOC1S3-201ENST00000433642 EFCAB5A4FU69 1503 aa27.23■■□□□ 1.95
BLOC1S3-201ENST00000433642 FYCO1Q9BQS8 1478 aa27.23■■□□□ 1.95
BLOC1S3-201ENST00000433642 BCL11AQ9H165 835 aa27.22■■□□□ 1.95
BLOC1S3-201ENST00000433642 CUL7Q14999 1698 aa27.22■■□□□ 1.95
BLOC1S3-201ENST00000433642 CASKIN1Q8WXD9 1431 aa27.2■■□□□ 1.94
BLOC1S3-201ENST00000433642 CTTNBP2Q8WZ74 1663 aa27.19■■□□□ 1.94
BLOC1S3-201ENST00000433642 AQRO60306 1485 aaKnown RBP eCLIP27.16■■□□□ 1.94
BLOC1S3-201ENST00000433642 SIN3AQ96ST3 1273 aa27.16■■□□□ 1.94
BLOC1S3-201ENST00000433642 URB2Q14146 1524 aaKnown RBP27.15■■□□□ 1.94
BLOC1S3-201ENST00000433642 WDR97A6NE52 1622 aa27.13■■□□□ 1.93
BLOC1S3-201ENST00000433642 SNAPC4Q5SXM2 1469 aa27.08■■□□□ 1.93
BLOC1S3-201ENST00000433642 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.07■■□□□ 1.92
BLOC1S3-201ENST00000433642 LAMC3Q9Y6N6 1575 aa27.07■■□□□ 1.92
BLOC1S3-201ENST00000433642 TDRD9Q8NDG6 1382 aaKnown RBP27.06■■□□□ 1.92
BLOC1S3-201ENST00000433642 FMN1Q68DA7 1419 aa27.06■■□□□ 1.92
BLOC1S3-201ENST00000433642 ABCA5Q8WWZ7 1642 aa27.04■■□□□ 1.92
BLOC1S3-201ENST00000433642 FGD6Q6ZV73 1430 aa27.02■■□□□ 1.92
BLOC1S3-201ENST00000433642 SAMD9Q5K651 1589 aa27■■□□□ 1.91
BLOC1S3-201ENST00000433642 KCNH8Q96L42 1107 aa26.99■■□□□ 1.91
BLOC1S3-201ENST00000433642 LRRIQ1Q96JM4 1722 aa26.98■■□□□ 1.91
BLOC1S3-201ENST00000433642 GAPVD1Q14C86 1478 aa26.98■■□□□ 1.91
BLOC1S3-201ENST00000433642 MTUS2Q5JR59 1369 aa26.96■■□□□ 1.91
BLOC1S3-201ENST00000433642 PTPRKQ15262 1439 aa26.94■■□□□ 1.9
BLOC1S3-201ENST00000433642 DNAJC5BQ9UF47 199 aa26.94■■□□□ 1.9
BLOC1S3-201ENST00000433642 TIMELESSQ9UNS1 1208 aa26.94■■□□□ 1.9
BLOC1S3-201ENST00000433642 GRIN2BQ13224 1484 aa26.91■■□□□ 1.9
BLOC1S3-201ENST00000433642 DDX10Q13206 875 aaKnown RBP26.9■■□□□ 1.9
BLOC1S3-201ENST00000433642 PPP1R15AO75807 674 aaPredicted RBP26.89■■□□□ 1.9
BLOC1S3-201ENST00000433642 SUPT16HQ9Y5B9 1047 aaKnown RBP26.89■■□□□ 1.9
BLOC1S3-201ENST00000433642 PDS5BQ9NTI5 1447 aa26.88■■□□□ 1.89
BLOC1S3-201ENST00000433642 CCDC18Q5T9S5 1454 aa26.87■■□□□ 1.89
BLOC1S3-201ENST00000433642 NCOA2Q15596 1464 aa26.87■■□□□ 1.89
BLOC1S3-201ENST00000433642 HFM1A2PYH4 1435 aa26.86■■□□□ 1.89
BLOC1S3-201ENST00000433642 KIF21AQ7Z4S6 1674 aa26.85■■□□□ 1.89
BLOC1S3-201ENST00000433642 HIRIP3Q9BW71 556 aaPredicted RBP26.85■■□□□ 1.89
BLOC1S3-201ENST00000433642 MYOM3Q5VTT5 1437 aa26.84■■□□□ 1.89
BLOC1S3-201ENST00000433642 PTPN23Q9H3S7 1636 aa26.83■■□□□ 1.89
BLOC1S3-201ENST00000433642 ANP32EQ9BTT0 268 aa26.82■■□□□ 1.88
BLOC1S3-201ENST00000433642 THOC2Q8NI27 1593 aaKnown RBP26.81■■□□□ 1.88
BLOC1S3-201ENST00000433642 TARBP1Q13395 1621 aaKnown RBP26.81■■□□□ 1.88
BLOC1S3-201ENST00000433642 UACAQ9BZF9 1416 aa26.8■■□□□ 1.88
BLOC1S3-201ENST00000433642 NAIPQ13075 1403 aa26.79■■□□□ 1.88
BLOC1S3-201ENST00000433642 SUPT6HQ7KZ85 1726 aaKnown RBP26.79■■□□□ 1.88
BLOC1S3-201ENST00000433642 EHBP1L1Q8N3D4 1523 aa26.78■■□□□ 1.88
BLOC1S3-201ENST00000433642 MAGI3Q5TCQ9 1506 aa26.77■■□□□ 1.88
BLOC1S3-201ENST00000433642 TONSLQ96HA7 1378 aa26.74■■□□□ 1.87
BLOC1S3-201ENST00000433642 UGGT2Q9NYU1 1516 aa26.74■■□□□ 1.87
BLOC1S3-201ENST00000433642 ARHGEF11O15085 1522 aa26.73■■□□□ 1.87
BLOC1S3-201ENST00000433642 PBRM1Q86U86 1689 aa26.67■■□□□ 1.86
BLOC1S3-201ENST00000433642 KDM5BQ9UGL1 1544 aa26.63■■□□□ 1.85
BLOC1S3-201ENST00000433642 IQGAP2Q13576 1575 aa26.62■■□□□ 1.85
BLOC1S3-201ENST00000433642 RRP7BPQ9NSQ0 103 aa26.62■■□□□ 1.85
BLOC1S3-201ENST00000433642 HECW1Q76N89 1606 aa26.62■■□□□ 1.85
BLOC1S3-201ENST00000433642 TCOF1Q13428 1488 aaKnown RBP26.61■■□□□ 1.85
BLOC1S3-201ENST00000433642 CHIC2Q9UKJ5 165 aa26.6■■□□□ 1.85
BLOC1S3-201ENST00000433642 EPRSP07814 1512 aaKnown RBP26.6■■□□□ 1.85
BLOC1S3-201ENST00000433642 ADAMTS12P58397 1594 aa26.6■■□□□ 1.85
BLOC1S3-201ENST00000433642 TSHZ2Q9NRE2 1034 aa26.58■■□□□ 1.85
BLOC1S3-201ENST00000433642 CCER2I3L3R5 266 aa26.57■■□□□ 1.84
BLOC1S3-201ENST00000433642 ANP32CO43423 234 aa26.57■■□□□ 1.84
BLOC1S3-201ENST00000433642 CDK13Q14004 1512 aaKnown RBP26.57■■□□□ 1.84
BLOC1S3-201ENST00000433642 DENND4BO75064 1496 aaPredicted RBP26.56■■□□□ 1.84
BLOC1S3-201ENST00000433642 GCC2Q8IWJ2 1684 aa26.55■■□□□ 1.84
BLOC1S3-201ENST00000433642 KDM6BO15054 1643 aa26.54■■□□□ 1.84
BLOC1S3-201ENST00000433642 WDR62O43379 1518 aa26.53■■□□□ 1.84
BLOC1S3-201ENST00000433642 ARID3CA6NKF2 412 aa26.52■■□□□ 1.84
BLOC1S3-201ENST00000433642 PRKCSHP14314 528 aaPredicted RBP26.49■■□□□ 1.83
BLOC1S3-201ENST00000433642 MRC2Q9UBG0 1479 aa26.48■■□□□ 1.83
BLOC1S3-201ENST00000433642 AKNAQ7Z591 1439 aa26.48■■□□□ 1.83
BLOC1S3-201ENST00000433642 TRIM52Q96A61 297 aa26.47■■□□□ 1.83
BLOC1S3-201ENST00000433642 MIA2Q96PC5 1412 aa26.47■■□□□ 1.83
BLOC1S3-201ENST00000433642 ZNF608Q9ULD9 1512 aaPredicted RBP26.44■■□□□ 1.82
BLOC1S3-201ENST00000433642 FKBP8Q14318 412 aa26.43■■□□□ 1.82
BLOC1S3-201ENST00000433642 BCANQ96GW7 911 aa26.43■■□□□ 1.82
BLOC1S3-201ENST00000433642 MPHOSPH9Q99550 1183 aa26.4■■□□□ 1.82
BLOC1S3-201ENST00000433642 HSPA5P11021 654 aaKnown RBP26.37■■□□□ 1.81
BLOC1S3-201ENST00000433642 DISP1Q96F81 1524 aa26.36■■□□□ 1.81
BLOC1S3-201ENST00000433642 FOXD1Q16676 465 aa26.36■■□□□ 1.81
BLOC1S3-201ENST00000433642 WASHC2AQ641Q2 1341 aa26.36■■□□□ 1.81
BLOC1S3-201ENST00000433642 KIAA0556O60303 1618 aa26.35■■□□□ 1.81
BLOC1S3-201ENST00000433642 IFT140Q96RY7 1462 aa26.34■■□□□ 1.81
BLOC1S3-201ENST00000433642 KIAA0586Q9BVV6 1533 aa26.33■■□□□ 1.81
BLOC1S3-201ENST00000433642 DAPK1P53355 1430 aa26.33■■□□□ 1.81
BLOC1S3-201ENST00000433642 NUP153P49790 1475 aaKnown RBP26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms